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8DAS
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BU of 8das by Molmil
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to two ubiquitin moieties in presence of SUMO-ubiquitin(K48polyUb)-mEOS and ATP, state 1 (intA)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 48, ...
著者Lee, H.G, Lima, C.D.
登録日2022-06-14
公開日2022-11-30
最終更新日2023-01-11
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献SUMO enhances unfolding of SUMO-polyubiquitin-modified substrates by the Ufd1/Npl4/Cdc48 complex.
Proc.Natl.Acad.Sci.USA, 120, 2023
8DAT
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BU of 8dat by Molmil
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to three ubiquitin moieties in presence of SUMO-ubiquitin(K48polyUb)-mEOS and ATP, state 1 (intB)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 48, ...
著者Lee, H.G, Lima, C.D.
登録日2022-06-14
公開日2022-11-30
最終更新日2023-01-11
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献SUMO enhances unfolding of SUMO-polyubiquitin-modified substrates by the Ufd1/Npl4/Cdc48 complex.
Proc.Natl.Acad.Sci.USA, 120, 2023
8DAV
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BU of 8dav by Molmil
Saccharomyces cerevisiae Ufd1/Npl4/Cdc48 complex bound to two ubiquitin moieties and one unfolded ubiquitin in presence of SUMO-ubiquitin(K48polyUb)-mEOS and ATP, state 2 (uC)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 48, ...
著者Lee, H.G, Lima, C.D.
登録日2022-06-14
公開日2022-11-30
最終更新日2023-01-11
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献SUMO enhances unfolding of SUMO-polyubiquitin-modified substrates by the Ufd1/Npl4/Cdc48 complex.
Proc.Natl.Acad.Sci.USA, 120, 2023
1KPS
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BU of 1kps by Molmil
Structural Basis for E2-mediated SUMO conjugation revealed by a complex between ubiquitin conjugating enzyme Ubc9 and RanGAP1
分子名称: Ran-GTPase activating protein 1, SULFATE ION, Ubiquitin-like protein SUMO-1 conjugating enzyme
著者Bernier-Villamor, V, Sampson, D.A, Matunis, M.J, Lima, C.D.
登録日2002-01-02
公開日2002-02-13
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for E2-mediated SUMO conjugation revealed by a complex between ubiquitin-conjugating enzyme Ubc9 and RanGAP1.
Cell(Cambridge,Mass.), 108, 2002
1LA2
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BU of 1la2 by Molmil
Structural analysis of Saccharomyces cerevisiae myo-inositol phosphate synthase
分子名称: Myo-inositol-1-phosphate synthase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Kniewel, R, Buglino, J.A, Shen, V, Chadna, T, Beckwith, A, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2002-03-27
公開日2002-04-10
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural analysis of Saccharomyces cerevisiae myo-inositol phosphate synthase
J.STRUCT.FUNCT.GENOM., 2, 2002
1LNZ
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BU of 1lnz by Molmil
Structure of the Obg GTP-binding protein
分子名称: GUANOSINE-5',3'-TETRAPHOSPHATE, MAGNESIUM ION, SPO0B-associated GTP-binding protein
著者Buglino, J, Shen, V, Hakimian, P, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2002-05-04
公開日2002-09-16
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and biochemical analysis of the Obg GTP binding protein
Structure, 10, 2002
1LX7
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BU of 1lx7 by Molmil
Structure of E. coli uridine phosphorylase at 2.0A
分子名称: uridine phosphorylase
著者Burling, T, Buglino, J.A, Kniewel, R, Chadna, T, Beckwith, A, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2002-06-04
公開日2002-06-12
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of Escherichia coli uridine phosphorylase at 2.0 A.
Acta Crystallogr.,Sect.D, 59, 2003
1KNC
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BU of 1knc by Molmil
Structure of AhpD from Mycobacterium tuberculosis, a novel enzyme with thioredoxin-like activity.
分子名称: AhpD protein, SULFATE ION
著者Bryk, R, Lima, C.D, Erdjument-Bromage, H, Tempst, P, Nathan, C.
登録日2001-12-18
公開日2002-01-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Metabolic enzymes of mycobacteria linked to antioxidant defense by a thioredoxin-like protein.
Science, 295, 2002
1LY1
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BU of 1ly1 by Molmil
Structure and Mechanism of T4 Polynucleotide Kinase
分子名称: SULFATE ION, polynucleotide kinase
著者Wang, L.K, Lima, C.D, Shuman, S.
登録日2002-06-06
公開日2002-07-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and mechanism of T4 polynucleotide kinase: an RNA repair enzyme.
EMBO J., 21, 2002
1PSW
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BU of 1psw by Molmil
Structure of E. coli ADP-heptose lps heptosyltransferase II
分子名称: ADP-HEPTOSE LPS HEPTOSYLTRANSFERASE II
著者Kniewel, R, Buglino, J, Solorzano, V, Wu, J, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2003-06-21
公開日2003-07-08
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of E. coli ADP-heptose lps heptosyltransferase II
To be Published
1NI5
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BU of 1ni5 by Molmil
Structure of the MesJ PP-ATPase from Escherichia Coli
分子名称: Putative cell cycle protein mesJ
著者Gu, M, Burling, T, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2002-12-21
公開日2003-01-07
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure of the MesJ PP-ATPase from Escherichia coli
To be Published
1PSU
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BU of 1psu by Molmil
Structure of the E. coli PaaI protein from the phyenylacetic acid degradation operon
分子名称: Phenylacetic acid degradation protein PaaI
著者Kniewel, R, Buglino, J, Solorzano, V, Wu, J, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2003-06-21
公開日2003-07-08
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure, function, and mechanism of the phenylacetate pathway hot dog-fold thioesterase PaaI.
J.Biol.Chem., 281, 2006
1PUI
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BU of 1pui by Molmil
Structure of EngB GTPase
分子名称: Probable GTP-binding protein engB, SULFATE ION
著者Kniewel, R, Buglino, J, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2003-06-24
公開日2003-07-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of an EngB GTPase
To be Published
1PSQ
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BU of 1psq by Molmil
Structure of a probable thiol peroxidase from Streptococcus pneumoniae
分子名称: probable thiol peroxidase
著者Kniewel, R, Buglino, J, Solorzano, V, Wu, J, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2003-06-21
公開日2003-07-08
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of a probable thiol peroxidase from Streptococcus pneumoniae
To be Published
1P1L
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BU of 1p1l by Molmil
Structure of the Periplasmic divalent cation tolerance protein CutA from Archaeoglobus fulgidus
分子名称: Periplasmic divalent cation tolerance protein CUTA
著者Kniewel, R, Buglino, J.A, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2003-04-12
公開日2003-04-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the Periplasmic divalent cation tolerance protein CutA from Archaeoglobus fulgidus
To be Published, 2003
1NI3
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BU of 1ni3 by Molmil
Structure of the Schizosaccharomyces pombe YchF GTPase
分子名称: SULFATE ION, YchF GTP-binding protein
著者Kniewel, R.K, Buglino, J.A, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2002-12-20
公開日2003-01-07
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the S. pombe YchF GTP-binding protein
To be Published
1Q98
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BU of 1q98 by Molmil
Structure of a Thiol Peroxidase from Haemophilus influenzae Rd
分子名称: Thiol Peroxidase
著者Kniewel, R, Buglino, J, Solorzano, V, Wu, J, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2003-08-22
公開日2003-09-09
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of a Thiol Peroxidase from Haemophilus influenzae Rd
To be Published
1P16
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BU of 1p16 by Molmil
Structure of an mRNA capping enzyme bound to the phosphorylated carboxyl-terminal domain of RNA polymerase II
分子名称: GUANOSINE-5'-MONOPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, ...
著者Fabrega, C, Shen, V, Shuman, S, Lima, C.D.
登録日2003-04-11
公開日2003-07-15
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of an mRNA capping enzyme bound to the phosphorylated carboxy-terminal domain of RNA polymerase II.
Mol.Cell, 11, 2003
1P1M
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BU of 1p1m by Molmil
Structure of Thermotoga maritima amidohydrolase TM0936 bound to Ni and methionine
分子名称: Hypothetical protein TM0936, METHIONINE, NICKEL (II) ION
著者Kniewel, R, Buglino, J.A, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2003-04-12
公開日2003-04-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the hypothetical protein TM0936 from Thermotoga maritima at 1.5A bound to Ni and methionine
To be Published, 2003
1Q9J
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BU of 1q9j by Molmil
Structure of polyketide synthase associated protein 5 from Mycobacterium tuberculosis
分子名称: Polyketide synthase associated protein 5
著者Buglino, J, Onwueme, K.C, Quadri, L.E, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2003-08-25
公開日2004-05-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal Structure of PapA5, a Phthiocerol Dimycocerosyl Transferase from Mycobacterium tuberculosis
J.Biol.Chem., 279, 2004
1PUG
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BU of 1pug by Molmil
Structure of E. coli Ybab
分子名称: Hypothetical UPF0133 protein ybaB
著者Kniewel, R, Buglino, J, Chadna, T, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2003-06-24
公開日2003-07-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of E. coli Ybab
To be Published
1PUJ
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BU of 1puj by Molmil
Structure of B. subtilis YlqF GTPase
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, conserved hypothetical protein ylqF
著者Kniewel, R, Buglino, J, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2003-06-24
公開日2003-07-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the YlqF GTPase from B. subtilis
To be Published
1RI1
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BU of 1ri1 by Molmil
Structure and mechanism of mRNA cap (guanine N-7) methyltransferase
分子名称: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, S-ADENOSYL-L-HOMOCYSTEINE, mRNA CAPPING ENZYME
著者Fabrega, C, Hausmann, S, Shen, V, Shuman, S, Lima, C.D.
登録日2003-11-16
公開日2004-02-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and mechanism of mRNA cap (Guanine-n7) methyltransferase
Mol.Cell, 13, 2004
1RI3
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BU of 1ri3 by Molmil
Structure and mechanism of mRNA cap (guanine N-7) methyltransferase
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, mRNA CAPPING ENZYME
著者Fabrega, C, Hausmann, S, Shen, V, Shuman, S, Lima, C.D.
登録日2003-11-16
公開日2004-02-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and mechanism of mRNA cap (Guanine-n7) methyltransferase
Mol.Cell, 13, 2004
2GRO
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BU of 2gro by Molmil
Crystal Structure of human RanGAP1-Ubc9-N85Q
分子名称: Ran GTPase-activating protein 1, Ubiquitin-conjugating enzyme E2 I
著者Yunus, A.A, Lima, C.D.
登録日2006-04-24
公開日2006-05-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Lysine activation and functional analysis of E2-mediated conjugation in the SUMO pathway.
Nat.Struct.Mol.Biol., 13, 2006

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