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5MDS
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BU of 5mds by Molmil
Crystal structure of outer membrane expressed Chitoporin VhChip from Vibrio harveyi in complex with chitotetraose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitoporin
著者Zahn, M, van den Berg, B.
登録日2016-11-13
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for chitin acquisition by marine Vibrio species.
Nat Commun, 9, 2018
6EUS
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BU of 6eus by Molmil
Crystal structure of the outer membrane channel DcaP of Acinetobacter baumannii
分子名称: DcaP-like protein
著者Zahn, M, van den Berg, B.
登録日2017-10-31
公開日2018-11-14
最終更新日2019-06-19
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Multidisciplinary Approach toward Identification of Antibiotic Scaffolds for Acinetobacter baumannii.
Structure, 27, 2019
6Z8R
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BU of 6z8r by Molmil
Copper transporter OprC
分子名称: COPPER (II) ION, Putative copper transport outer membrane porin OprC
著者Bhamidimarri, S.P, van den Berg, B.
登録日2020-06-02
公開日2021-06-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6Z8U
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BU of 6z8u by Molmil
Copper transporter OprC
分子名称: Putative copper transport outer membrane porin OprC, SILVER ION
著者Bhamidimarri, S.P, van den Berg, B.
登録日2020-06-02
公開日2021-06-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6Z8S
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BU of 6z8s by Molmil
Copper transporter OprC
分子名称: COPPER (I) ION, Putative copper transport outer membrane porin OprC
著者Bhamidimarri, S.P, van den Berg, B.
登録日2020-06-02
公開日2021-06-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6Z8Z
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BU of 6z8z by Molmil
Copper transporter OprC
分子名称: Putative copper transport outer membrane porin OprC
著者Bhamidimarri, S.P, van den Berg, B.
登録日2020-06-02
公開日2021-06-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6Z8Q
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BU of 6z8q by Molmil
Copper transporter OprC
分子名称: Putative copper transport outer membrane porin OprC, SILVER ION
著者Bhamidimarri, S.P, van den Berg, B.
登録日2020-06-02
公開日2021-06-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6Z8T
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BU of 6z8t by Molmil
Copper transporter OprC
分子名称: Putative copper transport outer membrane porin OprC, SILVER ION
著者Bhamidimarri, S.P, van den Berg, B.
登録日2020-06-02
公開日2021-06-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6Z8Y
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BU of 6z8y by Molmil
Copper transporter OprC
分子名称: Putative copper transport outer membrane porin OprC
著者Bhamidimarri, S.P, van den Berg, B.
登録日2020-06-02
公開日2021-06-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6Z9N
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BU of 6z9n by Molmil
Copper transporter OprC
分子名称: COPPER (II) ION, Putative copper transport outer membrane porin OprC
著者Bhamidimarri, S.P, van den Berg, B.
登録日2020-06-04
公開日2021-06-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6Z91
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BU of 6z91 by Molmil
Copper transporter OprC
分子名称: Putative copper transport outer membrane porin OprC, SILVER ION
著者Bhamidimarri, S.P, van den Berg, B.
登録日2020-06-03
公開日2021-06-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6Z9Y
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BU of 6z9y by Molmil
Copper transporter OprC
分子名称: COPPER (II) ION, Putative copper transport outer membrane porin OprC
著者Bhamidimarri, S.P, van den Berg, B.
登録日2020-06-04
公開日2021-06-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6Z99
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BU of 6z99 by Molmil
Copper transporter OprC
分子名称: Putative copper transport outer membrane porin OprC, SILVER ION
著者Bhamidimarri, S.P, van den Berg, B.
登録日2020-06-03
公開日2021-06-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
8BLW
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BU of 8blw by Molmil
Vitamin B12 transporter BtuB1 with lipoprotein BtuG1 from B. theta
分子名称: Vitamin B12 transporter BtuB1, YncE family protein, beta-D-galactopyranose
著者Silale, A, Abellon-Ruiz, J, van den Berg, B.
登録日2022-11-10
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
3BRZ
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BU of 3brz by Molmil
Crystal structure of the Pseudomonas putida toluene transporter TodX
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, TodX
著者Hearn, E.M, Patel, D.R, van den Berg, B.
登録日2007-12-21
公開日2008-06-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Outer-membrane transport of aromatic hydrocarbons as a first step in biodegradation.
Proc.Natl.Acad.Sci.Usa, 105, 2008
6SML
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BU of 6sml by Molmil
Structure of the RagAB peptide importer in the 'open-open' state
分子名称: (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, GLY-THR-GLY-GLY-SER-THR-GLY-THR-THR-SER-ALA-GLY, Lipoprotein RagB, ...
著者White, J.B.R, Ranson, N.A, van den Berg, B.
登録日2019-08-22
公開日2020-05-20
最終更新日2020-08-05
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Nat Microbiol, 5, 2020
3BRY
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BU of 3bry by Molmil
Crystal structure of the Ralstonia pickettii toluene transporter TbuX
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, TbuX
著者Hearn, E.M, Patel, D.R, van den Berg, B.
登録日2007-12-21
公開日2008-06-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Outer-membrane transport of aromatic hydrocarbons as a first step in biodegradation.
Proc.Natl.Acad.Sci.Usa, 105, 2008
8AA3
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BU of 8aa3 by Molmil
Core SusCD transporter units from the inactive levan utilisome in the presence of levan fructo-oligosaccharides DP 15-25
分子名称: MAGNESIUM ION, SusC homolog, SusD homolog, ...
著者White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B.
登録日2022-06-29
公開日2023-06-07
最終更新日2023-06-21
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
8AA1
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BU of 8aa1 by Molmil
Core SusCD transporter units from the levan utilisome with levan fructo-oligosaccharides DP 8-12
分子名称: MAGNESIUM ION, SusC homolog, SusD homolog, ...
著者White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B.
登録日2022-06-29
公開日2023-06-07
最終更新日2023-06-21
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
8A9Y
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BU of 8a9y by Molmil
Substrate-free levan utilisation machinery (utilisome)
分子名称: DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ...
著者White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B.
登録日2022-06-29
公開日2023-06-07
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
8AA0
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BU of 8aa0 by Molmil
Levan utilisation machinery (utilisome) with levan fructo-oligosaccharides DP 8-12
分子名称: DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ...
著者White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B.
登録日2022-06-29
公開日2023-06-07
最終更新日2023-06-21
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
8AA2
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BU of 8aa2 by Molmil
Inactive levan utilisation machinery (utilisome) in the presence of levan fructo-oligosaccharides DP 15-25
分子名称: DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ...
著者White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B.
登録日2022-06-29
公開日2023-06-07
最終更新日2023-06-21
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
8AA4
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BU of 8aa4 by Molmil
SusC components of the dextran utilisation system (utilisome)
分子名称: SusC homolog
著者White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B.
登録日2022-06-29
公開日2023-06-07
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
8BMZ
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BU of 8bmz by Molmil
Bacteroides thetaiotaomicron surface lipoprotein BT1954 bound to adenosylcobalamin
分子名称: Adenosylcobalamin, CHLORIDE ION, Putative surface layer protein, ...
著者Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
登録日2022-11-11
公開日2023-08-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
6SM3
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BU of 6sm3 by Molmil
Structure of the RagAB peptide importer in the 'closed-closed' state
分子名称: (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, GLY-GLY-ALA-THR-THR-ALA-THR-THR-THR-THR-SER-THR-SER, Lipoprotein RagB, ...
著者White, J.B.R, Ranson, N.A, van den Berg, B.
登録日2019-08-21
公開日2020-05-20
最終更新日2020-08-05
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Nat Microbiol, 5, 2020

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件を2024-08-07に公開中

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