1V4N
 
 | | Structure of 5'-deoxy-5'-methylthioadenosine phosphorylase homologue from Sulfolobus tokodaii | | 分子名称: | 271aa long hypothetical 5'-methylthioadenosine phosphorylase | | 著者 | Kitago, Y, Yasutake, Y, Sakai, N, Tsujimura, M, Yao, M, Watanabe, N, Kawarabayasi, Y, Tanaka, I. | | 登録日 | 2003-11-14 | | 公開日 | 2005-01-04 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.45 Å) | | 主引用文献 | Crystal structure of Sulfolobus tokodaii MTAP
To be Published
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1IRJ
 | | Crystal Structure of the MRP14 complexed with CHAPS | | 分子名称: | 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CALCIUM ION, Migration Inhibitory Factor-Related Protein 14 | | 著者 | Itou, H, Yao, M, Watanabe, N, Nishihira, J, Tanaka, I. | | 登録日 | 2001-10-09 | | 公開日 | 2002-02-27 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | The crystal structure of human MRP14 (S100A9), a Ca(2+)-dependent regulator protein in inflammatory process.
J.Mol.Biol., 316, 2002
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1VBF
 | | Crystal structure of protein L-isoaspartate O-methyltransferase homologue from Sulfolobus tokodaii | | 分子名称: | 231aa long hypothetical protein-L-isoaspartate O-methyltransferase | | 著者 | Tanaka, Y, Tsumoto, K, Yasutake, Y, Umetsu, M, Yao, M, Tanaka, I, Fukada, H, Kumagai, I. | | 登録日 | 2004-02-25 | | 公開日 | 2004-08-10 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | How Oligomerization Contributes to the Thermostability of an Archaeon Protein: PROTEIN L-ISOASPARTYL-O-METHYLTRANSFERASE FROM SULFOLOBUS TOKODAII
J.Biol.Chem., 279, 2004
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1WY7
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1WU7
 | | Crystal structure of histidyl-tRNA synthetase from Thermoplasma acidophilum | | 分子名称: | Histidyl-tRNA synthetase | | 著者 | Tanaka, Y, Sakai, N, Yao, M, Watanabe, N, Tamura, T, Tanaka, I. | | 登録日 | 2004-12-01 | | 公開日 | 2005-12-06 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Crystal structure of histidyl-tRNA synthetase from Thermoplasma acidophilum
To be Published
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1WJ9
 | | Crystal structure of a CRISPR-associated protein from thermus thermophilus | | 分子名称: | CRISPR-associated protein | | 著者 | Ebihara, A, Yao, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2004-05-29 | | 公開日 | 2004-11-29 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Crystal structure of hypothetical protein TTHB192 from Thermus thermophilus HB8 reveals a new protein family with an RNA recognition motif-like domain
Protein Sci., 15, 2006
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1WSC
 | | Crystal structure of ST0229, function unknown protein from Sulfolobus tokodaii | | 分子名称: | Hypothetical protein ST0229 | | 著者 | Murayama, T, Tanaka, Y, Sasaki, T, Yasutake, Y, Yao, M, Tsumoto, K, Tanaka, I, Kumagai, I. | | 登録日 | 2004-11-05 | | 公開日 | 2005-11-08 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2.45 Å) | | 主引用文献 | Crystal structure of ST0229, function unknown protein from Sulfolobus tokodaii
To be Published
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1WJG
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1WOZ
 | | Crystal structure of uncharacterized protein ST1454 from Sulfolobus tokodaii | | 分子名称: | (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, 177aa long conserved hypothetical protein (ST1454) | | 著者 | Sasaki, T, Tanaka, Y, Yasutake, Y, Yao, M, Tanaka, I, Tsumoto, K, Kumagai, I. | | 登録日 | 2004-08-27 | | 公開日 | 2005-10-04 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (1.94 Å) | | 主引用文献 | Crystal structure of the uncharacterized protein ST1454 from Sulfolobus tokodaii.
To be Published
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1QQY
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2E7D
 | | Crystal structure of a NEAT domain from Staphylococcus aureus | | 分子名称: | ACETATE ION, GLYCEROL, Hypothetical protein IsdH, ... | | 著者 | Suenaga, A, Tanaka, Y, Yao, M, Kumagai, I, Tanaka, I, Tsumoto, K. | | 登録日 | 2007-01-09 | | 公開日 | 2008-01-22 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Structural basis for multimeric heme complexation through a specific protein-heme interaction: the case of the third neat domain of IsdH from Staphylococcus aureus
J.Biol.Chem., 283, 2008
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1UMJ
 | | Crystal structure of Pyrococcus horikoshii CutA in the presence of 3M guanidine hydrochloride | | 分子名称: | GUANIDINE, periplasmic divalent cation tolerance protein CutA | | 著者 | Tanaka, Y, Tsumoto, K, Yasutake, Y, Sakai, N, Yao, M, Tanaka, I, Kumagai, I. | | 登録日 | 2003-10-02 | | 公開日 | 2004-10-05 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Structural evidence for guanidine-protein side chain interactions: crystal structure of CutA from Pyrococcus horikoshii in 3M guanidine hydrochloride
Biochem.Biophys.Res.Commun., 323, 2004
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2D73
 | | Crystal Structure Analysis of SusB | | 分子名称: | CALCIUM ION, alpha-glucosidase SusB | | 著者 | Kitamura, M, Yao, M. | | 登録日 | 2005-11-15 | | 公開日 | 2007-02-27 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Structural and functional analysis of a glycoside hydrolase family 97 enzyme from Bacteroides thetaiotaomicron.
J.Biol.Chem., 283, 2008
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5ZCB
 | | Crystal structure of Alpha-glucosidase | | 分子名称: | Alpha-glucosidase, CALCIUM ION | | 著者 | Kato, K, Saburi, W, Yao, M. | | 登録日 | 2018-02-16 | | 公開日 | 2018-12-26 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Function and structure of GH13_31 alpha-glucosidase with high alpha-(1→4)-glucosidic linkage specificity and transglucosylation activity.
FEBS Lett., 592, 2018
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8YIF
 | | Crystal structure of GH13_30 alpha-glucosidase CmmB in complex with acarviosin | | 分子名称: | Acarviosin, Alpha-glucosidase | | 著者 | Saburi, W, Tagami, T, Yu, J, Ose, T, Yao, M, Mori, H. | | 登録日 | 2024-02-29 | | 公開日 | 2024-07-03 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Molecular mechanism for the substrate specificity of Arthrobacter globiformis M6 alpha-glucosidase CmmB, belonging to glycoside hydrolase family 13 subfamily 30
Food Biosci, 61, 2024
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2CVI
 | | Crystal structure of hypothetical protein PHS023 from Pyrococcus horikoshii | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, 75aa long hypothetical regulatory protein AsnC, POTASSIUM ION | | 著者 | Kitago, Y, Sakai, N, Matsumoto, D, Yao, M, Aizawa, T, Demura, M, Kawano, K, Nitta, K, Watanabe, N, Tanaka, I. | | 登録日 | 2005-06-03 | | 公開日 | 2006-06-03 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | Crystal structure of hypothetical protein PHS023 from Pyrococcus horikoshii
TO BE PUBLISHED
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8YIE
 | | Crystal structure of GH13_30 alpha-glucosidase CmmB in complex with acarbose | | 分子名称: | 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-glucosidase | | 著者 | Saburi, W, Tagami, T, Yu, J, Ose, T, Yao, M, Mori, H. | | 登録日 | 2024-02-29 | | 公開日 | 2024-07-03 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Molecular mechanism for the substrate specificity of Arthrobacter globiformis M6 alpha-glucosidase CmmB, belonging to glycoside hydrolase family 13 subfamily 30
Food Biosci, 61, 2024
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2DCU
 | | Crystal structure of translation initiation factor aIF2betagamma heterodimer with GDP | | 分子名称: | GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Translation initiation factor 2 beta subunit, ... | | 著者 | Sokabe, M, Yao, M, Sakai, N, Toya, S, Tanaka, I. | | 登録日 | 2006-01-16 | | 公開日 | 2006-07-25 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (3.4 Å) | | 主引用文献 | Structure of archaeal translational initiation factor 2 betagamma-GDP reveals significant conformational change of the beta-subunit and switch 1 region.
Proc.Natl.Acad.Sci.USA, 103, 2006
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2D74
 | | Crystal structure of translation initiation factor aIF2betagamma heterodimer | | 分子名称: | Translation initiation factor 2 beta subunit, Translation initiation factor 2 gamma subunit, ZINC ION | | 著者 | Sokabe, M, Yao, M, Sakai, N, Toya, S, Tanaka, I. | | 登録日 | 2005-11-16 | | 公開日 | 2006-07-25 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Structure of archaeal translational initiation factor 2 betagamma-GDP reveals significant conformational change of the beta-subunit and switch 1 region.
Proc.Natl.Acad.Sci.USA, 103, 2006
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2DGJ
 | | Crystal structure of EbhA (756-1003 domain) from Staphylococcus aureus | | 分子名称: | ACETIC ACID, GLYCEROL, SULFATE ION, ... | | 著者 | Tanaka, Y, Yao, M, Kuroda, M, Watanabe, N, Ohta, T, Tanaka, I. | | 登録日 | 2006-03-14 | | 公開日 | 2007-03-20 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | | 主引用文献 | A helical string of alternately connected three-helix bundles for the cell wall-associated adhesion protein Ebh from Staphylococcus aureus
Structure, 16, 2008
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2G5H
 | | Structure of tRNA-Dependent Amidotransferase GatCAB | | 分子名称: | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, Glutamyl-tRNA(Gln) amidotransferase subunit A, ... | | 著者 | Nakamura, A, Yao, M, Tanaka, I. | | 登録日 | 2006-02-23 | | 公開日 | 2006-07-18 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Ammonia channel couples glutaminase with transamidase reactions in GatCAB
Science, 312, 2006
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5XFM
 | | Crystal structure of beta-arabinopyranosidase | | 分子名称: | Alpha-glucosidase, CALCIUM ION | | 著者 | Kato, K, Okuyama, M, Yao, M. | | 登録日 | 2017-04-10 | | 公開日 | 2018-02-28 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | A novel glycoside hydrolase family 97 enzyme: Bifunctional beta-l-arabinopyranosidase/ alpha-galactosidase from Bacteroides thetaiotaomicron.
Biochimie, 142, 2017
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2G5I
 | | Structure of tRNA-Dependent Amidotransferase GatCAB complexed with ADP-AlF4 | | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C, ... | | 著者 | Nakamura, A, Yao, M, Tanaka, I. | | 登録日 | 2006-02-23 | | 公開日 | 2006-07-18 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (3.35 Å) | | 主引用文献 | Ammonia channel couples glutaminase with transamidase reactions in GatCAB
Science, 312, 2006
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5Z3C
 | | Glycosidase E178A | | 分子名称: | GLYCEROL, Glycoside hydrolase 15-related protein | | 著者 | Tanaka, Y, Chen, M, Tagami, T, Yao, M, Kimura, A. | | 登録日 | 2018-01-05 | | 公開日 | 2019-05-15 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Structural insights reveal the second base catalyst of isomaltose glucohydrolase.
Febs J., 289, 2022
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5Z3D
 | | Glycosidase F290Y | | 分子名称: | CITRIC ACID, GLYCEROL, Glycoside hydrolase 15-related protein | | 著者 | Tanaka, Y, Chen, M, Tagami, T, Yao, M, Kimura, A. | | 登録日 | 2018-01-05 | | 公開日 | 2019-05-15 | | 最終更新日 | 2022-02-23 | | 実験手法 | X-RAY DIFFRACTION (1.25 Å) | | 主引用文献 | Structural insights reveal the second base catalyst of isomaltose glucohydrolase.
Febs J., 289, 2022
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