Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6FDF
DownloadVisualize
BU of 6fdf by Molmil
Crystal structure of S. pombe Dnmt2 methyltransferase
分子名称: GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, tRNA (cytosine(38)-C(5))-methyltransferase
著者Johannsson, S, Neumann, P, Ficner, R.
登録日2017-12-22
公開日2018-06-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.697 Å)
主引用文献Structural insights into the stimulation of S. pombe Dnmt2 catalytic efficiency by the tRNA nucleoside queuosine.
Sci Rep, 8, 2018
6FAC
DownloadVisualize
BU of 6fac by Molmil
CRYSTAL STRUCTURE OF THE DEAH-BOX HELICASE PRP2 IN COMPLEX WITH ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
著者Schmitt, A, Hamann, F, Neumann, P, Ficner, R.
登録日2017-12-15
公開日2018-07-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of the spliceosomal DEAH-box ATPase Prp2.
Acta Crystallogr D Struct Biol, 74, 2018
6FAA
DownloadVisualize
BU of 6faa by Molmil
CRYSTAL STRUCTURE OF THE DEAH-BOX HELICASE PRP2 IN COMPLEX WITH ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ETHANOL, GLYCEROL, ...
著者Schmitt, A, Hamann, F, Neumann, P, Ficner, R.
登録日2017-12-15
公開日2018-07-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystal structure of the spliceosomal DEAH-box ATPase Prp2.
Acta Crystallogr D Struct Biol, 74, 2018
6FA5
DownloadVisualize
BU of 6fa5 by Molmil
CRYSTAL STRUCTURE OF THE DEAH-BOX HELICASE PRP2 IN COMPLEX WITH ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
著者Hamann, F, Schmitt, A, Neumann, P, Ficner, R.
登録日2017-12-15
公開日2018-07-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Crystal structure of the spliceosomal DEAH-box ATPase Prp2.
Acta Crystallogr D Struct Biol, 74, 2018
6H42
DownloadVisualize
BU of 6h42 by Molmil
crystal structure of the human TGT catalytic subunit QTRT1
分子名称: BROMIDE ION, CHLORIDE ION, GLUTAMIC ACID, ...
著者Johannsson, S, Neumann, P, Ficner, R.
登録日2018-07-20
公開日2018-09-05
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal Structure of the Human tRNA Guanine Transglycosylase Catalytic Subunit QTRT1.
Biomolecules, 8, 2018
6H45
DownloadVisualize
BU of 6h45 by Molmil
crystal structure of the human TGT catalytic subunit QTRT1 in complex with queuine
分子名称: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, BROMIDE ION, CHLORIDE ION, ...
著者Johannsson, S, Neumann, P, Ficner, R.
登録日2018-07-20
公開日2018-09-05
最終更新日2023-03-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of the Human tRNA Guanine Transglycosylase Catalytic Subunit QTRT1.
Biomolecules, 8, 2018
3QV2
DownloadVisualize
BU of 3qv2 by Molmil
Structure Analysis of Entamoeba histolytica methyltransferase EhMeth
分子名称: 5-cytosine DNA methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION
著者Schulz, E.C, Roth, H.M, Ankri, S, Ficner, R.
登録日2011-02-25
公開日2012-04-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal Structure Analysis of Entamoeba histolytica Methyltransferase
To be Published
3QTP
DownloadVisualize
BU of 3qtp by Molmil
Crystal Structure Analysis of Entamoeba histolytica Enolase
分子名称: 2-PHOSPHOGLYCERIC ACID, Enolase 1, MAGNESIUM ION, ...
著者Schulz, E.C, Ficner, R.
登録日2011-02-23
公開日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure analysis of Entamoeba histolytica enolase.
Acta Crystallogr.,Sect.D, 67, 2011
8OMR
DownloadVisualize
BU of 8omr by Molmil
Human tRNA guanine transglycosylase (TGT) bound to tRNAAsp
分子名称: 9-DEAZAGUANINE, Queuine tRNA-ribosyltransferase accessory subunit 2, Queuine tRNA-ribosyltransferase catalytic subunit 1, ...
著者Sievers, K, Neumann, P, Susac, L, Trowitzsch, S, Tampe, R, Ficner, R.
登録日2023-03-31
公開日2023-12-20
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural and functional insights into tRNA recognition by human tRNA guanine transglycosylase.
Structure, 32, 2024
4NHO
DownloadVisualize
BU of 4nho by Molmil
Structure of the spliceosomal DEAD-box protein Prp28
分子名称: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, GLYCEROL, MERCURY (II) ION, ...
著者Moehlmann, S, Neumann, P, Ficner, R.
登録日2013-11-05
公開日2014-06-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional analysis of the human spliceosomal DEAD-box helicase Prp28.
Acta Crystallogr.,Sect.D, 70, 2014
5LZB
DownloadVisualize
BU of 5lzb by Molmil
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
登録日2016-09-29
公開日2016-11-23
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (5.3 Å)
主引用文献The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
5MED
DownloadVisualize
BU of 5med by Molmil
Cyanothece lipoxygenase 2 (CspLOX2)
分子名称: 1,3-PROPANDIOL, 1,4-BUTANEDIOL, 1-BUTANOL, ...
著者Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
登録日2016-11-14
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
5MEE
DownloadVisualize
BU of 5mee by Molmil
Cyanothece lipoxygenase 2 (CspLOX2) variant - L304V
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Arachidonate 15-lipoxygenase, FE (III) ION, ...
著者Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
登録日2016-11-14
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
5MEG
DownloadVisualize
BU of 5meg by Molmil
Manganese-substituted Cyanothece lipoxygenase 2 (Mn-CspLOX2)
分子名称: Arachidonate 15-lipoxygenase, CHLORIDE ION, ETHANOL, ...
著者Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
登録日2016-11-14
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
5MEF
DownloadVisualize
BU of 5mef by Molmil
Cyanothece lipoxygenase 2 (CspLOX2) variant - L304F
分子名称: Arachidonate 15-lipoxygenase, CHLORIDE ION, FE (III) ION, ...
著者Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
登録日2016-11-14
公開日2017-05-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.357 Å)
主引用文献Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
5LZD
DownloadVisualize
BU of 5lzd by Molmil
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
登録日2016-09-29
公開日2016-11-23
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
5LZE
DownloadVisualize
BU of 5lze by Molmil
Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
登録日2016-09-29
公開日2016-11-23
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
5LZC
DownloadVisualize
BU of 5lzc by Molmil
Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
登録日2016-09-29
公開日2016-11-23
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
5LZA
DownloadVisualize
BU of 5lza by Molmil
Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
登録日2016-09-29
公開日2016-11-23
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
5LZF
DownloadVisualize
BU of 5lzf by Molmil
Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
登録日2016-09-29
公開日2016-11-23
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
4KXY
DownloadVisualize
BU of 4kxy by Molmil
Human transketolase in complex with ThDP analogue (R)-2-(1,2-dihydroxyethyl)-3-deaza-ThDP
分子名称: 1,2-ETHANEDIOL, 2-{4-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-[(1R)-1,2-dihydroxyethyl]-3-methylthiophen-2-yl}ethyl trihydrogen diphosphate, CALCIUM ION, ...
著者Neumann, P, Luedtke, S, Erixon, K.M, Leeper, F, Kluger, R, Ficner, R, Tittmann, K.
登録日2013-05-28
公開日2013-08-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Sub-angstrom-resolution crystallography reveals physical distortions that enhance reactivity of a covalent enzymatic intermediate.
Nat Chem, 5, 2013
4O1J
DownloadVisualize
BU of 4o1j by Molmil
Crystal structures of two tetrameric beta-carbonic anhydrases from the filamentous ascomycete Sordaria macrospora.
分子名称: CHLORIDE ION, Carbonic anhydrase, ZINC ION
著者Lehneck, R, Neumann, P, Vullo, D, Elleuche, S, Supuran, C.T, Ficner, R, Poggeler, S.
登録日2013-12-16
公開日2014-03-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.695 Å)
主引用文献Crystal structures of two tetrameric beta-carbonic anhydrases from the filamentous ascomycete Sordaria macrospora.
Febs J., 281, 2014
3NS5
DownloadVisualize
BU of 3ns5 by Molmil
Crystal structure of the RNA recognition motif of yeast eIF3b residues 76-161
分子名称: Eukaryotic translation initiation factor 3 subunit B
著者Khoshnevis, S, Neumann, P, Ficner, R.
登録日2010-07-01
公開日2010-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Crystal structure of the RNA recognition motif of yeast translation initiation factor eIF3b reveals differences to human eIF3b.
Plos One, 5, 2010
4O1K
DownloadVisualize
BU of 4o1k by Molmil
Crystal structures of two tetrameric beta-carbonic anhydrases from the filamentous ascomycete Sordaria macrospora.
分子名称: Carbonic anhydrase, ZINC ION
著者Lehneck, R, Neumann, P, Vullo, D, Elleuche, S, Supuran, C.T, Ficner, R, Poggeler, S.
登録日2013-12-16
公開日2014-03-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Crystal structures of two tetrameric beta-carbonic anhydrases from the filamentous ascomycete Sordaria macrospora.
Febs J., 281, 2014
4KXX
DownloadVisualize
BU of 4kxx by Molmil
Human transketolase in covalent complex with donor ketose D-sedoheptulose-7-phosphate
分子名称: (2R,3R,4S,5R,6S)-2,3,4,5,6,7-hexahydroxyheptyl dihydrogen phosphate, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
著者Neumann, P, Luedtke, S, Ficner, R, Tittmann, K.
登録日2013-05-28
公開日2013-08-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Sub-angstrom-resolution crystallography reveals physical distortions that enhance reactivity of a covalent enzymatic intermediate.
Nat Chem, 5, 2013

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon