5GLP
| Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose, calcium-bound form | 分子名称: | ACETATE ION, CALCIUM ION, Glycoside hydrolase family 43, ... | 著者 | Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K. | 登録日 | 2016-07-12 | 公開日 | 2017-03-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium. J. Biochem., 162, 2017
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5GLK
| Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compost microbial metagenome, calcium-free form. | 分子名称: | ACETATE ION, GLYCEROL, Glycoside hydrolase family 43, ... | 著者 | Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K. | 登録日 | 2016-07-12 | 公開日 | 2017-03-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium. J. Biochem., 162, 2017
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5GLO
| Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose, calcium-free form | 分子名称: | ACETATE ION, Glycoside hydrolase family 43, SODIUM ION, ... | 著者 | Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K. | 登録日 | 2016-07-12 | 公開日 | 2017-03-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium. J. Biochem., 162, 2017
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2EPF
| Crystal Structure of Zinc-Bound Pseudecin From Pseudechis Porphyriacus | 分子名称: | Pseudecin, SODIUM ION, ZINC ION | 著者 | Suzuki, N, Yamazaki, Y, Fujimoto, Z, Morita, T, Mizuno, H. | 登録日 | 2007-03-29 | 公開日 | 2008-03-11 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structures of pseudechetoxin and pseudecin, two snake-venom cysteine-rich secretory proteins that target cyclic nucleotide-gated ion channels: implications for movement of the C-terminal cysteine-rich domain Acta Crystallogr.,Sect.D, 64, 2008
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2DDA
| Crystal structure of pseudechetoxin from Pseudechis australis | 分子名称: | FORMIC ACID, GLYCEROL, Pseudechetoxin, ... | 著者 | Suzuki, N, Yamazaki, Y, Fujimoto, Z, Morita, T, Mizuno, H. | 登録日 | 2006-01-25 | 公開日 | 2007-01-30 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | 主引用文献 | Structures of pseudechetoxin and pseudecin, two snake-venom cysteine-rich secretory proteins that target cyclic nucleotide-gated ion channels: implications for movement of the C-terminal cysteine-rich domain Acta Crystallogr.,Sect.D, 64, 2008
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3A04
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3A05
| Crystal structure of tryptophanyl-tRNA synthetase from hyperthermophilic archaeon, Aeropyrum pernix K1 complex with tryptophan | 分子名称: | CADMIUM ION, IRON/SULFUR CLUSTER, TRYPTOPHAN, ... | 著者 | Tsuchiya, W, Fujimoto, Z, Hasegawa, T. | 登録日 | 2009-03-02 | 公開日 | 2010-03-09 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of tryptophanyl-tRNA synthetase from hyperthermophilic archaeon, Aeropyrum pernix K1 To be Published
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3VMN
| Crystal structure of dextranase from Streptococcus mutans | 分子名称: | Dextranase, PHOSPHATE ION | 著者 | Suzuki, N, Fujimoto, Z, Kim, Y.M, Momma, M, Okuyama, M, Mori, H, Funane, K, Kimura, A. | 登録日 | 2011-12-14 | 公開日 | 2012-02-15 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Structural elucidation of dextran degradation mechanism by streptococcus mutans dextranase belonging to glycoside hydrolase family 66 J.Biol.Chem., 287, 2012
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3VMO
| Crystal structure of dextranase from Streptococcus mutans in complex with isomaltotriose | 分子名称: | Dextranase, PHOSPHATE ION, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose, ... | 著者 | Suzuki, N, Fujimoto, Z, Kim, Y.M, Momma, M, Okuyama, M, Mori, H, Funane, K, Kimura, A. | 登録日 | 2011-12-14 | 公開日 | 2012-02-15 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural elucidation of dextran degradation mechanism by streptococcus mutans dextranase belonging to glycoside hydrolase family 66 J.Biol.Chem., 287, 2012
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7YL5
| Cell surface protein YwfG protein complexed with mannose | 分子名称: | CALCIUM ION, GRAM_POS_ANCHORING domain-containing protein, SULFATE ION, ... | 著者 | Tsuchiya, W, Fujimoto, Z, Suzuki, C. | 登録日 | 2022-07-25 | 公開日 | 2023-06-07 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Cell-surface protein YwfG of Lactococcus lactis binds to alpha-1,2-linked mannose. Plos One, 18, 2023
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7YL4
| Cell surface protein YwfG protein (apo form) | 分子名称: | CALCIUM ION, GRAM_POS_ANCHORING domain-containing protein, SULFATE ION | 著者 | Tsuchiya, W, Fujimoto, Z, Suzuki, C. | 登録日 | 2022-07-25 | 公開日 | 2023-06-07 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Cell-surface protein YwfG of Lactococcus lactis binds to alpha-1,2-linked mannose. Plos One, 18, 2023
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7YL6
| Cell surface protein YwfG protein complexed with alpha-1,2-mannobiose | 分子名称: | CALCIUM ION, GRAM_POS_ANCHORING domain-containing protein, SULFATE ION, ... | 著者 | Tsuchiya, W, Fujimoto, Z, Suzuki, C. | 登録日 | 2022-07-25 | 公開日 | 2023-06-07 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | 主引用文献 | Cell-surface protein YwfG of Lactococcus lactis binds to alpha-1,2-linked mannose. Plos One, 18, 2023
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3VMP
| Crystal structure of dextranase from Streptococcus mutans in complex with 4,5-epoxypentyl alpha-D-glucopyranoside | 分子名称: | 5-hydroxypentyl alpha-D-glucopyranoside, Dextranase, PHOSPHATE ION | 著者 | Suzuki, N, Fujimoto, Z, Kim, Y.M, Momma, M, Okuyama, M, Mori, H, Funane, K, Kimura, A. | 登録日 | 2011-12-14 | 公開日 | 2012-02-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.88 Å) | 主引用文献 | Structural elucidation of dextran degradation mechanism by streptococcus mutans dextranase belonging to glycoside hydrolase family 66 J.Biol.Chem., 287, 2012
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7EZL
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7EZI
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3VNZ
| Crystal structure of beta-glucuronidase from Acidobacterium capsulatum in complex with D-glucuronic acid | 分子名称: | GLYCEROL, PHOSPHATE ION, beta-D-glucopyranuronic acid, ... | 著者 | Momma, M, Fujimoto, Z, Michikawa, M, Ichinose, H, Yoshida, M, Kotake, Y, Biely, P, Tsumuraya, Y, Kaneko, S. | 登録日 | 2012-01-18 | 公開日 | 2012-02-22 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structural and biochemical characterization of glycoside hydrolase family 79 beta-glucuronidase from Acidobacterium capsulatum J.Biol.Chem., 287, 2012
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3VNY
| Crystal structure of beta-glucuronidase from Acidobacterium capsulatum | 分子名称: | GLYCEROL, PHOSPHATE ION, beta-GLUCURONIDASE | 著者 | Momma, M, Fujimoto, Z, Michikawa, M, Ichinose, H, Yoshida, M, Kotake, Y, Biely, P, Tsumuraya, Y, Kaneko, S. | 登録日 | 2012-01-18 | 公開日 | 2012-02-22 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Structural and biochemical characterization of glycoside hydrolase family 79 beta-glucuronidase from Acidobacterium capsulatum J.Biol.Chem., 287, 2012
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3VO0
| Crystal structure of beta-glucuronidase from Acidobacterium capsulatum covalent-bonded with 2-deoxy-2-fluoro-D-glucuronic acid | 分子名称: | 2,4-DINITROPHENOL, 2-deoxy-2-fluoro-alpha-D-glucopyranuronic acid, 2-deoxy-2-fluoro-beta-D-glucopyranuronic acid, ... | 著者 | Momma, M, Fujimoto, Z, Michikawa, M, Ichinose, H, Jongkees, S, Yoshida, M, Kotake, Y, Biely, P, Tsumuraya, Y, Withers, S, Kaneko, S. | 登録日 | 2012-01-18 | 公開日 | 2012-02-22 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural and biochemical characterization of glycoside hydrolase family 79 beta-glucuronidase from Acidobacterium capsulatum J.Biol.Chem., 287, 2012
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3VUF
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3VUE
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7C3B
| Ferredoxin reductase in carbazole 1,9a-dioxygenase (FAD apo form) | 分子名称: | ACETATE ION, CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, ... | 著者 | Ashikawa, Y, Fujimoto, Z, Nojiri, H. | 登録日 | 2020-05-11 | 公開日 | 2021-05-26 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal structure of the ferredoxin reductase component of carbazole 1,9a-dioxygenase from Janthinobacterium sp. J3. Acta Crystallogr D Struct Biol, 77, 2021
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7C3A
| Ferredoxin reductase in carbazole 1,9a-dioxygenase | 分子名称: | CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ... | 著者 | Ashikawa, Y, Fujimoto, Z, Nojiri, H. | 登録日 | 2020-05-11 | 公開日 | 2021-05-26 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Crystal structure of the ferredoxin reductase component of carbazole 1,9a-dioxygenase from Janthinobacterium sp. J3. Acta Crystallogr D Struct Biol, 77, 2021
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3BOY
| Crystal structure of the HutP antitermination complex bound to the HUT mRNA | 分子名称: | 5'-R(*UP*UP*UP*AP*GP*UP*UP*UP*UP*UP*AP*GP*UP*UP*UP*UP*UP*AP*GP*UP*UP*U)-3', HISTIDINE, Hut operon positive regulatory protein, ... | 著者 | Kumarevel, T.S, Balasundaresan, D, Jeyakanthan, J, Shinkai, A, Yokoyama, S, Kumar, P.K.R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-12-18 | 公開日 | 2008-01-15 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Crystal Structure of HutP complexed with the 55-mer RNA To be Published
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4NB9
| Oxygenase with Ile262 replaced by Val and ferredoxin complex of carbazole 1,9a-dioxygenase | 分子名称: | FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin CarAc, ... | 著者 | Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H. | 登録日 | 2013-10-23 | 公開日 | 2014-03-26 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.05 Å) | 主引用文献 | Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase. Appl.Environ.Microbiol., 80, 2014
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4NBD
| Carbazole-bound oxygenase with Phe275 replaced by Trp and ferredoxin complex of carbazole 1,9a-dioxygenase (form2) | 分子名称: | 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ... | 著者 | Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H. | 登録日 | 2013-10-23 | 公開日 | 2014-03-26 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase. Appl.Environ.Microbiol., 80, 2014
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