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8HDD
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BU of 8hdd by Molmil
Complex structure of catalytic, small, and a partial electron transfer subunits from Burkholderia cepacia FAD glucose dehydrogenase
分子名称: FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Glucose dehydrogenase, ...
著者Yoshida, H, Sode, K.
登録日2022-11-04
公開日2022-12-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Microgravity environment grown crystal structure information based engineering of direct electron transfer type glucose dehydrogenase.
Commun Biol, 5, 2022
5J8L
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BU of 5j8l by Molmil
Crystal structure of D-tagatose 3-epimerase C66S from Pseudomonas cichorii in complex with 1-deoxy L-tagatose, using a crystal grown in microgravity
分子名称: 1-deoxy-L-tagatose, 1-deoxy-beta-L-tagatopyranose, D-tagatose 3-epimerase, ...
著者Yoshida, H, Yoshihara, A, Izumori, K, Kamitori, S.
登録日2016-04-08
公開日2016-04-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献X-ray structures of the Pseudomonas cichorii D-tagatose 3-epimerase mutant form C66S recognizing deoxy sugars as substrates
Appl. Microbiol. Biotechnol., 100, 2016
2IL8
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BU of 2il8 by Molmil
THREE-DIMENSIONAL STRUCTURE OF INTERLEUKIN 8 IN SOLUTION
分子名称: INTERLEUKIN-8
著者Clore, G.M.
登録日1990-03-08
公開日1991-01-15
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Three-dimensional structure of interleukin 8 in solution.
Biochemistry, 29, 1990
5T8E
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BU of 5t8e by Molmil
Synthesis and biological evaluation of novel selective androgen receptor modulators (SARMs). Part II: Optimization of 4-(pyrrolidin-1-yl)benzonitrile derivatives
分子名称: 2-chloro-4-[(2S,3S)-3-hydroxy-2-methylpyrrolidin-1-yl]-3-methylbenzonitrile, Androgen receptor, GLYCEROL
著者Wilson, K.P.
登録日2016-09-07
公開日2017-04-26
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Synthesis and biological evaluation of novel selective androgen receptor modulators (SARMs). Part II: Optimization of 4-(pyrrolidin-1-yl)benzonitrile derivatives.
Bioorg. Med. Chem. Lett., 27, 2017
4GJI
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BU of 4gji by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant H101N in complex with L-rhamnopyranose
分子名称: L-RHAMNOSE, L-rhamnose isomerase, MANGANESE (II) ION, ...
著者Yoshida, H, Kamitori, S.
登録日2012-08-09
公開日2012-12-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of l-rhamnose isomerase in complex with l-rhamnopyranose demonstrates the sugar-ring opening mechanism and the role of a substrate sub-binding site.
FEBS Open Bio, 3, 2013
4GJJ
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BU of 4gjj by Molmil
Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant H101N in complex with D-allopyranose
分子名称: D-ALLOSE, L-rhamnose isomerase, MANGANESE (II) ION, ...
著者Yoshida, H, Kamitori, S.
登録日2012-08-09
公開日2012-12-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Structure of l-rhamnose isomerase in complex with l-rhamnopyranose demonstrates the sugar-ring opening mechanism and the role of a substrate sub-binding site.
FEBS Open Bio, 3, 2013
2RQ0
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BU of 2rq0 by Molmil
Solution Structure of Mouse Lipocalin-type Prostaglandin D Synthase Possessing the Intrinsic Disulfide Bond
分子名称: Prostaglandin-H2 D-isomerase
著者Miyamoto, Y, Nishimura, S, Inui, T.
登録日2008-12-24
公開日2009-12-15
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural analysis of lipocalin-type prostaglandin D synthase complexed with biliverdin by small-angle X-ray scattering and multi-dimensional NMR.
J.Struct.Biol., 2009
3ETW
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BU of 3etw by Molmil
Crystal Structure of bacterial adhesin FadA
分子名称: Adhesin A, THIOCYANATE ION
著者Nithianantham, S, Xu, M, Wu, N, Shoham, M, Han, Y.W.
登録日2008-10-08
公開日2008-12-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of FadA Adhesin from Fusobacterium nucleatum Reveals a Novel Oligomerization Motif, the Leucine Chain.
J.Biol.Chem., 284, 2009
3ETY
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BU of 3ety by Molmil
Crystal structure of bacterial adhesin FadA L14A mutant
分子名称: Adhesin A
著者Nithianantham, S, Xu, M, Wu, N, Shoham, M, Han, Y.W.
登録日2008-10-08
公開日2008-12-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structure of FadA Adhesin from Fusobacterium nucleatum Reveals a Novel Oligomerization Motif, the Leucine Chain.
J.Biol.Chem., 284, 2009
3ETX
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BU of 3etx by Molmil
Crystal structure of bacterial adhesin FadA L14A mutant
分子名称: Adhesin A
著者Nithianantham, S, Xu, M, Wu, N, Shoham, M, Han, Y.W.
登録日2008-10-08
公開日2008-12-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of FadA Adhesin from Fusobacterium nucleatum Reveals a Novel Oligomerization Motif, the Leucine Chain.
J.Biol.Chem., 284, 2009
3ETZ
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BU of 3etz by Molmil
Crystal structure of bacterial adhesin FadA L76A mutant
分子名称: Adhesin A
著者Nithianantham, S, Xu, M, Wu, N, Shoham, M, Han, Y.W.
登録日2008-10-08
公開日2008-12-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of FadA Adhesin from Fusobacterium nucleatum Reveals a Novel Oligomerization Motif, the Leucine Chain.
J.Biol.Chem., 284, 2009
5XWM
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BU of 5xwm by Molmil
human ERp44 zinc-bound form
分子名称: CHLORIDE ION, Endoplasmic reticulum resident protein 44, ZINC ION
著者Watanabe, S, Harayama, M, Inaba, K.
登録日2017-06-30
公開日2019-01-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Zinc regulates ERp44-dependent protein quality control in the early secretory pathway.
Nat Commun, 10, 2019
5B1M
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BU of 5b1m by Molmil
The mouse nucleosome structure containing H3.1
分子名称: DNA (146-MER), Histone H2A type 1, Histone H2B type 3-A, ...
著者Urahama, T, Machida, S, Horikoshi, N, Osakabe, A, Tachiwana, H, Taguchi, H, Kurumizaka, H.
登録日2015-12-08
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Testis-Specific Histone Variant H3t Gene Is Essential for Entry into Spermatogenesis
Cell Rep, 18, 2017
5B1L
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BU of 5b1l by Molmil
The mouse nucleosome structure containing H3t
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1, ...
著者Urahama, T, Machida, S, Horikoshi, N, Osakabe, A, Tachiwana, H, Taguchi, H, Kurumizaka, H.
登録日2015-12-08
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Testis-Specific Histone Variant H3t Gene Is Essential for Entry into Spermatogenesis
Cell Rep, 18, 2017
5X5G
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BU of 5x5g by Molmil
Crystal structure of TLA-3 extended-spectrum beta-lactamase in a complex with OP0595
分子名称: (2S,5R)-N-(2-aminoethoxy)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase, SODIUM ION, ...
著者Wachino, J, Jin, W, Arakawa, Y.
登録日2017-02-15
公開日2017-07-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Insights into the TLA-3 Extended-Spectrum beta-Lactamase and Its Inhibition by Avibactam and OP0595.
Antimicrob. Agents Chemother., 61, 2017
4Y02
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BU of 4y02 by Molmil
Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis (Ground)
分子名称: GLYCEROL, POTASSIUM ION, Peptidase S46
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2015-02-05
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Sci Rep, 5, 2015
4Y06
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BU of 4y06 by Molmil
Crystal structure of the DAP BII (G675R) dipeptide complex
分子名称: Dipeptidyl aminopeptidase BII, GLUTAMIC ACID, GLYCEROL, ...
著者Sakamoto, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2015-02-05
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Sci Rep, 5, 2015
5V3B
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BU of 5v3b by Molmil
Human A20 OTU domain (WT) with acetamidylated C103
分子名称: Tumor necrosis factor alpha-induced protein 3
著者Langley, D.B, Christ, D, Grey, S.
登録日2017-03-07
公開日2018-03-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Denisovan, modern human and mouse TNFAIP3 alleles tune A20 phosphorylation and immunity.
Nat.Immunol., 20, 2019
5V3P
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BU of 5v3p by Molmil
Human A20 OTU domain (I325N) with acetamidylated C103
分子名称: Tumor necrosis factor alpha-induced protein 3
著者Langley, D.B, Christ, D, Grey, S.
登録日2017-03-07
公開日2018-03-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Denisovan, modern human and mouse TNFAIP3 alleles tune A20 phosphorylation and immunity.
Nat.Immunol., 20, 2019
1WZG
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BU of 1wzg by Molmil
Crystal Structure Of An Artificial Metalloprotein: Fe(Salophen)/Wild Type Heme oxygenase
分子名称: 2,2'-[1,2-PHENYLENEBIS(NITRILOMETHYLIDYNE)]BIS[PHENOLATO]](2-)-N,N',O,O']-IRON, GLYCEROL, Heme oxygenase, ...
著者Unno, M, Yokoi, N, Ueno, T, Watanabe, Y, Ikeda-Saito, M.
登録日2005-03-04
公開日2006-02-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Design of metal cofactors activated by a protein-protein electron transfer system.
Proc.Natl.Acad.Sci.Usa, 103, 2006
5GTF
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BU of 5gtf by Molmil
Crystal structure of onion lachrymatory factor synthase (LFS) containing glycerol
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Lachrymatory-factor synthase, ...
著者Takabe, J, Arakawa, T, Masamura, N, Tsuge, N, Imai, S, Fushinobu, S.
登録日2016-08-20
公開日2017-08-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Dissecting the Stereocontrolled Conversion of Short-Lived Sulfenic Acid by Lachrymatory Factor Synthase
Acs Catalysis, 10, 2020
5GTE
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BU of 5gte by Molmil
Crystal structure of onion lachrymatory factor synthase (LFS), solute-free form
分子名称: Lachrymatory-factor synthase, SULFATE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Takabe, J, Arakawa, T, Masamura, N, Tsuge, N, Imai, S, Fushinobu, S.
登録日2016-08-20
公開日2017-08-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Dissecting the Stereocontrolled Conversion of Short-Lived Sulfenic Acid by Lachrymatory Factor Synthase
Acs Catalysis, 10, 2020
5GTG
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BU of 5gtg by Molmil
Crystal structure of onion lachrymatory factor synthase (LFS) containing 1,2-propanediol
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lachrymatory-factor synthase, S-1,2-PROPANEDIOL, ...
著者Arakawa, T, Sato, Y, Takabe, J, Masamura, N, Tsuge, N, Imai, S, Fushinobu, S.
登録日2016-08-20
公開日2017-08-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Dissecting the Stereocontrolled Conversion of Short-Lived Sulfenic Acid by Lachrymatory Factor Synthase
Acs Catalysis, 10, 2020
1IL8
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BU of 1il8 by Molmil
THREE-DIMENSIONAL STRUCTURE OF INTERLEUKIN 8 IN SOLUTION
分子名称: INTERLEUKIN-8
著者Clore, G.M, Gronenborn, A.M.
登録日1990-03-08
公開日1991-01-15
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Three-dimensional structure of interleukin 8 in solution.
Biochemistry, 29, 1990
5GS8
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BU of 5gs8 by Molmil
Crystal structure of TLA-3 extended-spectrum beta-lactamase
分子名称: Beta-lactamase, CHLORIDE ION, SODIUM ION, ...
著者Wachino, J, Jin, W, Arakawa, Y.
登録日2016-08-14
公開日2017-07-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structural Insights into the TLA-3 Extended-Spectrum beta-Lactamase and Its Inhibition by Avibactam and OP0595.
Antimicrob. Agents Chemother., 61, 2017

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