Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3JSC
DownloadVisualize
BU of 3jsc by Molmil
CcdBVfi-FormI-pH7.0
分子名称: CcdB, SULFATE ION
著者De Jonge, N, Buts, L, Loris, R.
登録日2009-09-10
公開日2009-12-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and thermodynamic characterization of vibrio fischeri CCDB
J.Biol.Chem., 285, 2010
6XX6
DownloadVisualize
BU of 6xx6 by Molmil
Arabidopsis thaliana Casein Kinase 2 (CK2) alpha-1 crystal form I
分子名称: CHLORIDE ION, Casein kinase II subunit alpha-1, PIVALIC ACID, ...
著者Demulder, M, De Veylder, L, Loris, R.
登録日2020-01-27
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.84919691 Å)
主引用文献Crystal structure of Arabidopsis thaliana casein kinase 2 alpha 1.
Acta Crystallogr.,Sect.F, 76, 2020
6XX8
DownloadVisualize
BU of 6xx8 by Molmil
Arabidopsis thaliana Casein Kinase 2 (CK2) alpha-1 crystal form II
分子名称: Casein kinase II subunit alpha-1
著者Demulder, M, De Veylder, L, Loris, R.
登録日2020-01-27
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Arabidopsis thaliana casein kinase 2 alpha 1.
Acta Crystallogr.,Sect.F, 76, 2020
6Y2P
DownloadVisualize
BU of 6y2p by Molmil
Escherichia coli RnlA-RnlB Toxin-Antitoxin System.
分子名称: Antitoxin RnlB, mRNA endoribonuclease toxin LS
著者Garcia-Rodriguez, G, Talavera Perez, A, Loris, R.
登録日2020-02-17
公開日2021-04-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Alternative dimerization is required for activity and inhibition of the HEPN ribonuclease RnlA.
Nucleic Acids Res., 49, 2021
6Y2Q
DownloadVisualize
BU of 6y2q by Molmil
Escherichia coli RnlA endoribonuclease
分子名称: CHLORIDE ION, mRNA endoribonuclease toxin LS
著者Garcia-Rodriguez, G, Loris, R.
登録日2020-02-17
公開日2021-05-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Alternative dimerization is required for activity and inhibition of the HEPN ribonuclease RnlA.
Nucleic Acids Res., 49, 2021
4GC2
DownloadVisualize
BU of 4gc2 by Molmil
Crystal structure of the bacteriocin LLPA from pseudomonas sp. in complex with GlcNAc beta(1-2)Man alpha(1-3)[GlcNAc beta(1-2)Man alpha(1-6)]Man
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose, Putidacin L1
著者Garcia-Pino, A, Loris, R.
登録日2012-07-29
公開日2013-04-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1201 Å)
主引用文献Structural Determinants for Activity and Specificity of the Bacterial Toxin LlpA.
Plos Pathog., 9, 2013
4GC1
DownloadVisualize
BU of 4gc1 by Molmil
Crystal structure of the bacteriocin LLPA from pseudomonas sp. in complex with Man alpha(1-2)Man
分子名称: Putidacin L1, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
著者Garcia-Pino, A, Loris, R.
登録日2012-07-29
公開日2013-04-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.0801 Å)
主引用文献Structural Determinants for Activity and Specificity of the Bacterial Toxin LlpA.
Plos Pathog., 9, 2013
4ELY
DownloadVisualize
BU of 4ely by Molmil
CCDBVFI:GYRA14EC
分子名称: CHLORIDE ION, CcdB, DNA gyrase subunit A, ...
著者De Jonge, N, Simic, R, Buts, L, Haesaerts, S, Roelants, K, Garcia-Pino, A, Sterckx, Y, De Greve, H, Lah, J, Loris, R.
登録日2012-04-11
公開日2012-05-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.932 Å)
主引用文献Alternative interactions define gyrase specificity in the CcdB family.
Mol.Microbiol., 84, 2012
4HOH
DownloadVisualize
BU of 4hoh by Molmil
RIBONUCLEASE T1 (THR93ALA MUTANT) COMPLEXED WITH 2'GMP
分子名称: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, PROTEIN (RIBONUCLEASE T1)
著者Langhorst, U, Loris, R, Denisov, V.P, Doumen, J, Roose, P, Maes, D, Halle, B, Steyaert, J.
登録日1998-09-14
公開日1998-09-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Dissection of the structural and functional role of a conserved hydration site in RNase T1.
Protein Sci., 8, 1999
5J9I
DownloadVisualize
BU of 5j9i by Molmil
Crystal structure of the HigA2 antitoxin C-terminal domain
分子名称: Antitoxin igA-2
著者Hadzi, S, Loris, R.
登録日2016-04-10
公開日2017-04-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
7AEX
DownloadVisualize
BU of 7aex by Molmil
NRD-HEPN domains (N-terminal truncation) of Escherichia coli RnlA endoribonuclease
分子名称: mRNA endoribonuclease toxin LS
著者Garcia-Rodriguez, G, Loris, R.
登録日2020-09-18
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Alternative dimerization is required for activity and inhibition of the HEPN ribonuclease RnlA.
Nucleic Acids Res., 49, 2021
5JAA
DownloadVisualize
BU of 5jaa by Molmil
Crystal structure of the HigBA2 toxin-antitoxin complex
分子名称: Antitoxin igA-2, Toxin HigB-2
著者Hadzi, S, Loris, R.
登録日2016-04-12
公開日2017-04-05
最終更新日2017-05-17
実験手法X-RAY DIFFRACTION (2.993 Å)
主引用文献Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
5JA9
DownloadVisualize
BU of 5ja9 by Molmil
Crystal structure of the HigB2 toxin in complex with Nb6
分子名称: 1,2-ETHANEDIOL, Nanobody 6, SULFATE ION, ...
著者Hadzi, S, Loris, R.
登録日2016-04-12
公開日2017-04-05
最終更新日2017-05-17
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
5JA8
DownloadVisualize
BU of 5ja8 by Molmil
Crystal structure of the HigB2 toxin in complex with Nb2
分子名称: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Hadzi, S, Loris, R.
登録日2016-04-12
公開日2017-04-05
最終更新日2019-02-20
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a beta-strand sliding mechanism.
Nucleic Acids Res., 45, 2017
1G8W
DownloadVisualize
BU of 1g8w by Molmil
IMPROVED STRUCTURE OF PHYTOHEMAGGLUTININ-L FROM THE KIDNEY BEAN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, LEUCOAGGLUTINATING PHYTOHEMAGGLUTININ, ...
著者Buts, L, Hamelryck, T.W, Dao-Thi, M, Loris, R, Wyns, L, Etzler, M.E.
登録日2000-11-21
公開日2000-12-13
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Weak protein-protein interactions in lectins: the crystal structure of a vegetative lectin from the legume Dolichos biflorus.
J.Mol.Biol., 309, 2001
4Z33
DownloadVisualize
BU of 4z33 by Molmil
Crystal structure of the syntenin PDZ1 and PDZ2 tandem in complex with the Frizzled 7 C-terminal fragment and PIP2
分子名称: ACETATE ION, D-MYO-INOSITOL-4,5-BISPHOSPHATE, GLYCEROL, ...
著者Egea-Jimenez, A.L, Gallardo, R, Garcia-Pino, A, Ivarsson, Y, Wawrzyniak, A.M, Kashyap, R, Loris, R, Schymkowitz, J, Rousseau, F, Zimmermann, P.
登録日2015-03-30
公開日2016-06-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of the syntenin PDZ1 and PDZ2 tandem in complex with the Frizzled 7 C-terminal fragment and PIP2
To Be Published
8A0X
DownloadVisualize
BU of 8a0x by Molmil
Crystal structure of the HigB2-HigA2 tetramer in complex with operator DNA
分子名称: Antitoxin HigA-2, DNA (30-MER), DNA (31-MER), ...
著者Hadzi, S, Loris, R.
登録日2022-05-30
公開日2023-05-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.296 Å)
主引用文献Fuzzy DNA recognition by a prokaryotic transcription factor
To Be Published
8A0W
DownloadVisualize
BU of 8a0w by Molmil
Crystal structure of the HigA2 antitoxin in complex with operator DNA
分子名称: Antitoxin HigA-2, DNA (17-MER), PHOSPHATE ION
著者Hadzi, S, Loris, R.
登録日2022-05-30
公開日2023-05-03
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.334 Å)
主引用文献Fuzzy recognition by the prokaryotic transcription factor HigA2 from Vibrio cholerae.
Nat Commun, 15, 2024
8CJ5
DownloadVisualize
BU of 8cj5 by Molmil
Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 A651V mutant with bound phosphate
分子名称: PHOSPHATE ION, Phosphoenolpyruvate carboxylase 1
著者Haesaerts, S, Loris, R, Larsen, P.
登録日2023-02-12
公開日2024-02-21
実験手法X-RAY DIFFRACTION (3.00135279 Å)
主引用文献Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants
To Be Published
8CJ8
DownloadVisualize
BU of 8cj8 by Molmil
Arabidopsis thaliana Phosphoenolpyruvate carboxylase PPC1 mutant A651V in complex with L-malate
分子名称: (2S)-2-hydroxybutanedioic acid, CHLORIDE ION, Phosphoenolpyruvate carboxylase 1
著者Haesaerts, S, Loris, R, Larsen, P.B.
登録日2023-02-12
公開日2024-02-21
実験手法X-RAY DIFFRACTION (3.48991847 Å)
主引用文献Amino acid changes that deregulate PHOSPHOENOLPYRUVATE CARBOXYLASE in plants
To Be Published
8CO2
DownloadVisualize
BU of 8co2 by Molmil
YdaS N-terminal domain from prophage CP-933P in E. coli O157:H7
分子名称: ISOPROPYL ALCOHOL, Putative antirepressor protein Cro, SULFATE ION
著者Prolic-Kalinsek, M, Loris, R.
登録日2023-02-26
公開日2023-03-08
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.63880718 Å)
主引用文献YdaS from the Escherichia coli cryptic prophage CP-933P forms an evolutionary link between Cro repressors and HigA antitoxins
To Be Published
4ELZ
DownloadVisualize
BU of 4elz by Molmil
CCDBVFI:GYRA14VFI
分子名称: CcdB, DNA gyrase subunit A, GLYCEROL
著者De Jonge, N, Simic, M, Buts, L, Haesaerts, S, Roelants, K, Garcia-Pino, A, Sterckx, Y, De Greve, H, Lah, J, Loris, R.
登録日2012-04-11
公開日2012-05-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Alternative interactions define gyrase specificity in the CcdB family.
Mol.Microbiol., 84, 2012
5MI8
DownloadVisualize
BU of 5mi8 by Molmil
Structure of the phosphomimetic mutant of EF-Tu T383E
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, BETA-MERCAPTOETHANOL, ...
著者Talavera, A, Hendrix, J, Versees, W, De Gieter, S, Castro-Roa, D, Jurenas, D, Van Nerom, K, Vandenberk, N, Barth, A, De Greve, H, Hofkens, J, Zenkin, N, Loris, R, Garcia-Pino, A.
登録日2016-11-27
公開日2017-12-20
最終更新日2019-10-16
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors.
Sci Adv, 4, 2018
5MI3
DownloadVisualize
BU of 5mi3 by Molmil
Structure of phosphorylated translation elongation factor EF-Tu from E. coli
分子名称: Elongation factor Tu 1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Talavera, A, Hendrix, J, Versees, W, De Gieter, S, Castro-Roa, D, Jurenas, D, Van Nerom, K, Vandenberk, N, Barth, A, De Greve, H, Hofkens, J, Zenkin, N, Loris, R, Garcia-Pino, A.
登録日2016-11-27
公開日2017-12-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors.
Sci Adv, 4, 2018
2ENR
DownloadVisualize
BU of 2enr by Molmil
CO-CRYSTALS OF DEMETALLIZED CONCANAVALIN A WITH CADMIUM HAVING A CADMIUM ION BOUND IN BOTH THE S1 SITE AND THE S2 SITE
分子名称: CADMIUM ION, CONCANAVALIN A
著者Bouckaert, J, Loris, R, Wyns, L.
登録日1998-07-14
公開日1999-02-16
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Zinc/calcium- and cadmium/cadmium-substituted concanavalin A: interplay of metal binding, pH and molecular packing.
Acta Crystallogr.,Sect.D, 56, 2000

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon