4M83
 
 | | Ensemble refinement of protein crystal structure (2IYF) of macrolide glycosyltransferases OleD complexed with UDP and Erythromycin A | | 分子名称: | ERYTHROMYCIN A, MAGNESIUM ION, Oleandomycin glycosyltransferase, ... | | 著者 | Wang, F, Helmich, K.E, Xu, W, Singh, S, Olmos Jr, J.L, Martinez iii, E, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro) | | 登録日 | 2013-08-12 | | 公開日 | 2013-09-11 | | 最終更新日 | 2024-02-28 | | 実験手法 | X-RAY DIFFRACTION (1.698 Å) | | 主引用文献 | Crystal structure of macrolide glycosyltransferases OleD
To be Published
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5CK1
 | | selenomethionine BT4246 | | 分子名称: | 1,2-ETHANEDIOL, CALCIUM ION, SusD homolog | | 著者 | Koropatkin, N.M. | | 登録日 | 2015-07-15 | | 公開日 | 2016-10-12 | | 最終更新日 | 2024-11-20 | | 実験手法 | X-RAY DIFFRACTION (1.835 Å) | | 主引用文献 | Mechanistic insight into mucin degradation by the human gut microbiota reveals targeting of the glycoprotein core
to be published
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3UL4
 | | Crystal structure of Coh-OlpA(Cthe_3080)-Doc918(Cthe_0918) complex: A novel type I Cohesin-Dockerin complex from Clostridium thermocellum ATTC 27405 | | 分子名称: | CALCIUM ION, Cellulosome enzyme, dockerin type I, ... | | 著者 | Alves, V.D, Carvalho, A.L, Najmudin, S.H, Bras, J, Prates, J.A.M, Fontes, C.M.G.A. | | 登録日 | 2011-11-10 | | 公開日 | 2012-11-28 | | 最終更新日 | 2024-02-28 | | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | | 主引用文献 | Novel Clostridium thermocellum Type I Cohesin-Dockerin Complexes Reveal a Single Binding Mode.
J.Biol.Chem., 287, 2012
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5CK0
 | | BT4246 | | 分子名称: | NICKEL (II) ION, POTASSIUM ION, SusD homolog | | 著者 | Koropatkin, N.M. | | 登録日 | 2015-07-15 | | 公開日 | 2016-10-12 | | 最終更新日 | 2024-05-01 | | 実験手法 | X-RAY DIFFRACTION (1.996 Å) | | 主引用文献 | Mechanistic insight into mucin degradation by the human gut microbiota reveals targeting of the glycoprotein core
to be published
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5CJZ
 | | BT4246 with galactose | | 分子名称: | 1,2-ETHANEDIOL, CALCIUM ION, CESIUM ION, ... | | 著者 | Koropatkin, N.M. | | 登録日 | 2015-07-15 | | 公開日 | 2016-10-12 | | 最終更新日 | 2024-01-10 | | 実験手法 | X-RAY DIFFRACTION (1.803 Å) | | 主引用文献 | Mechanistic insight into mucin degradation by the human gut microbiota reveals targeting of the glycoprotein core
to be published
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1OH3
 | | E78R mutant of a carbohydrate binding module family 29 | | 分子名称: | NON-CATALYTIC PROTEIN 1, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose | | 著者 | Nurizzo, D, Gilbert, H.J, Davies, G.J. | | 登録日 | 2003-05-21 | | 公開日 | 2004-05-27 | | 最終更新日 | 2023-12-13 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | Ligand-Mediated Dimerization of a Carbohydrate -Binding Module Reveals a Novel Mechanism for Protein-Carbohydrate Recognition
J.Mol.Biol., 337, 2004
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6ZLT
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6YTC
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4DH2
 | | Crystal structure of Coh-OlpC(Cthe_0452)-Doc435(Cthe_0435) complex: A novel type I Cohesin-Dockerin complex from Clostridium thermocellum ATTC 27405 | | 分子名称: | CALCIUM ION, Cellulosome anchoring protein cohesin region, Dockerin type 1, ... | | 著者 | Alves, V.D, Carvalho, A.L, Najmudin, S.H, Bras, J, Prates, J.A.M, Fontes, C.M.G.A. | | 登録日 | 2012-01-27 | | 公開日 | 2012-11-28 | | 最終更新日 | 2023-09-13 | | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | | 主引用文献 | Novel Clostridium thermocellum Type I Cohesin-Dockerin Complexes Reveal a Single Binding Mode.
J.Biol.Chem., 287, 2012
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7T7Y
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7T7Z
 | | The crystal structure of family 8 carbohydrate-binding module from Dictyostelium discoideum | | 分子名称: | (2S)-2-hydroxybutanedioic acid, 1,2-ETHANEDIOL, Endoglucanase, ... | | 著者 | Marcelo, M.V, Campos, B.M, Squina, F.M. | | 登録日 | 2021-12-15 | | 公開日 | 2022-04-20 | | 最終更新日 | 2024-10-23 | | 実験手法 | X-RAY DIFFRACTION (1.46 Å) | | 主引用文献 | Unique properties of a Dictyostelium discoideum carbohydrate-binding module expand our understanding of CBM-ligand interactions.
J.Biol.Chem., 298, 2022
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1DYO
 | | Xylan-Binding Domain from CBM 22, formally x6b domain | | 分子名称: | CALCIUM ION, ENDO-1,4-BETA-XYLANASE Y | | 著者 | Davies, G.J, Charnock, S.J, Gilbert, H.J, Fontes, C.M.G.A. | | 登録日 | 2000-02-03 | | 公開日 | 2000-07-04 | | 最終更新日 | 2024-11-20 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | The X6 Thermostabilising Domains of Xylanases are Carbohydrate Binding Modules: Structure and Biochemistry of the Clostridium Thermocellum X6B Domain
Biochemistry, 39, 2000
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6ZLU
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6Z9A
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6ZM1
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6Z8I
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6ZAZ
 | | Fructo-oligosaccharide transporter BT 1762-63 | | 分子名称: | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CHLORIDE ION, MAGNESIUM ION, ... | | 著者 | van den Berg, B. | | 登録日 | 2020-06-06 | | 公開日 | 2020-11-18 | | 最終更新日 | 2024-10-09 | | 実験手法 | X-RAY DIFFRACTION (2.69 Å) | | 主引用文献 | Insights into SusCD-mediated glycan import by a prominent gut symbiont.
Nat Commun, 12, 2021
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8AA4
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8AA1
 | | Core SusCD transporter units from the levan utilisome with levan fructo-oligosaccharides DP 8-12 | | 分子名称: | MAGNESIUM ION, SusC homolog, SusD homolog, ... | | 著者 | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | | 登録日 | 2022-06-29 | | 公開日 | 2023-06-07 | | 最終更新日 | 2024-11-06 | | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | | 主引用文献 | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
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8AA0
 | | Levan utilisation machinery (utilisome) with levan fructo-oligosaccharides DP 8-12 | | 分子名称: | DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ... | | 著者 | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | | 登録日 | 2022-06-29 | | 公開日 | 2023-06-07 | | 最終更新日 | 2024-11-13 | | 実験手法 | ELECTRON MICROSCOPY (3.2 Å) | | 主引用文献 | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
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8AA2
 | | Inactive levan utilisation machinery (utilisome) in the presence of levan fructo-oligosaccharides DP 15-25 | | 分子名称: | DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ... | | 著者 | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | | 登録日 | 2022-06-29 | | 公開日 | 2023-06-07 | | 最終更新日 | 2024-11-20 | | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | | 主引用文献 | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
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8AA3
 | | Core SusCD transporter units from the inactive levan utilisome in the presence of levan fructo-oligosaccharides DP 15-25 | | 分子名称: | MAGNESIUM ION, SusC homolog, SusD homolog, ... | | 著者 | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | | 登録日 | 2022-06-29 | | 公開日 | 2023-06-07 | | 最終更新日 | 2024-10-23 | | 実験手法 | ELECTRON MICROSCOPY (2.7 Å) | | 主引用文献 | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
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8A9Y
 | | Substrate-free levan utilisation machinery (utilisome) | | 分子名称: | DUF4960 domain-containing protein, Glycoside hydrolase family 32, MAGNESIUM ION, ... | | 著者 | White, J.B.R, Silale, A, Ranson, N.A, van den Berg, B. | | 登録日 | 2022-06-29 | | 公開日 | 2023-06-07 | | 最終更新日 | 2024-07-24 | | 実験手法 | ELECTRON MICROSCOPY (3.5 Å) | | 主引用文献 | Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes.
Nature, 618, 2023
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1H41
 | | Pseudomonas cellulosa E292A alpha-D-glucuronidase mutant complexed with aldotriuronic acid | | 分子名称: | 1,2-ETHANEDIOL, 4-O-methyl-alpha-D-glucopyranuronic acid, ALPHA-GLUCURONIDASE, ... | | 著者 | Nurizzo, D, Nagy, T, Gilbert, H.J, Davies, G.J. | | 登録日 | 2002-09-25 | | 公開日 | 2003-05-01 | | 最終更新日 | 2023-12-13 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | The Alpha-Glucuronidase,Glca67A,of Cellvibrio Japonicus Utilizes the Carboxylate and Methyl Groups of Aldobiouronic Acid as Important Substrate Recognition Determinants
J.Biol.Chem., 278, 2003
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1GW1
 | | Substrate distortion by beta-mannanase from Pseudomonas cellulosa | | 分子名称: | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DINITROPHENYLENE, MANNAN ENDO-1,4-BETA-MANNOSIDASE, ... | | 著者 | Ducros, V, Zechel, D.L, Gilbert, H.J, Szabo, L, Withers, S.G, Davies, G.J. | | 登録日 | 2002-03-01 | | 公開日 | 2002-09-05 | | 最終更新日 | 2024-11-06 | | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | | 主引用文献 | Substrate Distortion by a Beta-Mannanase: Snapshots of the Michaelis and Covalent-Intermediate Complexes Suggest a B2,5 Conformation for the Transition State
Angew.Chem.Int.Ed.Engl., 41, 2002
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