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6C3K
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BU of 6c3k by Molmil
Apo crystal structure of S. aureus penicillin binding protein 4 (PBP4) mutant (E183A, F241R)
分子名称: CHLORIDE ION, Penicillin-binding protein 4, SODIUM ION, ...
著者Alexander, J.A.N, Strynadka, N.C.J.
登録日2018-01-10
公開日2018-11-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and kinetic analyses of penicillin-binding protein 4 (PBP4)-mediated antibiotic resistance inStaphylococcus aureus.
J. Biol. Chem., 293, 2018
6CO9
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BU of 6co9 by Molmil
Crystal structure of Rhodococcus jostii RHA1 IpdAB COCHEA-COA complex
分子名称: Probable CoA-transferase alpha subunit, Probable CoA-transferase beta subunit, S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (5R,10R)-7-hydroxy-10-methyl-2-oxo-1-oxaspiro[4.5]dec-6-ene-6-carbothioate (non-preferred name), ...
著者Crowe, A.M, Workman, S.D, Watanabe, N, Worrall, L.J, Strynadka, N.C.J, Eltis, L.D.
登録日2018-03-12
公開日2018-03-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献IpdAB, a virulence factor inMycobacterium tuberculosis, is a cholesterol ring-cleaving hydrolase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CB2
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BU of 6cb2 by Molmil
Crystal structure of Escherichia coli UppP
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, SULFATE ION, Undecaprenyl-diphosphatase
著者Workman, S.D, Worrall, L.J, Strynadka, N.C.J.
登録日2018-02-01
公開日2018-03-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of an intramembranal phosphatase central to bacterial cell-wall peptidoglycan biosynthesis and lipid recycling.
Nat Commun, 9, 2018
6COJ
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BU of 6coj by Molmil
Crystal structure of Rhodococcus jostii RHA1 IpdAB E105A COCHEA-COA complex
分子名称: Probable CoA-transferase alpha subunit, Probable CoA-transferase beta subunit, S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (5R,10R)-7-hydroxy-10-methyl-2-oxo-1-oxaspiro[4.5]dec-6-ene-6-carbothioate (non-preferred name), ...
著者Crowe, A.M, Workman, S.D, Watanabe, N, Worrall, L.J, Strynadka, N.C.J, Eltis, L.D.
登録日2018-03-12
公開日2018-03-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献IpdAB, a virulence factor inMycobacterium tuberculosis, is a cholesterol ring-cleaving hydrolase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6C39
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BU of 6c39 by Molmil
Apo crystal structure of wild-type S. aureus penicillin binding protein 4 (PBP4)
分子名称: SODIUM ION, SULFATE ION, Serine-type D-Ala-D-Ala carboxypeptidase, ...
著者Alexander, J.A.N, Strynadka, N.C.J.
登録日2018-01-09
公開日2018-11-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Structural and kinetic analyses of penicillin-binding protein 4 (PBP4)-mediated antibiotic resistance inStaphylococcus aureus.
J. Biol. Chem., 293, 2018
6CON
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BU of 6con by Molmil
Crystal structure of Mycobacterium tuberculosis IpdAB
分子名称: CoA-transferase subunit alpha, CoA-transferase subunit beta
著者Crowe, A.M, Workman, S.D, Watanabe, N, Worrall, L.J, Strynadka, N.C.J, Eltis, L.D.
登録日2018-03-12
公開日2018-03-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献IpdAB, a virulence factor inMycobacterium tuberculosis, is a cholesterol ring-cleaving hydrolase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CO6
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BU of 6co6 by Molmil
Crystal structure of Rhodococcus jostii RHA1 IpdAB
分子名称: GLYCEROL, Probable CoA-transferase alpha subunit, Probable CoA-transferase beta subunit, ...
著者Crowe, A.M, Workman, S.D, Watanabe, N, Worrall, L.J, Strynadka, N.C.J, Eltis, L.D.
登録日2018-03-12
公開日2018-03-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献IpdAB, a virulence factor inMycobacterium tuberculosis, is a cholesterol ring-cleaving hydrolase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1Q16
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BU of 1q16 by Molmil
Crystal structure of Nitrate Reductase A, NarGHI, from Escherichia coli
分子名称: (1S)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PENTANOYLOXY)METHYL]ETHYL OCTANOATE, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, FE3-S4 CLUSTER, ...
著者Bertero, M.G, Strynadka, N.C.J.
登録日2003-07-18
公開日2003-10-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Insights into the respiratory electron transfer pathway from the structure of nitrate reductase A
Nat.Struct.Biol., 10, 2003
1Y5I
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BU of 1y5i by Molmil
The crystal structure of the NarGHI mutant NarI-K86A
分子名称: (1S)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PENTANOYLOXY)METHYL]ETHYL OCTANOATE, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, FE3-S4 CLUSTER, ...
著者Bertero, M.G, Rothery, R.A, Boroumand, N, Palak, M, Blasco, F, Ginet, N, Weiner, J.H, Strynadka, N.C.J.
登録日2004-12-02
公開日2005-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and Biochemical Characterization of a Quinol Binding Site of Escherichia coli Nitrate Reductase A
J.Biol.Chem., 280, 2005
1XOU
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BU of 1xou by Molmil
Crystal structure of the CesA-EspA complex
分子名称: EspA, Z5138 gene product
著者Yip, C.K, Finlay, B.B, Strynadka, N.C.J.
登録日2004-10-06
公開日2004-12-28
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural characterization of a type III secretion system filament protein in complex with its chaperone.
Nat.Struct.Mol.Biol., 12, 2005
1Y5L
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BU of 1y5l by Molmil
The crystal structure of the NarGHI mutant NarI-H66Y
分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ...
著者Bertero, M.G, Rothery, R.A, Boroumand, N, Palak, M, Blasco, F, Ginet, N, Weiner, J.H, Strynadka, N.C.J.
登録日2004-12-02
公開日2005-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Biochemical Characterization of a Quinol Binding Site of Escherichia coli Nitrate Reductase A
J.Biol.Chem., 280, 2005
1Y4Z
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BU of 1y4z by Molmil
The crystal structure of Nitrate Reductase A, NarGHI, in complex with the Q-site inhibitor pentachlorophenol
分子名称: (1S)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PENTANOYLOXY)METHYL]ETHYL OCTANOATE, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ...
著者Bertero, M.G, Rothery, R.A, Boroumand, N, Palak, M, Blasco, F, Ginet, N, Weiner, J.H, Strynadka, N.C.J.
登録日2004-12-01
公開日2005-03-08
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and Biochemical Characterization of a Quinol Binding Site of Escherichia coli Nitrate Reductase A
J.Biol.Chem., 280, 2005
1Y5N
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BU of 1y5n by Molmil
The crystal structure of the NarGHI mutant NarI-K86A in complex with pentachlorophenol
分子名称: (1S)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PENTANOYLOXY)METHYL]ETHYL OCTANOATE, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, FE3-S4 CLUSTER, ...
著者Bertero, M.G, Rothery, R.A, Boroumand, N, Palak, M, Blasco, F, Ginet, N, Weiner, J.H, Strynadka, N.C.J.
登録日2004-12-02
公開日2005-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Biochemical Characterization of a Quinol Binding Site of Escherichia coli Nitrate Reductase A
J.Biol.Chem., 280, 2005
3ECH
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BU of 3ech by Molmil
The MarR-family repressor MexR in complex with its antirepressor ArmR
分子名称: 25-mer fragment of protein ArmR, Multidrug resistance operon repressor
著者Wilke, M.S, Strynadka, N.C.J.
登録日2008-08-30
公開日2008-10-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献The crystal structure of MexR from Pseudomonas aeruginosa in complex with its antirepressor ArmR
Proc.Natl.Acad.Sci.Usa, 105, 2008
3EGW
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BU of 3egw by Molmil
The crystal structure of the NarGHI mutant NarH - C16A
分子名称: (1S)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PENTANOYLOXY)METHYL]ETHYL OCTANOATE, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, ...
著者Bertero, M.G, Rothery, R.A, Weiner, J.H, Strynadka, N.C.J.
登録日2008-09-11
公開日2010-03-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献When width is more important than height: Barriers to electron transfer in E.coli nitrate reductase
To be Published
1K0W
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BU of 1k0w by Molmil
CRYSTAL STRUCTURE OF L-RIBULOSE-5-PHOSPHATE 4-EPIMERASE
分子名称: L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE, ZINC ION
著者Luo, Y, Samuel, J, Mosimann, S.C, Lee, J.E, Strynadka, N.C.J.
登録日2001-09-21
公開日2003-01-28
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of L-ribulose-5-phosphate 4-epimerase: an aldolase-like platform for epimerization
Biochemistry, 40, 2001
1ERM
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BU of 1erm by Molmil
X-RAY CRYSTAL STRUCTURE OF TEM-1 BETA LACTAMASE IN COMPLEX WITH A DESIGNED BORONIC ACID INHIBITOR (1R)-1-ACETAMIDO-2-(3-CARBOXYPHENYL)ETHANE BORONIC ACID
分子名称: 1(R)-1-ACETAMIDO-2-(3-CARBOXYPHENYL)ETHYL BORONIC ACID, TEM-1 BETA-LACTAMASE
著者Ness, S, Martin, R, Kindler, A.M, Paetzel, M, Gold, M, Jones, J.B, Strynadka, N.C.J.
登録日2000-04-06
公開日2000-05-10
最終更新日2012-06-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-based design guides the improved efficacy of deacylation transition state analogue inhibitors of TEM-1 beta-Lactamase(,).
Biochemistry, 39, 2000
8SXR
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BU of 8sxr by Molmil
Crystal structure of SARS-CoV-2 Mpro with C5a
分子名称: 3C-like proteinase nsp5, N-[(4-chlorothiophen-2-yl)methyl]-N-[4-(dimethylamino)phenyl]-2-(5-hydroxyisoquinolin-4-yl)acetamide
著者Worrall, L.J, Kenward, C, Lee, J, Strynadka, N.C.J.
登録日2023-05-23
公開日2023-08-30
実験手法X-RAY DIFFRACTION (2.114 Å)
主引用文献A novel class of broad-spectrum active-site-directed 3C-like protease inhibitors with nanomolar antiviral activity against highly immune-evasive SARS-CoV-2 Omicron subvariants.
Emerg Microbes Infect, 12, 2023
8TDH
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BU of 8tdh by Molmil
Structure of trehalose bound Alistipes sp. Glucoside-3-dehydrogenase AL3
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Predicted dehydrogenases and related proteins, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
登録日2023-07-03
公開日2024-06-19
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 2024
8TDE
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BU of 8tde by Molmil
Structure of glucose bound Bacteroides thetaiotaomicron 3-Keto-2-hydroxy-glucal-hydratase BT2
分子名称: POTASSIUM ION, Probable secreted glycosyl hydrolase, alpha-D-glucopyranose
著者Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
登録日2023-07-02
公開日2024-06-12
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 2024
8TDA
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BU of 8tda by Molmil
Structure of Bacteroides thetaiotaomicron 3-Keto-2-hydroxy-glucal-hydratase BT2
分子名称: POTASSIUM ION, Probable secreted glycosyl hydrolase
著者Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
登録日2023-07-02
公開日2024-06-12
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 2024
8TDF
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BU of 8tdf by Molmil
Structure of Alistipes sp. Glucoside-3-dehydrogenase AL3
分子名称: Dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
登録日2023-07-02
公開日2024-06-12
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 2024
8TCT
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BU of 8tct by Molmil
Structure of 3K-GlcH bound Bacteroides thetaiotaomicron 3-Keto-beta-glucopyranoside-1,2-Lyase BT1
分子名称: 1,5-anhydro-D-ribo-hex-3-ulose, COBALT (II) ION, PHOSPHATE ION, ...
著者Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
登録日2023-07-02
公開日2024-06-12
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 2024
8TCD
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BU of 8tcd by Molmil
Structure of Alistipes sp. 3-Keto-beta-glucopyranoside-1,2-Lyase AL1
分子名称: ACETATE ION, COBALT (II) ION, GLYCEROL, ...
著者Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
登録日2023-06-30
公開日2024-06-12
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 2024
8TDI
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BU of 8tdi by Molmil
Structure of P2B11 Glucuronide-3-dehydrogenase
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, P2B11 Glucuronide-3-dehydrogenase, ...
著者Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J.
登録日2023-07-03
公開日2024-06-12
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献An alternative broad-specificity pathway for glycan breakdown in bacteria.
Nature, 2024

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