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5COU
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BU of 5cou by Molmil
Structure and mechanism of a eukaryal nick-sealing RNA ligase K170M+ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, Naegleria gruberi RNA ligase
著者Unciuleac, M.C, Goldgur, Y, Shuman, S.
登録日2015-07-20
公開日2015-10-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and two-metal mechanism of a eukaryal nick-sealing RNA ligase.
Proc.Natl.Acad.Sci.USA, 112, 2015
7KW9
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BU of 7kw9 by Molmil
NMR Structure of a tRNA 2'-phosphotransferase from Runella slithyformis in complex with NAD+
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, tRNA 2'-phosphotransferase
著者Alphonse, S, Dantuluri, S, Banerjee, A, Shuman, S, Ghose, R.
登録日2020-11-30
公開日2021-10-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR solution structures of Runella slithyformis RNA 2'-phosphotransferase Tpt1 provide insights into NAD+ binding and specificity.
Nucleic Acids Res., 49, 2021
7KW8
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BU of 7kw8 by Molmil
NMR Structure of a tRNA 2'-phosphotransferase from Runella slithyformis
分子名称: tRNA 2'-phosphotransferase
著者Alphonse, S, Dantuluri, S, Banerjee, A, Shuman, S, Ghose, R.
登録日2020-11-30
公開日2021-10-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR solution structures of Runella slithyformis RNA 2'-phosphotransferase Tpt1 provide insights into NAD+ binding and specificity.
Nucleic Acids Res., 49, 2021
1D8H
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BU of 1d8h by Molmil
X-RAY CRYSTAL STRUCTURE OF YEAST RNA TRIPHOSPHATASE IN COMPLEX WITH SULFATE AND MANGANESE IONS.
分子名称: MANGANESE (II) ION, SULFATE ION, mRNA TRIPHOSPHATASE CET1
著者Lima, C.D, Wang, L.K, Shuman, S.
登録日1999-10-24
公開日1999-11-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and mechanism of yeast RNA triphosphatase: an essential component of the mRNA capping apparatus.
Cell(Cambridge,Mass.), 99, 1999
7MQW
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BU of 7mqw by Molmil
Histidine triad protein
分子名称: HIT family protein, SULFATE ION
著者Ghosh, S, Goldgur, Y, Shuman, S.
登録日2021-05-06
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Histidine triad protein
Unpublished
7LD5
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BU of 7ld5 by Molmil
polynucleotide phosphorylase
分子名称: MAGNESIUM ION, Polyribonucleotide nucleotidyltransferase, poly-A RNA fragment
著者Goldgur, Y, Shuman, S, De La Cruz, M.J, Ghosh, S, Unciuleac, M.-C.
登録日2021-01-12
公開日2021-06-30
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Structure and mechanism of Mycobacterium smegmatis polynucleotide phosphorylase.
Rna, 27, 2021
1D8I
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BU of 1d8i by Molmil
X-RAY CRYSTAL STRUCTURE OF YEAST RNA TRIPHOSPHATASE IN COMPLEX WITH A SULFATE ION.
分子名称: MRNA TRIPHOSPHATASE CET1, SULFATE ION
著者Lima, C.D, Wang, L.K, Shuman, S.
登録日1999-10-24
公開日1999-11-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure and mechanism of yeast RNA triphosphatase: an essential component of the mRNA capping apparatus.
Cell(Cambridge,Mass.), 99, 1999
4WAN
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BU of 4wan by Molmil
Crystal structure of Msl5 protein in complex with RNA at 1.8 A
分子名称: ACETATE ION, Branchpoint-bridging protein, GLYCEROL, ...
著者Jacewicz, A, Smith, P, Chico, L, Schwer, B, Shuman, S.
登録日2014-08-29
公開日2014-12-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs.
Rna, 21, 2015
4WAL
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BU of 4wal by Molmil
Crystal structure of selenomethionine Msl5 protein in complex with RNA at 2.2 A
分子名称: Branchpoint-bridging protein, CHLORIDE ION, GLYCEROL, ...
著者Jacewicz, A, Smith, P, Chico, L, Schwer, B, Shuman, S.
登録日2014-08-29
公開日2014-12-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs.
Rna, 21, 2015
4XBA
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BU of 4xba by Molmil
Hnt3
分子名称: Aprataxin-like protein, GLYCEROL, GUANOSINE, ...
著者Jacewicz, A, Chauleau, M, Shuman, S.
登録日2014-12-16
公開日2015-06-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献DNA3'pp5'G de-capping activity of aprataxin: effect of cap nucleoside analogs and structural basis for guanosine recognition.
Nucleic Acids Res., 43, 2015
8DCD
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BU of 8dcd by Molmil
RNA ligase RtcB from Pyrococcus horikoshii in complex with Zn2+ and GTP
分子名称: CHLORIDE ION, GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Jacewicz, A, Dantuluri, S, Shuman, S.
登録日2022-06-16
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Structures of RNA ligase RtcB in complexes with divalent cations and GTP.
Rna, 28, 2022
8DC9
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BU of 8dc9 by Molmil
RNA ligase RtcB from Pyrococcus horikoshii in complex with Mn2+ and GTP
分子名称: CHLORIDE ION, GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
著者Jacewicz, A, Dantuluri, S, Shuman, S.
登録日2022-06-16
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Structures of RNA ligase RtcB in complexes with divalent cations and GTP.
Rna, 28, 2022
8DCG
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BU of 8dcg by Molmil
Structure of guanylylated RNA ligase RtcB from Pyrococcus horikoshii
分子名称: CHLORIDE ION, GUANOSINE-5'-MONOPHOSPHATE, SULFATE ION, ...
著者Jacewicz, A, Dantuluri, S, Shuman, S.
登録日2022-06-16
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structures of RNA ligase RtcB in complexes with divalent cations and GTP.
Rna, 28, 2022
8DCB
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BU of 8dcb by Molmil
RNA ligase RtcB from Pyrococcus horikoshii in complex with Ni2+ and GTP
分子名称: CHLORIDE ION, GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Jacewicz, A, Dantuluri, S, Shuman, S.
登録日2022-06-16
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of RNA ligase RtcB in complexes with divalent cations and GTP.
Rna, 28, 2022
8DCF
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BU of 8dcf by Molmil
RNA ligase RtcB from Pyrococcus horikoshii in complex with Cu2+ and GTP
分子名称: CHLORIDE ION, COPPER (II) ION, GLYCEROL, ...
著者Jacewicz, A, Dantuluri, S, Shuman, S.
登録日2022-06-16
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Structures of RNA ligase RtcB in complexes with divalent cations and GTP.
Rna, 28, 2022
8DCA
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BU of 8dca by Molmil
RNA ligase RtcB from Pyrococcus horikoshii in complex with Co2+ and GTP
分子名称: COBALT (II) ION, GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Jacewicz, A, Dantuluri, S, Shuman, S.
登録日2022-06-16
公開日2022-10-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structures of RNA ligase RtcB in complexes with divalent cations and GTP.
Rna, 28, 2022
7LFQ
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BU of 7lfq by Molmil
Pyrococcus RNA ligase
分子名称: DNA (5'-D(*AP*TP*GP*TP*CP*C)-3'), POTASSIUM ION, RNA-splicing ligase RtcB, ...
著者Goldgur, Y, Shuman, S, Banerjee, A.
登録日2021-01-18
公開日2021-03-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of 3'-PO 4 /5'-OH RNA ligase RtcB in complex with a 5'-OH oligonucleotide.
Rna, 27, 2021
7LHL
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BU of 7lhl by Molmil
cryo-EM structure of Mycobacterium smegmatis Lhr helicase C-terminal domain
分子名称: ATP-dependent DNA helicase
著者Wang, J, Warren, G.M, Shuman, S, Patel, D.J.
登録日2021-01-25
公開日2021-04-07
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Oligomeric quaternary structure of Escherichia coli and Mycobacterium smegmatis Lhr helicases is nucleated by a novel C-terminal domain composed of five winged-helix modules.
Nucleic Acids Res., 49, 2021
8TG4
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BU of 8tg4 by Molmil
tRNA 2'-phosphotransferase (Tpt1) from Aeropyrum pernix in complex with ADP-ribose-2"-phosphate and 2'-OH RNA
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, NITRATE ION, ...
著者Jacewicz, A, Dantuluri, S, Shuman, S.
登録日2023-07-12
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD.
Proc.Natl.Acad.Sci.USA, 120, 2023
8TFI
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BU of 8tfi by Molmil
tRNA 2'-phosphotransferase (Tpt1) from Pyrococcus horikoshii
分子名称: CHLORIDE ION, Probable RNA 2'-phosphotransferase
著者Jacewicz, A, Dantuluri, S, Shuman, S.
登録日2023-07-11
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD.
Proc.Natl.Acad.Sci.USA, 120, 2023
8TG3
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BU of 8tg3 by Molmil
tRNA 2'-phosphotransferase (Tpt1) from Aeropyrum pernix in complex with ADP-ribose-1" -phosphate
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, NITRATE ION, ...
著者Jacewicz, A, Dantuluri, S, Shuman, S.
登録日2023-07-12
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD.
Proc.Natl.Acad.Sci.USA, 120, 2023
8TFX
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BU of 8tfx by Molmil
tRNA 2'-phosphotransferase (Tpt1) from Pyrococcus horikoshii in complex with 2',5'-ADP
分子名称: 1,2-ETHANEDIOL, ADENOSINE-2'-5'-DIPHOSPHATE, CHLORIDE ION, ...
著者Jacewicz, A, Dantuluri, S, Shuman, S.
登録日2023-07-12
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD.
Proc.Natl.Acad.Sci.USA, 120, 2023
8TFZ
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BU of 8tfz by Molmil
tRNA 2'-phosphotransferase (Tpt1) from Pyrococcus horikoshii in complex with NAD
分子名称: CHLORIDE ION, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Jacewicz, A, Dantuluri, S, Shuman, S.
登録日2023-07-12
公開日2023-11-08
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD.
Proc.Natl.Acad.Sci.USA, 120, 2023
8TFY
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BU of 8tfy by Molmil
tRNA 2'-phosphotransferase (Tpt1) from Pyrococcus horikoshii in complex with NADP
分子名称: CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Probable RNA 2'-phosphotransferase
著者Jacewicz, A, Dantuluri, S, Shuman, S.
登録日2023-07-12
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD.
Proc.Natl.Acad.Sci.USA, 120, 2023
8TG6
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BU of 8tg6 by Molmil
tRNA 2'-phosphotransferase (Tpt1) from Aeropyrum pernix in complex with sulfate anions
分子名称: CHLORIDE ION, Probable RNA 2'-phosphotransferase, SULFATE ION
著者Jacewicz, A, Dantuluri, S, Shuman, S.
登録日2023-07-12
公開日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD.
Proc.Natl.Acad.Sci.USA, 120, 2023

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