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The Structure Of The Complex Of The Fab Fragment Of The Esterolytic Antibody MS6-164 and A Transition-State Analog
分子名称:	IMMUNOGLOBULIN MS6-164, N-{[2-({[1-(4-CARBOXYBUTANOYL)AMINO]-2-PHENYLETHYL}-HYDROXYPHOSPHINYL)OXY]ACETYL}-2-PHENYLETHYLAMINE, SULFATE ION
著者	Ruzheinikov, S.N, Muranova, T.A, Sedelnikova, S.E, Partridge, L.J, Blackburn, G.M, Murray, I.A, Kakinuma, H, Takashi, N, Shimazaki, K, Sun, J, Nishi, Y, Rice, D.W.
登録日	2002-08-19
公開日	2003-09-23
最終更新日	2011-11-16
実験手法	X-RAY DIFFRACTION (2.1 Å)
主引用文献	High-resolution crystal structure of the Fab-fragments of a family of mouse catalytic antibodies with esterase activity J.Mol.Biol., 332, 2003

1MJ8

High Resolution Crystal Structure Of The Fab Fragment of The Esterolytic Antibody MS6-126
分子名称:	GLYCEROL, IMMUNOGLOBULIN MS6-126, PHOSPHATE ION
著者	Ruzheinikov, S.N, Muranova, T.A, Sedelnikova, S.E, Partridge, L.J, Blackburn, G.M, Murray, I.A, Kakinuma, H, Takashi, N, Shimazaki, K, Sun, J, Nishi, Y, Rice, D.W.
登録日	2002-08-27
公開日	2003-09-23
最終更新日	2011-07-13
実験手法	X-RAY DIFFRACTION (1.75 Å)
主引用文献	High-resolution crystal structure of the Fab-fragments of a family of mouse catalytic antibodies with esterase activity J.Mol.Biol., 332, 2003

1MJU

1.22 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF ESTEROLYTIC ANTIBODY MS6-12
分子名称:	GLYCEROL, IMMUNOGLOBULIN MS6-12
著者	Ruzheinikov, S.N, Muranova, T.A, Sedelnikova, S.E, Partridge, L.J, Blackburn, G.M, Murray, I.A, Kakinuma, H, Takashi, N, Shimazaki, K, Sun, J, Nishi, Y, Rice, D.W.
登録日	2002-08-28
公開日	2003-09-23
最終更新日	2019-12-25
実験手法	X-RAY DIFFRACTION (1.22 Å)
主引用文献	High-resolution crystal structure of the Fab-fragments of a family of mouse catalytic antibodies with esterase activity J.Mol.Biol., 332, 2003

1MJ7

Crystal Structure Of The Complex Of The Fab fragment of Esterolytic Antibody MS5-393 and A Transition-State Analog
分子名称:	IMMUNOGLOBULIN MS5-393, N-{[2-({[1-(4-CARBOXYBUTANOYL)AMINO]-2-PHENYLETHYL}-HYDROXYPHOSPHINYL)OXY]ACETYL}-2-PHENYLETHYLAMINE
著者	Ruzheinikov, S.N, Muranova, T.A, Sedelnikova, S.E, Partridge, L.J, Blackburn, G.M, Murray, I.A, Kakinuma, H, Takashi, N, Shimazaki, K, Sun, J, Nishi, Y, Rice, D.W.
登録日	2002-08-27
公開日	2003-09-23
最終更新日	2011-11-16
実験手法	X-RAY DIFFRACTION (2.25 Å)
主引用文献	High-resolution crystal structure of the Fab-fragments of a family of mouse catalytic antibodies with esterase activity J.Mol.Biol., 332, 2003

3B2C

Crystal structure of the collagen triple helix model [{PRO-HYP(R)-GLY}4-{HYP(S)-Pro-GLY}2-{PRO-HYP(R)-GLY}4]3
分子名称:	Collagen-like peptide
著者	Motooka, D, Kawahara, K, Nakamura, S, Doi, M, Nishi, Y, Nishiuchi, Y, Nakazawa, T, Yoshida, T, Ohkubo, T, Kobayashi, Y, Kang, Y.K, Uchiyama, S.
登録日	2011-07-26
公開日	2012-04-04
実験手法	X-RAY DIFFRACTION (1.36 Å)
主引用文献	The triple helical structure and stability of collagen model peptide with 4(S)-hydroxyprolyl-pro-gly units Biopolymers, 98, 2011

1MBJ

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3
分子名称:	MYB PROTO-ONCOGENE PROTEIN
著者	Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y.
登録日	1995-05-19
公開日	1995-07-31
最終更新日	2024-06-05
実験手法	SOLUTION NMR
主引用文献	Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb. Nat.Struct.Biol., 2, 1995

1MBK

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3
分子名称:	MYB PROTO-ONCOGENE PROTEIN
著者	Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y.
登録日	1995-05-19
公開日	1995-07-31
最終更新日	2024-06-05
実験手法	SOLUTION NMR
主引用文献	Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb. Nat.Struct.Biol., 2, 1995

1MBE

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 1
分子名称:	MYB PROTO-ONCOGENE PROTEIN
著者	Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y.
登録日	1995-05-19
公開日	1995-07-31
最終更新日	2024-06-05
実験手法	SOLUTION NMR
主引用文献	Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb. Nat.Struct.Biol., 2, 1995

1MBH

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2
分子名称:	C-MYB
著者	Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y.
登録日	1995-05-19
公開日	1995-09-15
最終更新日	2024-06-05
実験手法	SOLUTION NMR
主引用文献	Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb. Nat.Struct.Biol., 2, 1995

1MBG

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2
分子名称:	MYB PROTO-ONCOGENE PROTEIN
著者	Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y.
登録日	1995-05-19
公開日	1995-07-31
最終更新日	2024-06-05
実験手法	SOLUTION NMR
主引用文献	Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb. Nat.Struct.Biol., 2, 1995

1EOL

Design of P1' and P3' residues of trivalent thrombin inhibitors and their crystal structures
分子名称:	ALPHA THROMBIN, THROMBIN INHIBITOR P628
著者	Slon-Usakiewicz, J.J, Sivaraman, J, Li, Y, Cygler, M, Konishi, Y.
登録日	2000-03-23
公開日	2000-05-03
最終更新日	2023-11-15
実験手法	X-RAY DIFFRACTION (2.1 Å)
主引用文献	Design of P1' and P3' residues of trivalent thrombin inhibitors and their crystal structures. Biochemistry, 39, 2000

5WSF

Crystal structure of a cupin protein (tm1459) in osmium (Os)-substituted form II
分子名称:	OSMIUM ION, Uncharacterized protein tm1459
著者	Fujieda, N, Nakano, T, Taniguchi, Y, Ichihashi, H, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日	2016-12-06
公開日	2017-05-31
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.11 Å)
主引用文献	A Well-Defined Osmium-Cupin Complex: Hyperstable Artificial Osmium Peroxygenase J. Am. Chem. Soc., 2017

1MSE

SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES
分子名称:	C-Myb DNA-Binding Domain, DNA (5'-D(APTPGPTPGPTPGPTPCPAPGPTPTPAPGPG)-3'), DNA (5'-D(CPCPTPAPAPCPTPGPAPCPAPCPAPCPAPT)-3')
著者	Ogata, K, Morikawa, S, Nakamura, H, Sekikawa, A, Inoue, T, Kanai, H, Sarai, A, Ishii, S, Nishimura, Y.
登録日	1995-01-24
公開日	1995-03-31
最終更新日	2024-05-22
実験手法	SOLUTION NMR
主引用文献	Solution structure of a specific DNA complex of the Myb DNA-binding domain with cooperative recognition helices. Cell(Cambridge,Mass.), 79, 1994

1ETL

STRUCTURAL CHARACTERISTICS FOR BIOLOGICAL ACTIVITY OF HEAT-STABLE ENTEROTOXIN PRODUCED BY ENTEROTOXIGENIC ESCHERICHIA COLI: X-RAY CRYSTALLOGRAPHY OF WEAKLY TOXIC AND NONTOXIC ANALOGS
分子名称:	5-BETA-MERCAPTOPROPIONATE HEAT-STABLE ENTEROTOXIN
著者	Sato, T, Shimonishi, Y.
登録日	1994-03-15
公開日	1996-01-29
最終更新日	2021-11-03
実験手法	X-RAY DIFFRACTION (0.89 Å)
主引用文献	Structural characteristics for biological activity of heat-stable enterotoxin produced by enterotoxigenic Escherichia coli: X-ray crystallography of weakly toxic and nontoxic analogs. Biochemistry, 33, 1994

1ETM

STRUCTURAL CHARACTERISTICS FOR BIOLOGICAL ACTIVITY OF HEAT-STABLE ENTEROTOXIN PRODUCED BY ENTEROTOXIGENIC ESCHERICHIA COLI: X-RAY CRYSTALLOGRAPHY OF WEAKLY TOXIC AND NONTOXIC ANALOGS
分子名称:	5-BETA-MERCAPTOPROPIONATE HEAT-STABLE ENTEROTOXIN
著者	Sato, T, Shimonishi, Y.
登録日	1994-03-15
公開日	1996-01-29
最終更新日	2021-11-03
実験手法	X-RAY DIFFRACTION (0.89 Å)
主引用文献	Structural characteristics for biological activity of heat-stable enterotoxin produced by enterotoxigenic Escherichia coli: X-ray crystallography of weakly toxic and nontoxic analogs. Biochemistry, 33, 1994

5HWS

Crystal structure of ketopantoate reductase from Thermococcus kodakarensis complexed with NADP+
分子名称:	2-dehydropantoate 2-reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者	Aikawa, Y, Nishitani, Y, Miki, K.
登録日	2016-01-29
公開日	2016-05-18
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Crystal structure of ketopantoate reductase from Thermococcus kodakarensis complexed with NADP+ Acta Crystallogr.,Sect.F, 72, 2016

2RO0

Solution structure of the knotted tudor domain of the yeast histone acetyltransferase, Esa1
分子名称:	Histone acetyltransferase ESA1
著者	Shimojo, H, Sano, N, Moriwaki, Y, Okuda, M, Horikoshi, M, Nishimura, Y.
登録日	2008-03-01
公開日	2008-04-29
最終更新日	2024-05-29
実験手法	SOLUTION NMR
主引用文献	Novel structural and functional mode of a knot essential for RNA binding activity of the Esa1 presumed chromodomain J.Mol.Biol., 378, 2008

5IJA

[NiFe] hydrogenase maturation protease HybD from Thermococcus kodakarensis
分子名称:	Hydrogenase-specific maturation endopeptidase
著者	Kwon, S, Nishitani, Y, Watanabe, S, Miki, K.
登録日	2016-03-01
公開日	2016-06-01
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.82 Å)
主引用文献	Crystal structure of a [NiFe] hydrogenase maturation protease HybD from Thermococcus kodakarensis KOD1 Proteins, 84, 2016

2RNZ

Solution structure of the presumed chromodomain of the yeast histone acetyltransferase, Esa1
分子名称:	Histone acetyltransferase ESA1
著者	Shimojo, H, Sano, N, Moriwaki, Y, Okuda, M, Horikoshi, M, Nishimura, Y.
登録日	2008-03-01
公開日	2008-04-29
最終更新日	2024-05-29
実験手法	SOLUTION NMR
主引用文献	Novel structural and functional mode of a knot essential for RNA binding activity of the Esa1 presumed chromodomain J.Mol.Biol., 378, 2008

2RNQ

Solution structure of the C-terminal acidic domain of TFIIE alpha
分子名称:	Transcription initiation factor IIE subunit alpha
著者	Okuda, M, Nishimura, Y.
登録日	2008-01-31
公開日	2008-04-01
最終更新日	2024-05-29
実験手法	SOLUTION NMR
主引用文献	Structural insight into the TFIIE-TFIIH interaction: TFIIE and p53 share the binding region on TFIIH Embo J., 27, 2008

2RSO

Solution structure of the chromodomain of Swi6
分子名称:	Chromatin-associated protein swi6
著者	Shimojo, H, Nishimura, Y.
登録日	2012-04-18
公開日	2012-08-29
最終更新日	2024-05-15
実験手法	SOLUTION NMR
主引用文献	Intrinsic nucleic Acid-binding activity of chp1 chromodomain is required for heterochromatic gene silencing Mol.Cell, 47, 2012

1ETN

MOLECULAR STRUCTURE OF THE TOXIC DOMAIN OF HEAT-STABLE ENTEROTOXIN PRODUCED BY A PATHOGENIC STRAIN OF ESCHERICHIA COLI
分子名称:	5-BETA-MERCAPTOPROPIONATE HEAT-STABLE ENTEROTOXIN
著者	Sato, T, Shimonishi, Y.
登録日	1994-03-15
公開日	1996-01-29
最終更新日	2017-11-29
実験手法	X-RAY DIFFRACTION (0.89 Å)
主引用文献	Molecular structure of the toxin domain of heat-stable enterotoxin produced by a pathogenic strain of Escherichia coli. A putative binding site for a binding protein on rat intestinal epithelial cell membranes. J.Biol.Chem., 266, 1991

2RVM

Solution structure of the chromodomain of HP1alpha with the phosphorylated N-terminal tail
分子名称:	Chromobox protein homolog 5
著者	Kawaguchi, A, Nishimura, Y.
登録日	2015-12-18
公開日	2016-03-16
最終更新日	2023-06-14
実験手法	SOLUTION NMR
主引用文献	Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail Sci Rep, 6, 2016

2RVB

Solution structure of the complex between XPC acidic domain and TFIIH p62 PH domain
分子名称:	DNA repair protein complementing XP-C cells, General transcription factor IIH subunit 1
著者	Okuda, M, Nishimura, Y.
登録日	2015-07-01
公開日	2015-09-09
最終更新日	2024-05-01
実験手法	SOLUTION NMR
主引用文献	Structural Insight into the Mechanism of TFIIH Recognition by the Acidic String of the Nucleotide Excision Repair Factor XPC. Structure, 23, 2015

3VS9

Crystal structure of type III PKS ArsC mutant
分子名称:	SODIUM ION, TETRAETHYLENE GLYCOL, Type III polyketide synthase
著者	Satou, R, Miyanaga, A, Ozawa, H, Funa, N, Miyazono, K, Tanokura, M, Ohnishi, Y, Horinouchi, S.
登録日	2012-04-23
公開日	2013-04-24
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.99 Å)
主引用文献	Structural basis for cyclization specificity of two Azotobacter type III polyketide synthases: a single amino acid substitution reverses their cyclization specificity J.Biol.Chem., 288, 2013

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