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7OZZ
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BU of 7ozz by Molmil
The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG with LNA-amide modification
分子名称: DNA (5'-D(*CP*TP*(05H)P*TP*CP*TP*TP*TP*G)-3'), POTASSIUM ION, RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3')
著者Thorpe, C, Hardwick, J, McDonough, M.A, Hall, J.P, Baker, Y.R, El-Sagheer, A.H, Brown, T.
登録日2021-06-29
公開日2022-08-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献An LNA-amide modification that enhances the cell uptake and activity of phosphorothioate exon-skipping oligonucleotides.
Nat Commun, 13, 2022
8OE3
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BU of 8oe3 by Molmil
Crystal structure of the non-canonical quadruplex d(GCATGCT) before soaking
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*GP*CP*AP*TP*GP*CP*T)-3')
著者Lambert, M.C, Hall, J.P.
登録日2023-03-10
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Oxidative damage induce copper(II)-DNA binding
To Be Published
8OEB
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BU of 8oeb by Molmil
Crystal structure of the Z-DNA duplex d(CGCGCG) containing ordered copper(II) and soaked in hydrogen peroxide for 30 minutes, second collection at room temperature
分子名称: COPPER (II) ION, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), SPERMINE
著者Lambert, M.C, Hall, J.P.
登録日2023-03-10
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural analysis of peroxide-soaked DNA crystals containing ordered copper binding sites: towards understanding oxidative damage at the atomic scale
To Be Published
8OE8
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BU of 8oe8 by Molmil
Crystal structure of the Z-DNA duplex d(CGCGCG) containing ordered copper(II) and soaked in hydrogen peroxide for an hour
分子名称: COPPER (II) ION, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), HYDROGEN PEROXIDE, ...
著者Lambert, M.C, Hall, J.P.
登録日2023-03-10
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural analysis of peroxide-soaked DNA crystals containing ordered copper binding sites: towards understanding oxidative damage at the atomic scale
To Be Published
8OE7
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BU of 8oe7 by Molmil
Crystal structure of the Z-DNA duplex d(CGCGCG) containing ordered copper(II) and soaked in hydrogen peroxide for 5 minutes
分子名称: COPPER (II) ION, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), HYDROGEN PEROXIDE
著者Lambert, M.C, Hall, J.P.
登録日2023-03-10
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural analysis of peroxide-soaked DNA crystals containing ordered copper binding sites: towards understanding oxidative damage at the atomic scale
To Be Published
8OEX
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BU of 8oex by Molmil
Crystal structure of the native Z-DNA duplex d(CGCGCG) before soaking of CuCl2
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), SPERMINE
著者Lambert, M.C, Hall, J.P.
登録日2023-03-13
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Structural analysis of peroxide-soaked DNA crystals containing ordered copper binding sites: towards understanding oxidative damage at the atomic scale
To Be Published
8OEZ
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BU of 8oez by Molmil
Crystal structure of the Z-DNA hexamer d(CGCGCG) with Iron(II) chloride
分子名称: CHLORIDE ION, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), FE (II) ION
著者Lambert, M.C, Hall, J.P.
登録日2023-03-13
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Iron binding preferences: observing metal coordination before oxidative damage.
To Be Published
8OEA
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BU of 8oea by Molmil
Crystal structure of the Z-DNA duplex d(CGCGCG) soaked in copper(II) chloride, in preparation to hydrogen peroxide soaking, first collection at room temperature
分子名称: COPPER (II) ION, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
著者Lambert, M.C, Hall, J.P.
登録日2023-03-10
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural analysis of peroxide-soaked DNA crystals containing ordered copper binding sites: towards understanding oxidative damage at the atomic scale
To Be Published
8OE9
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BU of 8oe9 by Molmil
Crystal structure of the Z-DNA duplex d(CGCGCG) soaked in copper(II) chloride and hydrogen peroxide
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), SPERMINE
著者Lambert, M.C, Hall, J.P.
登録日2023-03-10
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Structural analysis of peroxide-soaked DNA crystals containing ordered copper binding sites: towards understanding oxidative damage at the atomic scale
To Be Published
8OEC
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BU of 8oec by Molmil
Crystal structure of the Z-DNA duplex d(CGCGCG) containing ordered copper(II) and soaked in hydrogen peroxide for another 30 minutes, third collection at room temperature
分子名称: COPPER (II) ION, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), SPERMINE
著者Lambert, M.C, Hall, J.P.
登録日2023-03-10
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural analysis of peroxide-soaked DNA crystals containing ordered copper binding sites: towards understanding oxidative damage at the atomic scale
To Be Published
8PJL
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BU of 8pjl by Molmil
DNA duplex forming base triplets in minor groove
分子名称: DNA (5'-D(*AP*AP*CP*TP*GP*AP*GP*AP*GP*AP*CP*GP*TP*A)-3'), DNA (5'-D(*TP*AP*CP*GP*TP*CP*TP*CP*TP*CP*AP*GP*TP*C)-3'), MAGNESIUM ION, ...
著者Abdullrahman, A, Cardin, C.J, Hall, J.P.
登録日2023-06-23
公開日2024-07-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献DNA duplex with triplets bases in minor groove
To Be Published
8PIP
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BU of 8pip by Molmil
DNA triplex structure with Polypyridyl Ruthenium Complexes
分子名称: CHLORIDE ION, DNA (31-MER), Delta-Ru(phen)2(dppz) complex, ...
著者Abdullrahman, A, Cardin, C.J, Hall, J.P.
登録日2023-06-22
公開日2024-07-10
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献DNA triplex structure with bound ruthenium polypyridyl complexes
To Be Published
4YMC
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BU of 4ymc by Molmil
Lambda-[Ru(TAP)2(dppz)]2+ bound to d(CCGGATCCGG)2
分子名称: BARIUM ION, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*GP*AP*TP*CP*CP*GP*G)-3'), ...
著者Gurung, S.P, Hall, J.P, Cardin, C.J.
登録日2015-03-06
公開日2016-03-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Reversal of a single base pair step controls guanine photo-oxidation by an intercalating Ru(II) dipyridophenazine complex.
To Be Published
8ASO
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BU of 8aso by Molmil
Nickel(II) bound to a non-canonical quadruplex
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*GP*CP*AP*TP*GP*CP*T)-3'), NICKEL (II) ION
著者Lambert, M.C, Hall, J.P.
登録日2022-08-19
公開日2023-08-30
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Identifying metal-DNA binding sites, what is the best method to get transition metals into a crystal system?
To Be Published
8ASM
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BU of 8asm by Molmil
Cobalt(II) bound to a non-canonical quadruplex
分子名称: COBALT (II) ION, COBALT HEXAMMINE(III), DNA (5'-D(*GP*CP*AP*TP*GP*CP*T)-3')
著者Lambert, M.C, Hall, J.P.
登録日2022-08-19
公開日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Identifying metal-DNA binding sites, what is the best method to get transition metals into a crystal system?
To Be Published
8BAG
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BU of 8bag by Molmil
Copper(II) bound to a non-canonical quadruplex containing the damaged base 8-oxoguanine
分子名称: COBALT HEXAMMINE(III), COPPER (II) ION, DNA (5'-D(*(8OG)P*CP*AP*TP*GP*CP*T)-3')
著者Lambert, M.C, Hall, J.P.
登録日2022-10-11
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Oxidative damage induce copper(II)-DNA binding
To Be Published
8BAE
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BU of 8bae by Molmil
Copper(II) bound to a non-canonical quadruplex
分子名称: COBALT HEXAMMINE(III), COPPER (II) ION, DNA (5'-D(*GP*CP*AP*TP*GP*CP*T)-3')
著者Lambert, M.C, Hall, J.P.
登録日2022-10-11
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Oxidative damage induce copper(II)-DNA binding
To Be Published
8BAF
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BU of 8baf by Molmil
Non-canonical quadruplex containing the oxidation product 8-oxoguanine
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*(8OG)P*CP*AP*TP*GP*CP*T)-3')
著者Lambert, M.C, Hall, J.P.
登録日2022-10-11
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Oxidative damage induce copper(II)-DNA binding
To Be Published
6G8S
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BU of 6g8s by Molmil
[Ru(TAP)2(11,12-CN2-dppz)]2+ bound to d(CCGGACCCGG/CCGGGTCCGG)2
分子名称: BARIUM ION, DNA (5'-D(*CP*CP*GP*GP*AP*CP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*GP*TP*CP*CP*GP*G)-3'), ...
著者McQuaid, K.T, Hall, J.P, Cardin, C.J.
登録日2018-04-09
公開日2019-04-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献X-ray Crystal Structures Show DNA Stacking Advantage of Terminal Nitrile Substitution in Ru-dppz Complexes.
Chemistry, 24, 2018
6HWG
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BU of 6hwg by Molmil
[Ru(phen)2(dppz-11-CN)]2+ bound to d(TCGGCGCCGA)2
分子名称: BARIUM ION, DNA (5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3'), Ruthenium (bis-(phenanthroline)) (11-cyano-dipyridophenazine)
著者McQuaid, K.T, Hall, J.P, Cardin, C.J.
登録日2018-10-11
公開日2019-10-30
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献[Ru(phen)2(dppz-11-CN)]2+ bound to d(TCGGCGCCGA)2
To Be Published
6GLD
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BU of 6gld by Molmil
Intercalation of [Ru(TAP)2(11-Br-dppz)]2+ bound to d(TCGGCGCCGA)2
分子名称: BARIUM ION, Ruthenium (bis-(tetraazaphenanthrene)) (11-bromo-dipyridophenazine), d(TCGGCGCCGA)2
著者McQuaid, K.T, Hall, J.P, Cardin, C.J.
登録日2018-05-23
公開日2019-06-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.061 Å)
主引用文献X-ray Crystal Structures Show DNA Stacking Advantage of Terminal Nitrile Substitution in Ru-dppz Complexes.
Chemistry, 24, 2018
3U38
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BU of 3u38 by Molmil
Intercalation of lambda-[Ru(phen)2(dppz)]2+ into d(CCGGTACCGG)2
分子名称: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3', BARIUM ION, Lambda-Ru(phen)2(dppz) complex
著者Cardin, C.J, Hall, J.P, Niyazi, H.
登録日2011-10-05
公開日2012-07-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structures of lambda-[Ru(phen)2dppz]2+ with oligonucleotides containing TA/TA and AT/AT steps show two intercalation modes
Nat Chem, 4, 2012
4QIO
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BU of 4qio by Molmil
Lambda-[Ru(TAP)2(dppz)]2+ bound to d(TCGGCGCCIA) at high resolution
分子名称: 5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*IP*A)-3', BARIUM ION, CHLORIDE ION, ...
著者Gurung, S.P, Hall, J.P, Cardin, C.J.
登録日2014-06-01
公開日2015-06-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Inosine Can Increase DNA's Susceptibility to Photo-oxidation by a Ru II Complex due to Structural Change in the Minor Groove.
Chemistry, 23, 2017
5NBE
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BU of 5nbe by Molmil
[Ru(TAP)2(dppz-11-CN)]2+ bound to d(TCGGCGCCGA)2
分子名称: BARIUM ION, DNA (5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3'), lambda-[Ru(tap2-dppz-CN)]2+
著者McQuaid, K.T, Hall, J.P, Cardin, C.J.
登録日2017-03-01
公開日2018-03-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献X-ray Crystal Structures Show DNA Stacking Advantage of Terminal Nitrile Substitution in Ru-dppz Complexes.
Chemistry, 24, 2018
3GOM
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BU of 3gom by Molmil
Barium bound to the Holliday junction sequence d(TCGGCGCCGA)4
分子名称: 5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3', BARIUM ION
著者Naseer, A, Cardin, C.J.
登録日2009-03-19
公開日2009-04-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure determination of an intercalating ruthenium dipyridophenazine complex which kinks DNA by semiintercalation of a tetraazaphenanthrene ligand.
Proc.Natl.Acad.Sci.USA, 108, 2011

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