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2RQF
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BU of 2rqf by Molmil
Solution structure of juvenile hormone binding protein from silkworm in complex with JH III
分子名称: Hemolymph juvenile hormone binding protein, methyl (2E,6E)-9-[(2R)-3,3-dimethyloxiran-2-yl]-3,7-dimethylnona-2,6-dienoate
著者Suzuki, R, Fujimoto, Z, Shiotsuki, T, Momma, M, Tase, A, Yamazaki, T.
登録日2009-04-27
公開日2010-05-05
最終更新日2013-06-19
実験手法SOLUTION NMR
主引用文献Structural mechanism of JH delivery in hemolymph by JHBP of silkworm, Bombyx mori
Sci Rep, 1, 2011
2G3J
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BU of 2g3j by Molmil
Structure of S.olivaceoviridis xylanase Q88A/R275A mutant
分子名称: PHOSPHATE ION, Xylanase, alpha-D-xylopyranose-(1-4)-alpha-D-xylopyranose
著者Diertavitian, S, Kaneko, S, Fujimoto, Z, Kuno, A, Johansson, E, Lo Leggio, L.
登録日2006-02-20
公開日2007-03-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure-based engineering of glucose specificity in a family 10 xylanase from Streptomyces olivaceoviridis E-86
PROCESS BIOCHEM, 47, 2012
1HVX
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BU of 1hvx by Molmil
BACILLUS STEAROTHERMOPHILUS ALPHA-AMYLASE
分子名称: ALPHA-AMYLASE, CALCIUM ION, SODIUM ION
著者Suvd, D, Fujimoto, Z, Takase, K, Matsumura, M, Mizuno, H.
登録日2001-01-08
公開日2001-01-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Bacillus stearothermophilus alpha-amylase: possible factors determining the thermostability.
J.Biochem., 129, 2001
1X2W
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BU of 1x2w by Molmil
Crystal Structure of Apo-Habu IX-bp at pH 4.6
分子名称: CHLORIDE ION, Coagulation factor IX/X-binding protein A chain, Coagulation factor IX/factor X-binding protein B chain, ...
著者Suzuki, N, Fujimoto, Z, Morita, T, Fukamizu, A, Mizuno, H.
登録日2005-04-26
公開日2005-10-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献pH-Dependent Structural Changes at Ca(2+)-binding sites of Coagulation Factor IX-binding Protein
J.Mol.Biol., 353, 2005
6LK7
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BU of 6lk7 by Molmil
crystal structure of Os1348 from Pseudomonas sp. Os17
分子名称: Nitrile hydratase, alpha chain
著者Takeuchi, K, Tsuchiya, W, Fujimoto, Z, Yamada, K, Someya, N, Yamazaki, T.
登録日2019-12-18
公開日2020-11-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Discovery of an Antibiotic-Related Small Protein of Biocontrol Strain Pseudomonas sp. Os17 by a Genome-Mining Strategy.
Front Microbiol, 11, 2020
1BJ3
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BU of 1bj3 by Molmil
CRYSTAL STRUCTURE OF COAGULATION FACTOR IX-BINDING PROTEIN (IX-BP) FROM VENOM OF HABU SNAKE WITH A HETERODIMER OF C-TYPE LECTIN DOMAINS
分子名称: CALCIUM ION, PROTEIN (COAGULATION FACTOR IX-BINDING PROTEIN A), PROTEIN (COAGULATION FACTOR IX-BINDING PROTEIN B)
著者Mizuno, H, Fujimoto, Z, Koizumi, M, Kano, H, Atoda, H, Morita, T.
登録日1998-07-02
公開日1999-08-16
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of coagulation factor IX-binding protein from habu snake venom at 2.6 A: implication of central loop swapping based on deletion in the linker region.
J.Mol.Biol., 289, 1999
2G3I
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BU of 2g3i by Molmil
Structure of S.olivaceoviridis xylanase Q88A/R275A mutant
分子名称: PHOSPHATE ION, Xylanase
著者Diertavitian, S, Kaneko, S, Fujimoto, Z, Kuno, A, Johansson, E, Lo Leggio, L.
登録日2006-02-20
公開日2007-03-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-based engineering of glucose specificity in a family 10 xylanase from Streptomyces olivaceoviridis E-86
PROCESS BIOCHEM, 47, 2012
2D22
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BU of 2d22 by Molmil
Crystal structure of covalent glycosyl-enzyme intermediate of catalytic-site mutant xylanase from Streptomyces olivaceoviridis E-86
分子名称: ENDO-1,4-BETA-D-XYLANASE, GLYCEROL, SULFATE ION, ...
著者Suzuki, R, Kuno, A, Fujimoto, Z, Ito, S, Kawahara, S.I, Kaneko, S, Hasegawa, T, Taira, K.
登録日2005-09-02
公開日2006-10-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallographic snapshots of an entire reaction cycle for a retaining xylanase from Streptomyces olivaceoviridis E-86
J.Biochem., 146, 2009
2D1Z
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BU of 2d1z by Molmil
Crystal structure of catalytic-site mutant xylanase from Streptomyces olivaceoviridis E-86
分子名称: ENDO-1,4-BETA-D-XYLANASE, GLYCEROL, SULFATE ION
著者Suzuki, R, Kuno, A, Fujimoto, Z, Ito, S, Kawahara, S.I, Kaneko, S, Hasegawa, T, Taira, K.
登録日2005-09-02
公開日2006-10-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallographic snapshots of an entire reaction cycle for a retaining xylanase from Streptomyces olivaceoviridis E-86
J.Biochem., 146, 2009
2D20
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Crystal structure of michaelis complex of catalytic-site mutant xylanase from Streptomyces olivaceoviridis E-86
分子名称: ENDO-1,4-BETA-D-XYLANASE, GLYCEROL, P-NITROPHENOL, ...
著者Suzuki, R, Kuno, A, Fujimoto, Z, Ito, S, Kawahara, S.I, Kaneko, S, Hasegawa, T, Taira, K.
登録日2005-09-02
公開日2006-10-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystallographic snapshots of an entire reaction cycle for a retaining xylanase from Streptomyces olivaceoviridis E-86
J.Biochem., 146, 2009
2D23
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BU of 2d23 by Molmil
Crystal structure of EP complex of catalytic-site mutant xylanase from Streptomyces olivaceoviridis E-86
分子名称: AZIDE ION, ENDO-1,4-BETA-D-XYLANASE, GLYCEROL, ...
著者Suzuki, R, Kuno, A, Fujimoto, Z, Ito, S, Kawahara, S.I, Kaneko, S, Hasegawa, T, Taira, K.
登録日2005-09-02
公開日2006-10-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystallographic snapshots of an entire reaction cycle for a retaining xylanase from Streptomyces olivaceoviridis E-86
J.Biochem., 146, 2009
2D24
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BU of 2d24 by Molmil
Crystal structure of ES complex of catalytic-site mutant xylanase from Streptomyces olivaceoviridis E-86
分子名称: ENDO-1,4-BETA-D-XYLANASE, GLYCEROL, SULFATE ION, ...
著者Suzuki, R, Kuno, A, Fujimoto, Z, Ito, S, Kawahara, S.I, Kaneko, S, Hasegawa, T, Taira, K.
登録日2005-09-02
公開日2006-10-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystallographic snapshots of an entire reaction cycle for a retaining xylanase from Streptomyces olivaceoviridis E-86
J.Biochem., 146, 2009
1J35
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BU of 1j35 by Molmil
Crystal Structure of Ca(II)-bound Gla Domain of Factor IX Complexed with Binding Protein
分子名称: CALCIUM ION, Coagulation factor IX, Coagulation factor IX-binding protein B chain, ...
著者Shikamoto, Y, Morita, T, Fujimoto, Z, Mizuno, H.
登録日2003-01-20
公開日2003-07-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Mg2+- and Ca2+-bound Gla Domain of Factor IX Complexed with Binding Protein
J.Biol.Chem., 278, 2003
1J34
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BU of 1j34 by Molmil
Crystal Structure of Mg(II)-and Ca(II)-bound Gla Domain of Factor IX Complexed with Binding Protein
分子名称: CALCIUM ION, Coagulation factor IX, MAGNESIUM ION, ...
著者Shikamoto, Y, Morita, T, Fujimoto, Z, Mizuno, H.
登録日2003-01-20
公開日2003-07-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structure of Mg2+- and Ca2+-bound Gla Domain of Factor IX Complexed with Binding Protein
J.Biol.Chem., 278, 2003
7BYT
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BU of 7byt by Molmil
Crystal structure of exo-beta-1,3-galactanase from Phanerochaete chrysosporium Pc1,3Gal43A with galactose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Matsuyama, K, Ishida, T, Kishine, N, Fujimoto, Z, Igarashi, K, Kaneko, S.
登録日2020-04-24
公開日2020-11-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Unique active-site and subsite features in the arabinogalactan-degrading GH43 exo-beta-1,3-galactanase from Phanerochaete chrysosporium .
J.Biol.Chem., 295, 2020
7BYX
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BU of 7byx by Molmil
Crystal structure of exo-beta-1,3-galactanase from Phanerochaete chrysosporium Pc1,3Gal43A E208A with beta-1,3-galactotriose
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Matsuyama, K, Ishida, T, Kishine, N, Fujimoto, Z, Igarashi, K, Kaneko, S.
登録日2020-04-24
公開日2020-11-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Unique active-site and subsite features in the arabinogalactan-degrading GH43 exo-beta-1,3-galactanase from Phanerochaete chrysosporium .
J.Biol.Chem., 295, 2020
7BYS
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BU of 7bys by Molmil
Crystal structure of exo-beta-1,3-galactanase from Phanerochaete chrysosporium Pc1,3Gal43A apo form
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CITRIC ACID, ...
著者Matsuyama, K, Ishida, T, Kishine, N, Fujimoto, Z, Igarashi, K, Kaneko, S.
登録日2020-04-24
公開日2020-11-04
最終更新日2021-01-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Unique active-site and subsite features in the arabinogalactan-degrading GH43 exo-beta-1,3-galactanase from Phanerochaete chrysosporium .
J.Biol.Chem., 295, 2020
7BYV
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BU of 7byv by Molmil
Crystal structure of exo-beta-1,3-galactanase from Phanerochaete chrysosporium Pc1,3Gal43A E208Q with beta-1,3-galactotriose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Galactan 1,3-beta-galactosidase, ...
著者Matsuyama, K, Ishida, T, Kishine, N, Fujimoto, Z, Igarashi, K, Kaneko, S.
登録日2020-04-24
公開日2020-11-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Unique active-site and subsite features in the arabinogalactan-degrading GH43 exo-beta-1,3-galactanase from Phanerochaete chrysosporium .
J.Biol.Chem., 295, 2020
2DS0
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BU of 2ds0 by Molmil
Crystal structure of the earthworm lectin C-terminal domain mutant in complex with 6'-sialyllactose
分子名称: 29-kDa galactose-binding lectin, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, SULFATE ION
著者Suzuki, R, Fujimoto, Z.
登録日2006-06-16
公開日2007-02-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Tailoring a novel sialic acid-binding lectin from a ricin-B chain-like galactose-binding protein by natural evolution-mimicry
J.Biochem., 141, 2007
2DRY
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BU of 2dry by Molmil
Crystal structure of the earthworm lectin C-terminal domain mutant
分子名称: 29-kDa galactose-binding lectin, SULFATE ION, TRIETHYLENE GLYCOL
著者Suzuki, R, Fujimoto, Z.
登録日2006-06-16
公開日2007-02-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Tailoring a novel sialic acid-binding lectin from a ricin-B chain-like galactose-binding protein by natural evolution-mimicry
J.Biochem., 141, 2007
2DRZ
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BU of 2drz by Molmil
Crystal structure of the earthworm lectin C-terminal domain mutant in complex with lactose
分子名称: 29-kDa galactose-binding lectin, SULFATE ION, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Suzuki, R, Fujimoto, Z.
登録日2006-06-16
公開日2007-02-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Tailoring a novel sialic acid-binding lectin from a ricin-B chain-like galactose-binding protein by natural evolution-mimicry
J.Biochem., 141, 2007
1UA7
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BU of 1ua7 by Molmil
Crystal Structure Analysis of Alpha-Amylase from Bacillus Subtilis complexed with Acarbose
分子名称: 4,6-dideoxy-alpha-D-xylo-hexopyranose-(1-4)-alpha-D-glucopyranose, 6-AMINO-4-HYDROXYMETHYL-CYCLOHEX-4-ENE-1,2,3-TRIOL, Alpha-amylase, ...
著者Kagawa, M, Fujimoto, Z, Momma, M, Takase, K, Mizuno, H.
登録日2003-03-03
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Crystal structure of Bacillus subtilis alpha-amylase in complex with acarbose
J.BACTERIOL., 185, 2003
1J2L
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BU of 1j2l by Molmil
Crystal structure of the disintegrin, trimestatin
分子名称: Disintegrin triflavin, SULFATE ION
著者Fujii, Y, Okuda, D, Fujimoto, Z, Morita, T, Mizuno, H.
登録日2003-01-06
公開日2003-10-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of Trimestatin, a Disintegrin Containing a Cell Adhesion Recognition Motif RGD
J.Mol.Biol., 332, 2003
2ZQO
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Crystal structure of the earthworm R-type lectin C-half in complex with GalNAc
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, 29-kDa galactose-binding lectin, CADMIUM ION, ...
著者Suzuki, R, Kuno, A, Hasegawa, T, Hirabayashi, J, Kasai, K, Momma, M, Fujimoto, Z.
登録日2008-08-13
公開日2008-09-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Sugar-complex structures of the C-half domain of the galactose-binding lectin EW29 from the earthworm Lumbricus terrestris
Acta Crystallogr.,Sect.D, 65, 2009
2ZQN
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Crystal structure of the earthworm R-type lectin C-half in complex with Lactose
分子名称: 29-kDa galactose-binding lectin, IMIDAZOLE, PHOSPHATE ION, ...
著者Suzuki, R, Kuno, A, Hasegawa, T, Hirabayashi, J, Kasai, K, Momma, M, Fujimoto, Z.
登録日2008-08-13
公開日2008-09-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Sugar-complex structures of the C-half domain of the galactose-binding lectin EW29 from the earthworm Lumbricus terrestris
Acta Crystallogr.,Sect.D, 65, 2009

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