Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1WJX
DownloadVisualize
BU of 1wjx by Molmil
Crystal sturucture of TT0801 from Thermus thermophilus
分子名称: POTASSIUM ION, SsrA-binding protein
著者Bessho, Y, Shibata, R, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-29
公開日2004-11-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for functional mimicry of long-variable-arm tRNA by transfer-messenger RNA.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3VPC
DownloadVisualize
BU of 3vpc by Molmil
ArgX from Sulfolobus tokodaii complexed with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Putative acetylornithine deacetylase
著者Tomita, T, Horie, A, Kuzuyama, T, Nishiyama, M.
登録日2012-02-29
公開日2013-02-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus.
Nat.Chem.Biol., 9, 2013
3VPB
DownloadVisualize
BU of 3vpb by Molmil
ArgX from Sulfolobus tokodaii complexed with LysW/Glu/ADP/Mg/Zn/Sulfate
分子名称: ADENOSINE-5'-DIPHOSPHATE, Alpha-aminoadipate carrier protein lysW, GLUTAMIC ACID, ...
著者Tomita, T, Ouchi, T, Kuzuyama, T, Nishiyama, M.
登録日2012-02-29
公開日2013-02-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus
Nat.Chem.Biol., 9, 2013
3VPD
DownloadVisualize
BU of 3vpd by Molmil
LysX from Thermus thermophilus complexed with AMP-PNP
分子名称: CITRIC ACID, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Ribosomal protein S6 modification protein, ...
著者Tomita, T, Ouchi, T, Kuzuyama, T, Nishiyama, M.
登録日2012-02-29
公開日2013-02-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus.
Nat.Chem.Biol., 9, 2013
3P0B
DownloadVisualize
BU of 3p0b by Molmil
Thermus thermophilus family GH57 branching enzyme: crystal structure, mechanism of action and products formed
分子名称: GLYCEROL, TT1467 protein
著者Pijning, T, Dijkstra, B.W.
登録日2010-09-28
公開日2010-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Thermus thermophilus GLYCOSYL HYDROLASE FAMILY 57 branching enzyme: crystal structure, mechanism of action and products formed
To be Published
1IOM
DownloadVisualize
BU of 1iom by Molmil
CRYSTAL STRUCTURE OF CITRATE SYNTHASE FROM THERMUS THERMOPHILUS HB8
分子名称: CARBONATE ION, CITRATE SYNTHASE, GLYCEROL, ...
著者Kanamori, E, Kouyama, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-03-19
公開日2003-07-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural comparison between the open and closed forms of citrate synthase from Thermus thermophilus HB8.
Biophys Physicobio., 12, 2015
1ART
DownloadVisualize
BU of 1art by Molmil
X-RAY CRYSTALLOGRAPHIC STUDY OF PYRIDOXAL 5'-PHOSPHATE-TYPE ASPARTATE AMINOTRANSFERASES FROM ESCHERICHIA COLI IN OPEN AND CLOSED FORM
分子名称: 2-methyl-L-aspartic acid, ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Higuchi, T, Hirotsu, K.
登録日1993-08-02
公開日1994-08-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic study of pyridoxal 5'-phosphate-type aspartate aminotransferases from Escherichia coli in open and closed form.
J.Biochem.(Tokyo), 116, 1994
1ARS
DownloadVisualize
BU of 1ars by Molmil
X-RAY CRYSTALLOGRAPHIC STUDY OF PYRIDOXAL 5'-PHOSPHATE-TYPE ASPARTATE AMINOTRANSFERASES FROM ESCHERICHIA COLI IN OPEN AND CLOSED FORM
分子名称: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Okamoto, A, Higuchi, T, Hirotsu, K.
登録日1993-08-02
公開日1994-08-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic study of pyridoxal 5'-phosphate-type aspartate aminotransferases from Escherichia coli in open and closed form.
J.Biochem.(Tokyo), 116, 1994
1WM6
DownloadVisualize
BU of 1wm6 by Molmil
Crystal structure of TT0310 protein from Thermus thermophilus HB8
分子名称: CHLORIDE ION, phenylacetic acid degradation protein PaaI
著者Sugahara, M, Kunishima, N, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-04
公開日2005-07-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
1WLV
DownloadVisualize
BU of 1wlv by Molmil
Crystal structure of TT0310 protein from Thermus thermophilus HB8
分子名称: ACETATE ION, CHLORIDE ION, COENZYME A, ...
著者Kunishima, N, Sugahara, M, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-06-29
公開日2005-07-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
1WP4
DownloadVisualize
BU of 1wp4 by Molmil
Structure of TT368 protein from Thermus Thermophilus HB8
分子名称: 3-hydroxyisobutyrate dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
著者Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-08-30
公開日2005-08-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Novel NADP-dependent 3-Hydroxyisobutyrate Dehydrogenase from Thermus thermophilus HB8
J.Mol.Biol., 352, 2005
1WM9
DownloadVisualize
BU of 1wm9 by Molmil
Structure of GTP cyclohydrolase I from Thermus thermophilus HB8
分子名称: GTP cyclohydrolase I, ZINC ION
著者Tanaka, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-05
公開日2005-07-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Novel Reaction Mechanism of GTP Cyclohydrolase I. High-Resolution X-Ray Crystallography of Thermus thermophilus HB8 Enzyme Complexed with a Transition State Analogue, the 8-Oxoguanine Derivative.
J.Biochem.(Tokyo), 138, 2005
1WLU
DownloadVisualize
BU of 1wlu by Molmil
Crystal structure of TT0310 protein from Thermus thermophilus HB8
分子名称: CHLORIDE ION, GLYCEROL, phenylacetic acid degradation protein PaaI
著者Kunishima, N, Sugahara, M, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-06-29
公開日2005-07-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
1WN3
DownloadVisualize
BU of 1wn3 by Molmil
Crystal structure of TT0310 protein from Thermus thermophilus HB8
分子名称: ACETATE ION, CHLORIDE ION, HEXANOYL-COENZYME A, ...
著者Kunishima, N, Sugahara, M, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-27
公開日2005-07-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
2GS9
DownloadVisualize
BU of 2gs9 by Molmil
Crystal structure of TT1324 from Thermus thermophilis HB8
分子名称: FORMIC ACID, Hypothetical protein TT1324, S-ADENOSYL-L-HOMOCYSTEINE
著者Kamitori, S, Abe, A, Ebihara, A, Kanagawa, M, Nakagawa, N, Kuroishi, C, Agari, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-25
公開日2007-03-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of TT1324 from Thermus thermophilis HB8
To be Published
1DJU
DownloadVisualize
BU of 1dju by Molmil
CRYSTAL STRUCTURE OF AROMATIC AMINOTRANSFERASE FROM PYROCOCCUS HORIKOSHII OT3
分子名称: AROMATIC AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
著者Matsui, I, Matsui, E, Sakai, Y, Kikuchi, H, Kawarabayashi, H.
登録日1999-12-06
公開日2001-04-11
最終更新日2018-04-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The molecular structure of hyperthermostable aromatic aminotransferase with novel substrate specificity from Pyrococcus horikoshii.
J.Biol.Chem., 275, 2000
3EOQ
DownloadVisualize
BU of 3eoq by Molmil
The crystal structure of putative zinc protease beta-subunit from Thermus thermophilus HB8
分子名称: Putative zinc protease
著者Ohtsuka, J, Ichihara, Y, Ebihara, A, Yokoyama, S, Kuramitsu, S, Nagata, K, Tanokura, M.
登録日2008-09-29
公開日2009-03-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Crystal structure of TTHA1264, a putative M16-family zinc peptidase from Thermus thermophilus HB8 that is homologous to the beta subunit of mitochondrial processing peptidase.
Proteins, 2009
4NZY
DownloadVisualize
BU of 4nzy by Molmil
Crystal structure (type-2) of dTMP kinase (st1543) from Sulfolobus Tokodaii Strain7
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Biswas, A, Jeyakanthan, J, Sekar, K, Kuramitsu, S, Yokoyama, S.
登録日2013-12-13
公開日2014-12-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Insight into Substrate Binding Mechanism in Thymidylate Kinase based on Intrinsic Dynamics of the Active Site
To be Published
1SPA
DownloadVisualize
BU of 1spa by Molmil
ROLE OF ASP222 IN THE CATALYTIC MECHANISM OF ESCHERICHIA COLI ASPARTATE AMINOTRANSFERASE: THE AMINO ACID RESIDUE WHICH ENHANCES THE FUNCTION OF THE ENZYME-BOUND COENZYME PYRIDOXAL 5'-PHOSPHATE
分子名称: ASPARTATE AMINOTRANSFERASE, N-METHYL-4-DEOXY-4-AMINO-PYRIDOXAL-5-PHOSPHATE
著者Hinoue, Y, Yano, T, Metzler, D.E, Miyahara, I, Hirotsu, K, Kagamiyama, H.
登録日1993-01-26
公開日1993-10-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Role of Asp222 in the catalytic mechanism of Escherichia coli aspartate aminotransferase: the amino acid residue which enhances the function of the enzyme-bound coenzyme pyridoxal 5'-phosphate.
Biochemistry, 31, 1992
1V3W
DownloadVisualize
BU of 1v3w by Molmil
Structure of Ferripyochelin binding protein from Pyrococcus horikoshii OT3
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Jeyakanthan, J, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-11-07
公開日2003-11-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Observation of a calcium-binding site in the gamma-class carbonic anhydrase from Pyrococcus horikoshii.
Acta Crystallogr.,Sect.D, 64, 2008
1V67
DownloadVisualize
BU of 1v67 by Molmil
Structure of ferripyochelin binding protein from pyrococcus horikoshii OT3
分子名称: BICARBONATE ION, CALCIUM ION, ZINC ION, ...
著者Jeyakanthan, J, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-11-27
公開日2003-12-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Observation of a calcium-binding site in the gamma-class carbonic anhydrase from Pyrococcus horikoshii.
Acta Crystallogr.,Sect.D, 64, 2008
1IV0
DownloadVisualize
BU of 1iv0 by Molmil
Solution structure of the YqgF-family protein (N-terminal fragment)
分子名称: hypothetical protein
著者Inoue, M, Kigawa, T, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-08
公開日2003-10-07
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the YqgF-family protein (N-terminal fragment)
To be published
1CKH
DownloadVisualize
BU of 1ckh by Molmil
T70V MUTANT HUMAN LYSOZYME
分子名称: PROTEIN (LYSOZYME)
著者Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
登録日1999-04-22
公開日1999-04-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1CKD
DownloadVisualize
BU of 1ckd by Molmil
T43V MUTANT HUMAN LYSOZYME
分子名称: PROTEIN (LYSOZYME), SODIUM ION
著者Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
登録日1999-04-22
公開日1999-04-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
1CJ9
DownloadVisualize
BU of 1cj9 by Molmil
T40V MUTANT HUMAN LYSOZYME
分子名称: PROTEIN (LYSOZYME), SODIUM ION
著者Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
登録日1999-04-22
公開日1999-04-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon