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8GXU
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BU of 8gxu by Molmil
1 ATP-bound V1EG of V/A-ATPase from Thermus thermophilus
分子名称: ADENOSINE-5'-TRIPHOSPHATE, SULFATE ION, V-type ATP synthase alpha chain, ...
著者Nakanishi, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
登録日2022-09-21
公開日2023-01-25
最終更新日2023-02-15
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Cryo-EM analysis of V/A-ATPase intermediates reveals the transition of the ground-state structure to steady-state structures by sequential ATP binding.
J.Biol.Chem., 299, 2023
8HH4
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BU of 8hh4 by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3,101 degrees, highATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
著者Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
登録日2022-11-16
公開日2023-07-19
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
8HH1
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BU of 8hh1 by Molmil
FoF1-ATPase from Bacillus PS3, 81 degrees, highATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ATP synthase subunit alpha, ...
著者Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
登録日2022-11-16
公開日2023-07-19
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
8HHA
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BU of 8hha by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3,120 degrees,lowATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
著者Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
登録日2022-11-16
公開日2023-07-19
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
8HH3
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BU of 8hh3 by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3,90 degrees,highATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
著者Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
登録日2022-11-16
公開日2023-07-19
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
8HHB
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BU of 8hhb by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3,step waiting,lowATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
著者Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
登録日2022-11-16
公開日2023-07-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
8HH2
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BU of 8hh2 by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3,post-hyd,highATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
著者Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
登録日2022-11-16
公開日2023-07-19
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
8HHC
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BU of 8hhc by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3,post-hyd',lowATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ATP synthase subunit alpha, ...
著者Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
登録日2022-11-16
公開日2023-07-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
8HH9
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BU of 8hh9 by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3, 90 degrees, low ATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
著者Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
登録日2022-11-16
公開日2023-07-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
8HH6
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BU of 8hh6 by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3,step waiting,highATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
著者Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
登録日2022-11-16
公開日2023-07-26
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
8HH7
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BU of 8hh7 by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3, 81 degrees, lowATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
著者Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
登録日2022-11-16
公開日2023-07-26
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
8HH8
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BU of 8hh8 by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3,post-hyd,lowATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
著者Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
登録日2022-11-16
公開日2023-07-26
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
8HH5
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BU of 8hh5 by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3,120 degrees,highATP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
著者Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
登録日2022-11-16
公開日2023-07-26
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
4PYA
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BU of 4pya by Molmil
MoaC K51A in complex with 3',8-cH2GTP
分子名称: (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate, 1,2-ETHANEDIOL, Molybdenum cofactor biosynthesis protein MoaC
著者Tonthat, N.K, Hover, B.M, Yokoyama, K, Schumacher, M.A.
登録日2014-03-26
公開日2015-04-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.789 Å)
主引用文献Mechanism of pyranopterin ring formation in molybdenum cofactor biosynthesis.
Proc.Natl.Acad.Sci.USA, 112, 2015
4PYD
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BU of 4pyd by Molmil
MoaC in complex with cPMP crystallized in space group P212121
分子名称: (2R,4AR,5AR,11AR,12AS)-8-AMINO-2-HYDROXY-4A,5A,9,11,11A,12A-HEXAHYDRO[1,3,2]DIOXAPHOSPHININO[4',5':5,6]PYRANO[3,2-G]PTERIDINE-10,12(4H,6H)-DIONE 2-OXIDE, 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ...
著者Tonthat, N.K, Hover, B.M, Yokoyama, K, Schumacher, M.A.
登録日2014-03-26
公開日2015-04-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.186 Å)
主引用文献Mechanism of pyranopterin ring formation in molybdenum cofactor biosynthesis.
Proc.Natl.Acad.Sci.USA, 112, 2015
7XKP
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BU of 7xkp by Molmil
F1 domain of epsilon C-terminal domain deleted FoF1 from Bacillus PS3,state1,unisite condition
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP synthase gamma chain, ATP synthase subunit alpha, ...
著者Nakano, A, Kishikawa, J, Nakanishi, A, Mitsuoka, K, Yokoyama, K.
登録日2022-04-20
公開日2022-09-21
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis of unisite catalysis of bacterial F 0 F 1 -ATPase.
Pnas Nexus, 1, 2022
7XKO
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BU of 7xko by Molmil
F1 domain of epsilon C-terminal domain deleted FoF1 from Bacillus PS3,state1,nucleotide depeleted
分子名称: ATP synthase gamma chain, ATP synthase subunit alpha, ATP synthase subunit beta, ...
著者Nakano, A, Kishikawa, J, Nakanishi, A, Mitsuoka, K, Yokoyama, K.
登録日2022-04-20
公開日2022-09-21
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis of unisite catalysis of bacterial F 0 F 1 -ATPase.
Pnas Nexus, 1, 2022
7XKR
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BU of 7xkr by Molmil
F1 domain of FoF1-ATPase with the up form of epsilon subunit from Bacillus PS3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Nakano, A, Kishikawa, J, Nakanishi, A, Mitsuoka, K, Yokoyama, K.
登録日2022-04-20
公開日2022-09-21
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis of unisite catalysis of bacterial F 0 F 1 -ATPase.
Pnas Nexus, 1, 2022
7XKH
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BU of 7xkh by Molmil
Nucleotide-depleted F1 domain of FoF1-ATPase from Bacillus PS3, state1
分子名称: ATP synthase epsilon chain, ATP synthase gamma chain, ATP synthase subunit alpha, ...
著者Nakano, A, Kishikawa, J, Nakanishi, A, Mitsuoka, K, Yokoyama, K.
登録日2022-04-19
公開日2022-09-21
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis of unisite catalysis of bacterial F 0 F 1 -ATPase.
Pnas Nexus, 1, 2022
7XKQ
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BU of 7xkq by Molmil
F1 domain of FoF1-ATPase with the down form of epsilon subunit from Bacillus PS3
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Nakano, A, Kishikawa, J, Nakanishi, A, Mitsuoka, K, Yokoyama, K.
登録日2022-04-20
公開日2022-09-21
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis of unisite catalysis of bacterial F 0 F 1 -ATPase.
Pnas Nexus, 1, 2022
5Y60
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BU of 5y60 by Molmil
V/A-type ATPase/synthase from Thermus thermophilus, rotational state 3.
分子名称: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
著者Nakanishi, A, Kishikawa, J, Tamakoshi, M, Mitsuoka, K, Yokoyama, K.
登録日2017-08-10
公開日2018-01-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献Cryo EM structure of intact rotary H+-ATPase/synthase from Thermus thermophilus
Nat Commun, 9, 2018
5Y5Y
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BU of 5y5y by Molmil
V/A-type ATPase/synthase from Thermus thermophilus, peripheral domain, rotational state 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
著者Nakanishi, A, Kishikawa, J, Tamakoshi, M, Mitsuoka, K, Yokoyama, K.
登録日2017-08-10
公開日2018-01-24
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Cryo EM structure of intact rotary H+-ATPase/synthase from Thermus thermophilus
Nat Commun, 9, 2018
5Y5X
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BU of 5y5x by Molmil
V/A-type ATPase/synthase from Thermus thermophilus, rotational state 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
著者Nakanishi, A, Kishikawa, J, Tamakoshi, M, Mitsuoka, K, Yokoyama, K.
登録日2017-08-10
公開日2018-01-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Cryo EM structure of intact rotary H+-ATPase/synthase from Thermus thermophilus
Nat Commun, 9, 2018
5Y5Z
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BU of 5y5z by Molmil
V/A-type ATPase/synthase from Thermus thermophilus, rotational state 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
著者Nakanishi, A, Kishikawa, J, Tamakoshi, M, Mitsuoka, K, Yokoyama, K.
登録日2017-08-10
公開日2018-01-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (6.7 Å)
主引用文献Cryo EM structure of intact rotary H+-ATPase/synthase from Thermus thermophilus
Nat Commun, 9, 2018
7VAU
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BU of 7vau by Molmil
V1EG of V/A-ATPase from Thermus thermophilus at low ATP concentration, state2-2
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Kishikawa, J, Nakanishi, A, Nakano, A, Saeki, S, Furuta, A, Kato, T, Mitsuoka, K, Yokoyama, K.
登録日2021-08-30
公開日2022-07-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural snapshots of V/A-ATPase reveal the rotary catalytic mechanism of rotary ATPases.
Nat Commun, 13, 2022

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