7YK9
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![BU of 7yk9 by Molmil](/molmil-images/mine/7yk9) | Neutron Structure of PcyA I86D Mutant Complexed with Biliverdin at Room Temperature | 分子名称: | 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Phycocyanobilin:ferredoxin oxidoreductase | 著者 | Unno, M, Igarashi, K. | 登録日 | 2022-07-22 | 公開日 | 2023-01-25 | 最終更新日 | 2024-04-03 | 実験手法 | NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION | 主引用文献 | Neutron crystallography and quantum chemical analysis of bilin reductase PcyA mutants reveal substrate and catalytic residue protonation states. J.Biol.Chem., 299, 2022
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7YKB
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![BU of 7ykb by Molmil](/molmil-images/mine/7ykb) | Neutron Structure of PcyA D105N Mutant Complexed with Biliverdin at Room Temperature | 分子名称: | 3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Phycocyanobilin:ferredoxin oxidoreductase, SODIUM ION | 著者 | Unno, M, Nanasawa, R. | 登録日 | 2022-07-22 | 公開日 | 2023-01-25 | 最終更新日 | 2024-04-03 | 実験手法 | NEUTRON DIFFRACTION (1.38 Å), X-RAY DIFFRACTION | 主引用文献 | Neutron crystallography and quantum chemical analysis of bilin reductase PcyA mutants reveal substrate and catalytic residue protonation states. J.Biol.Chem., 299, 2022
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4J20
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![BU of 4j20 by Molmil](/molmil-images/mine/4j20) | X-ray structure of the cytochrome c-554 from chlorobaculum tepidum | 分子名称: | Cytochrome c-555, HEME B/C, ISOPROPYL ALCOHOL, ... | 著者 | Unno, M, Yu, L.J, Wang-otomo, Z.Y. | 登録日 | 2013-02-04 | 公開日 | 2013-10-02 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.3 Å) | 主引用文献 | Structure analysis and characterization of the cytochrome c-554 from thermophilic green sulfur photosynthetic bacterium Chlorobaculum tepidum Photosynth.Res., 118, 2013
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5HP5
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![BU of 5hp5 by Molmil](/molmil-images/mine/5hp5) | Srtucture of human peptidylarginine deiminase type I (PAD1) | 分子名称: | CALCIUM ION, Protein-arginine deiminase type-1 | 著者 | Unno, M, Nagai, A, Saijo, S, Shimizu, N, Kinjo, S, Mashimo, R, Kizawa, K, Takahara, H. | 登録日 | 2016-01-20 | 公開日 | 2016-07-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3.198 Å) | 主引用文献 | Monomeric Form of Peptidylarginine Deiminase Type I Revealed by X-ray Crystallography and Small-Angle X-ray Scattering J.Mol.Biol., 428, 2016
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7YRK
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![BU of 7yrk by Molmil](/molmil-images/mine/7yrk) | Crystal structure of the hen egg lysozyme-2-oxidobenzylidene-threoninato-copper (II) complex | 分子名称: | (6~{S})-6-[(1~{R})-1-oxidanylethyl]-2,4-dioxa-7$l^{4}-aza-3$l^{3}-cupratricyclo[7.4.0.0^{3,7}]trideca-1(13),7,9,11-tetraen-5-one, 1,2-ETHANEDIOL, CHLORIDE ION, ... | 著者 | Unno, M, Furuya, T, Kitanishi, K, Akitsu, T. | 登録日 | 2022-08-10 | 公開日 | 2023-05-10 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (0.92 Å) | 主引用文献 | A novel hybrid protein composed of superoxide-dismutase-active Cu(II) complex and lysozyme. Sci Rep, 13, 2023
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1WZF
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![BU of 1wzf by Molmil](/molmil-images/mine/1wzf) | Crystal Structure Of An Artificial Metalloprotein: Fe(10-COOH-Salophen)/Wild Type Heme oxygenase | 分子名称: | GLYCEROL, Heme oxygenase, SULFATE ION, ... | 著者 | Unno, M, Yokoi, N, Ueno, T, Watanabe, Y, Ikeda-Saito, M. | 登録日 | 2005-03-04 | 公開日 | 2006-02-21 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Design of metal cofactors activated by a protein-protein electron transfer system. Proc.Natl.Acad.Sci.Usa, 103, 2006
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1WNX
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![BU of 1wnx by Molmil](/molmil-images/mine/1wnx) | D136E mutant of Heme Oxygenase from Corynebacterium diphtheriae (HmuO) | 分子名称: | Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ... | 著者 | Unno, M, Matsui, T, Ikeda-Saito, M. | 登録日 | 2004-08-10 | 公開日 | 2004-11-09 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Roles of Distal Asp in Heme Oxygenase from Corynebacterium diphtheriae, HmuO: A WATER-DRIVEN OXYGEN ACTIVATION MECHANISM J.Biol.Chem., 280, 2005
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1WZD
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![BU of 1wzd by Molmil](/molmil-images/mine/1wzd) | Crystal Structure Of An Artificial Metalloprotein: Fe(10-CH2CH2COOH-Salophen)/Wild Type Heme oxygenase | 分子名称: | GLYCEROL, Heme oxygenase, SULFATE ION, ... | 著者 | Unno, M, Yokoi, N, Ueno, T, Watanabe, Y, Ikeda-Saito, M. | 登録日 | 2005-03-04 | 公開日 | 2006-02-21 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | 主引用文献 | Design of metal cofactors activated by a protein-protein electron transfer system. Proc.Natl.Acad.Sci.Usa, 103, 2006
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1WZG
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![BU of 1wzg by Molmil](/molmil-images/mine/1wzg) | Crystal Structure Of An Artificial Metalloprotein: Fe(Salophen)/Wild Type Heme oxygenase | 分子名称: | 2,2'-[1,2-PHENYLENEBIS(NITRILOMETHYLIDYNE)]BIS[PHENOLATO]](2-)-N,N',O,O']-IRON, GLYCEROL, Heme oxygenase, ... | 著者 | Unno, M, Yokoi, N, Ueno, T, Watanabe, Y, Ikeda-Saito, M. | 登録日 | 2005-03-04 | 公開日 | 2006-02-21 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Design of metal cofactors activated by a protein-protein electron transfer system. Proc.Natl.Acad.Sci.Usa, 103, 2006
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1WNW
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![BU of 1wnw by Molmil](/molmil-images/mine/1wnw) | D136N mutant of Heme Oxygenase from Corynebacterium diphtheriae (HmuO) | 分子名称: | Heme oxygenase, IODIDE ION, PROTOPORPHYRIN IX CONTAINING FE, ... | 著者 | Unno, M, Matsui, T, Ikeda-Saito, M. | 登録日 | 2004-08-10 | 公開日 | 2004-11-09 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Roles of Distal Asp in Heme Oxygenase from Corynebacterium diphtheriae, HmuO: A WATER-DRIVEN OXYGEN ACTIVATION MECHANISM J.Biol.Chem., 280, 2005
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7D4Y
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![BU of 7d4y by Molmil](/molmil-images/mine/7d4y) | |
3MOO
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![BU of 3moo by Molmil](/molmil-images/mine/3moo) | Crystal structure of the HmuO, heme oxygenase from Corynebacterium diphtheriae, in complex with azide-bound verdoheme | 分子名称: | 5-OXA-PROTOPORPHYRIN IX CONTAINING FE, AZIDE ION, Heme oxygenase, ... | 著者 | Omori, K, Matsui, T, Unno, M, Ikeda-Saito, M. | 登録日 | 2010-04-22 | 公開日 | 2011-03-09 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.71 Å) | 主引用文献 | Enzymatic ring-opening mechanism of verdoheme by the heme oxygenase: a combined X-ray crystallography and QM/MM study. J.Am.Chem.Soc., 132, 2010
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4WGZ
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![BU of 4wgz by Molmil](/molmil-images/mine/4wgz) | |
4WGY
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![BU of 4wgy by Molmil](/molmil-images/mine/4wgy) | |
1IW1
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![BU of 1iw1 by Molmil](/molmil-images/mine/1iw1) | Crystal structure of a heme oxygenase (HmuO) from Corynebacterium diphtheriae complexed with heme in the ferrous state | 分子名称: | Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ... | 著者 | Hirotsu, S, Unno, M, Chu, G.C, Lee, D.S, Park, S.Y, Shiro, Y, Ikeda-Saito, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2002-04-04 | 公開日 | 2003-04-04 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | The crystal structures of the ferric and ferrous forms of the heme complex of HmuO, a heme oxygenase of Corynebacterium diphtheriae. J.Biol.Chem., 279, 2004
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1IW0
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![BU of 1iw0 by Molmil](/molmil-images/mine/1iw0) | Crystal structure of a heme oxygenase (HmuO) from Corynebacterium diphtheriae complexed with heme in the ferric state | 分子名称: | Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ... | 著者 | Hirotsu, S, Unno, M, Chu, G.C, Lee, D.S, Park, S.Y, Shiro, Y, Ikeda-Saito, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2002-04-04 | 公開日 | 2003-04-08 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | 主引用文献 | The crystal structures of the ferric and ferrous forms of the heme complex of HmuO, a heme oxygenase of Corynebacterium diphtheriae. J.Biol.Chem., 279, 2004
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6L93
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5B4J
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![BU of 5b4j by Molmil](/molmil-images/mine/5b4j) | Crystal structure of I86D mutant of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin (data 3) | 分子名称: | BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase | 著者 | Hagiwara, Y, Wada, K, Irikawa, T, Unno, M, Fukuyama, K, Sugishima, M. | 登録日 | 2016-04-04 | 公開日 | 2017-03-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.05 Å) | 主引用文献 | Atomic-resolution structure of the phycocyanobilin:ferredoxin oxidoreductase I86D mutant in complex with fully protonated biliverdin FEBS Lett., 590, 2016
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5B4H
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![BU of 5b4h by Molmil](/molmil-images/mine/5b4h) | Crystal structure of I86D mutant of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin (data 1) | 分子名称: | BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase | 著者 | Hagiwara, Y, Wada, K, Irikawa, T, Unno, M, Fukuyama, K, Sugishima, M. | 登録日 | 2016-04-04 | 公開日 | 2017-03-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.11 Å) | 主引用文献 | Atomic-resolution structure of the phycocyanobilin:ferredoxin oxidoreductase I86D mutant in complex with fully protonated biliverdin FEBS Lett., 590, 2016
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5B4I
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![BU of 5b4i by Molmil](/molmil-images/mine/5b4i) | Crystal structure of I86D mutant of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin (data 2) | 分子名称: | BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase | 著者 | Hagiwara, Y, Wada, K, Irikawa, T, Unno, M, Fukuyama, K, Sugishima, M. | 登録日 | 2016-04-04 | 公開日 | 2017-03-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.11 Å) | 主引用文献 | Atomic-resolution structure of the phycocyanobilin:ferredoxin oxidoreductase I86D mutant in complex with fully protonated biliverdin FEBS Lett., 590, 2016
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1WNV
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![BU of 1wnv by Molmil](/molmil-images/mine/1wnv) | D136A mutant of Heme Oxygenase from Corynebacterium diphtheriae (HmuO) | 分子名称: | Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION | 著者 | Matsui, T, Unno, M, Ikeda-Saito, M. | 登録日 | 2004-08-10 | 公開日 | 2004-11-09 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Roles of Distal Asp in Heme Oxygenase from Corynebacterium diphtheriae, HmuO: A WATER-DRIVEN OXYGEN ACTIVATION MECHANISM J.Biol.Chem., 280, 2005
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5ZNN
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3I9T
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![BU of 3i9t by Molmil](/molmil-images/mine/3i9t) | Crystal structure of the rat heme oxygenase (HO-1) in complex with heme binding dithiothreitol (DTT) | 分子名称: | (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Matsui, T, Unno, M, Ikeda-Saito, M. | 登録日 | 2009-07-13 | 公開日 | 2010-05-19 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | 主引用文献 | Dioxygen activation for the self-degradation of heme: reaction mechanism and regulation of heme oxygenase. Inorg.Chem., 49, 2010
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3I9U
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![BU of 3i9u by Molmil](/molmil-images/mine/3i9u) | Crystal structure of the rat heme oxygenase (HO-1) in complex with heme binding dithioerythritol (DTE) | 分子名称: | (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Matsui, T, Unno, M, Ikeda-Saito, M. | 登録日 | 2009-07-13 | 公開日 | 2010-05-19 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.25 Å) | 主引用文献 | Dioxygen activation for the self-degradation of heme: reaction mechanism and regulation of heme oxygenase. Inorg.Chem., 49, 2010
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3I8R
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![BU of 3i8r by Molmil](/molmil-images/mine/3i8r) | Crystal structure of the heme oxygenase from Corynebacterium diphtheriae (HmuO) in complex with heme binding ditiothreitol (DTT) | 分子名称: | (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, ... | 著者 | Matsui, T, Unno, M, Ikeda-Saito, M. | 登録日 | 2009-07-10 | 公開日 | 2010-05-19 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Dioxygen activation for the self-degradation of heme: reaction mechanism and regulation of heme oxygenase. Inorg.Chem., 49, 2010
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