6H3H
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![BU of 6h3h by Molmil](/molmil-images/mine/6h3h) | Fab fragment of antibody against fullerene C60 | 分子名称: | Anti-fullerene antibody Fab fragment Heavy chain, Anti-fullerene antibody Fab fragment Light chain, GLYCEROL, ... | 著者 | Osipov, E.M, Tikhonova, T.V. | 登録日 | 2018-07-18 | 公開日 | 2019-05-15 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (1.92 Å) | 主引用文献 | Structure of the Anti-C60 Fullerene Antibody Fab Fragment: Structural Determinants of Fullerene Binding. Acta Naturae, 11, 2019
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4L3Z
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![BU of 4l3z by Molmil](/molmil-images/mine/4l3z) | Nitrite complex of TvNiR, second middle dose data set | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Eight-heme nitrite reductase, ... | 著者 | Trofimov, A.A, Polyakov, K.M, Lazarenko, V.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O. | 登録日 | 2013-06-07 | 公開日 | 2014-06-11 | 最終更新日 | 2017-11-15 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Investigation of the X-ray-induced nitrite reduction catalysed by cytochrome c nitrite reductase from the bacterium Thioalkalivibrio nitratireducens To be Published
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4L38
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![BU of 4l38 by Molmil](/molmil-images/mine/4l38) | Nitrite complex of TvNiR, low dose data set | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Eight-heme nitrite reductase, ... | 著者 | Trofimov, A.A, Polyakov, K.M, Lazarenko, V.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O. | 登録日 | 2013-06-05 | 公開日 | 2014-07-16 | 最終更新日 | 2017-11-15 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Investigation of the X-ray-induced nitrite reduction catalysed by cytochrome c nitrite reductase from the bacterium Thioalkalivibrio nitratireducens To be Published
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4L3Y
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![BU of 4l3y by Molmil](/molmil-images/mine/4l3y) | Nitrite complex of TvNiR, high dose data set (NO complex) | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Eight-heme nitrite reductase, ... | 著者 | Trofimov, A.A, Polyakov, K.M, Lazarenko, V.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O. | 登録日 | 2013-06-07 | 公開日 | 2014-06-11 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Investigation of the X-ray-induced nitrite reduction catalysed by cytochrome c nitrite reductase from the bacterium Thioalkalivibrio nitratireducens To be Published
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4L3X
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![BU of 4l3x by Molmil](/molmil-images/mine/4l3x) | Nitrite complex of TvNiR, first middle dose data set | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Eight-heme nitrite reductase, ... | 著者 | Trofimov, A.A, Polyakov, K.M, Lazarenko, V.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O. | 登録日 | 2013-06-07 | 公開日 | 2014-06-11 | 最終更新日 | 2017-11-15 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Investigation of the X-ray-induced nitrite reduction catalysed by cytochrome c nitrite reductase from the bacterium Thioalkalivibrio nitratireducens To be Published
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3FN4
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![BU of 3fn4 by Molmil](/molmil-images/mine/3fn4) | Apo-form of NAD-dependent formate dehydrogenase from bacterium Moraxella sp.C-1 in closed conformation | 分子名称: | GLYCEROL, NAD-dependent formate dehydrogenase, SULFATE ION | 著者 | Shabalin, I.G, Polyakov, K.M, Filippova, E.V, Dorovatovskiy, P.V, Tikhonova, T.V, Sadykhov, E.G, Tishkov, V.I, Popov, V.O. | 登録日 | 2008-12-23 | 公開日 | 2009-12-01 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (1.96 Å) | 主引用文献 | Structures of the apo and holo forms of formate dehydrogenase from the bacterium Moraxella sp. C-1: towards understanding the mechanism of the closure of the interdomain cleft Acta Crystallogr.,Sect.D, 65, 2009
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3GM6
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![BU of 3gm6 by Molmil](/molmil-images/mine/3gm6) | Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with phosphate | 分子名称: | (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ... | 著者 | Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Filimonenkov, A.A, Dorovatovsky, P.V, Tikhonova, T.V, Popov, V.O. | 登録日 | 2009-03-13 | 公開日 | 2009-08-04 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structure of octaheme cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens in a complex with phosphate Crystallography Reports, 55, 2010
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3F29
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![BU of 3f29 by Molmil](/molmil-images/mine/3f29) | Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with sulfite | 分子名称: | 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, CALCIUM ION, Eight-heme nitrite reductase, ... | 著者 | Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Slutsky, A, Tikhonova, T.V, Antipov, A.N, Zvyagilskaya, R.A, Popov, A.N, Lamzin, V.S, Bourenkov, G.P, Popov, V.O. | 登録日 | 2008-10-29 | 公開日 | 2008-12-09 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Binding of sulfite by the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase To be Published
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3FO3
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![BU of 3fo3 by Molmil](/molmil-images/mine/3fo3) | Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase reduced by sodium dithionite (sulfite complex) | 分子名称: | 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, ... | 著者 | Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Slutsky, A, Tikhonova, T.V, Antipov, A.N, Zvyagilskaya, R.A, Popov, A.N, Lamzin, V.S, Bourenkov, G.P, Popov, V.O. | 登録日 | 2008-12-27 | 公開日 | 2009-12-29 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | 主引用文献 | Structures of complexes of octahaem cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens with sulfite and cyanide Acta Crystallogr.,Sect.D, 66, 2010
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3LGQ
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![BU of 3lgq by Molmil](/molmil-images/mine/3lgq) | Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with sulfite (modified Tyr-303) | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ... | 著者 | Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Filimonenkov, A.A, Tikhonova, T.V, Lamzin, V.S, Bourenkov, G.P, Popov, V.O. | 登録日 | 2010-01-21 | 公開日 | 2011-02-16 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Covalent modifications of the catalytic tyrosine in octahaem cytochrome c nitrite reductase and their effect on the enzyme activity. Acta Crystallogr.,Sect.D, 68, 2012
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3LG1
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![BU of 3lg1 by Molmil](/molmil-images/mine/3lg1) | Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase reduced by sodium borohydride (in complex with sulfite) | 分子名称: | 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, CALCIUM ION, Eight-heme nitrite reductase, ... | 著者 | Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Filimonenkov, A.A, Dorovatovsky, P.V, Tikhonova, T.V, Popov, V.O. | 登録日 | 2010-01-19 | 公開日 | 2010-12-29 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Covalent modifications of the catalytic tyrosine in octahaem cytochrome c nitrite reductase and their effect on the enzyme activity. Acta Crystallogr.,Sect.D, 68, 2012
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3MMO
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![BU of 3mmo by Molmil](/molmil-images/mine/3mmo) | Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with cyanide | 分子名称: | 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ... | 著者 | Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Tikhonova, T.V, Lamzin, V.S, Bourenkov, G.P, Popov, V.O. | 登録日 | 2010-04-20 | 公開日 | 2010-09-29 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | Structures of complexes of octahaem cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens with sulfite and cyanide. Acta Crystallogr.,Sect.D, 66, 2010
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3SCE
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![BU of 3sce by Molmil](/molmil-images/mine/3sce) | Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase with a covalent bond between the CE1 atom of Tyr303 and the CG atom of Gln360 (TvNiRb) | 分子名称: | 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, CALCIUM ION, Eight-heme nitrite reductase, ... | 著者 | Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2011-06-07 | 公開日 | 2011-07-06 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | Covalent modifications of the catalytic tyrosine in octahaem cytochrome c nitrite reductase and their effect on the enzyme activity. Acta Crystallogr.,Sect.D, 68, 2012
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3UU9
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![BU of 3uu9 by Molmil](/molmil-images/mine/3uu9) | Structure of the free TvNiRb form of Thioalkalivibrio nitratireducens cytochrome c nitrite reductase | 分子名称: | CALCIUM ION, Eight-heme nitrite reductase, HEME C, ... | 著者 | Trofimov, A.A, Polyakov, K.M, Tikhonova, T.V, Tikhonov, A.V, Dorovatovskii, P.V, Popov, V.O. | 登録日 | 2011-11-28 | 公開日 | 2012-01-25 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Covalent modifications of the catalytic tyrosine in octahaem cytochrome c nitrite reductase and their effect on the enzyme activity. Acta Crystallogr.,Sect.D, 68, 2012
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3S7W
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![BU of 3s7w by Molmil](/molmil-images/mine/3s7w) | Structure of the TvNiRb form of Thioalkalivibrio nitratireducens cytochrome c nitrite reductase with an oxidized Gln360 in a complex with hydroxylamine | 分子名称: | AZIDE ION, CALCIUM ION, Eight-heme nitrite reductase, ... | 著者 | Trofimov, A.A, Polyakov, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2011-05-27 | 公開日 | 2011-07-27 | 最終更新日 | 2023-09-13 | 実験手法 | X-RAY DIFFRACTION (1.79 Å) | 主引用文献 | Structure of the TvNiRb form of Thioalkalivibrio nitratireducens cytochrome c nitrite reductase with an oxidized Gln360 in a complex with hydroxylamine To be Published
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8YU5
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![BU of 8yu5 by Molmil](/molmil-images/mine/8yu5) | The structure of non-activated thiocyanate dehydrogenase mutant with the H447Q substitution from Pelomicrobium methylotrophicum (pmTcDH H447Q) | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, COPPER (II) ION, ... | 著者 | Varfolomeeva, L.A, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-03-26 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | The structure of non-activated thiocyanate dehydrogenase mutant with the H447Q substitution from Pelomicrobium methylotrophicum (pmTcDH H447Q) To Be Published
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8Z77
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![BU of 8z77 by Molmil](/molmil-images/mine/8z77) | The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2 and Na ascorbate during 12 hours | 分子名称: | 1,2-ETHANEDIOL, COPPER (II) ION, Twin-arginine translocation signal domain-containing protein | 著者 | Varfolomeeva, L.A, Solovieva, A.Y, Shipkov, N.S, Dergousova, N.I, Minyaev, M.E, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-04-19 | 公開日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2 and Na ascorbate during 12 hours To Be Published
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8Z75
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![BU of 8z75 by Molmil](/molmil-images/mine/8z75) | The structure of non-activated thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH) | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, COPPER (II) ION, ... | 著者 | Varfolomeeva, L.A, Solovieva, A.Y, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-04-19 | 公開日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | The structure of non-activated thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH) To Be Published
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8Z76
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![BU of 8z76 by Molmil](/molmil-images/mine/8z76) | The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2 during 6 months | 分子名称: | 1,2-ETHANEDIOL, COPPER (II) ION, SODIUM ION, ... | 著者 | Varfolomeeva, L.A, Solovieva, A.Y, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-04-19 | 公開日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum (pmTcDH), activated by crystals soaking with 1 mM CuCl2 To Be Published
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8YTR
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![BU of 8ytr by Molmil](/molmil-images/mine/8ytr) | The structure of Cu(II)-CopC from Thioalkalivibrio paradoxus | 分子名称: | COPPER (II) ION, CopC domain-containing protein, DI(HYDROXYETHYL)ETHER | 著者 | Kulikova, O.G, Solovieva, A.Y, Varfolomeeva, L.A, Dergousova, N.I, Nikolaeva, A.Y, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-03-26 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | The structure of Cu(II)-CopC from Thioalkalivibrio paradoxus To Be Published
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8YTS
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![BU of 8yts by Molmil](/molmil-images/mine/8yts) | The structure of the cytochrome c546/556 from Thioalkalivibrio paradoxus with unusual UV-Vis spectral features at atomic resolution | 分子名称: | Cytochrome C, HEME C | 著者 | Varfolomeeva, L.A, Solovieva, A.Y, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-03-26 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (1.15 Å) | 主引用文献 | The structure of the cytochrome c546/556 from Thioalkalivibrio paradoxus with unusual UV-Vis spectral features at atomic resolution To Be Published
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8YU6
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![BU of 8yu6 by Molmil](/molmil-images/mine/8yu6) | The structure of thiocyanate dehydrogenase mutant with the H447Q substitution from Pelomicrobium methylotrophicum (pmTcDH H447Q), activated by crystal soaking with 1mM CuCl2 and 1 mM sodium ascorbate | 分子名称: | 1,2-ETHANEDIOL, CHLORIDE ION, COPPER (II) ION, ... | 著者 | Varfolomeeva, L.A, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-03-26 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | The structure of thiocyanate dehydrogenase mutant with the H447Q substitution from Pelomicrobium methylotrophicum (pmTcDH H447Q), activated by crystal soaking with 1mM CuCl2 and 1 mM sodium ascorbate To Be Published
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8YOU
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![BU of 8you by Molmil](/molmil-images/mine/8you) | The pmTcDH complex structure with an inhibitor SeCN | 分子名称: | COPPER (II) ION, GLYCEROL, SELENIUM ATOM, ... | 著者 | Varfolomeeva, L.A, Polyakov, K.M, Shipkov, N.S, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-03-13 | 公開日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | The pmTcDH complex structure with an inhibitor SeCN To Be Published
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8YTQ
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![BU of 8ytq by Molmil](/molmil-images/mine/8ytq) | The structure of apoCopC from Thioalkalivibrio paradoxus | 分子名称: | ACETATE ION, COPPER (II) ION, CopC domain-containing protein, ... | 著者 | Kulikova, O.G, Solovieva, A.Y, Varfolomeeva, L.A, Dergousova, N.I, Boyko, K.M, Tikhonova, T.V, Popov, V.O. | 登録日 | 2024-03-26 | 公開日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | The structure of apoCopC from Thioalkalivibrio paradoxus To Be Published
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4Q17
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![BU of 4q17 by Molmil](/molmil-images/mine/4q17) | Free form of TvNiR, middle dose data set | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CITRIC ACID, ... | 著者 | Lazarenko, V.A, Polyakov, K.M, Trofimov, A.A, Popov, A.N, Tikhonova, T.V, Tikhonov, A.V, Popov, V.O. | 登録日 | 2014-04-03 | 公開日 | 2014-09-10 | 最終更新日 | 2017-11-22 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | X-ray-induced changes in the active site structure of octaheme cytochrome c nitrite reductase and its substrate complexes To be published
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