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4IYO
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BU of 4iyo by Molmil
Crystal structure of cystathionine gamma lyase from Xanthomonas oryzae pv. oryzae (XometC) in complex with E-site serine, A-site serine, A-site external aldimine structure with aminoacrylate and A-site iminopropionate intermediates
分子名称: 2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid, AMINO-ACRYLATE, Cystathionine gamma-lyase-like protein, ...
著者Ngo, H.P.T, Kim, J.K, Kang, L.W.
登録日2013-01-29
公開日2014-01-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献PLP undergoes conformational changes during the course of an enzymatic reaction.
Acta Crystallogr.,Sect.D, 70, 2014
4IXS
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BU of 4ixs by Molmil
Native structure of xometc at ph 5.2
分子名称: CARBONATE ION, Cystathionine gamma-lyase-like protein, GLYCEROL
著者Ngo, H.P.T, Kim, J.K, Kang, L.W.
登録日2013-01-28
公開日2014-01-29
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献PLP undergoes conformational changes during the course of an enzymatic reaction.
Acta Crystallogr.,Sect.D, 70, 2014
4ZQI
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BU of 4zqi by Molmil
Crystal structure of Apo D-alanine-D-alanine ligase(DDL) from Yersinia pestis
分子名称: D-alanine--D-alanine ligase, SODIUM ION
著者Tran, H.-T, Kang, L.-W, Hong, M.-K, Ngo, H.P.T, Huynh, K.H, Ahn, Y.J.
登録日2015-05-10
公開日2016-01-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
4NFX
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BU of 4nfx by Molmil
Structure and atypical hydrolysis mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
分子名称: Putative Nudix hydrolase ymfB
著者Hong, M.K, Kim, J.K, Kang, L.W.
登録日2013-11-01
公開日2014-05-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Divalent metal ion-based catalytic mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
Acta Crystallogr.,Sect.D, 70, 2014
4NFW
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BU of 4nfw by Molmil
Structure and atypical hydrolysis mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
分子名称: MANGANESE (II) ION, Putative Nudix hydrolase ymfB, SULFATE ION
著者Hong, M.K, Kim, J.K, Kang, L.W.
登録日2013-11-01
公開日2014-05-14
最終更新日2015-03-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Divalent metal ion-based catalytic mechanism of the Nudix hydrolase Orf153 (YmfB) from Escherichia coli
Acta Crystallogr.,Sect.D, 70, 2014
4L1K
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BU of 4l1k by Molmil
Crystal structure of D-alanine-D-alnine ligase from Xanthomonas oryzae pv. oryzae with AMPPNP
分子名称: D-alanine--D-alanine ligase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Doan, T.T.N, Kim, J.K, Kang, L.W.
登録日2013-06-03
公開日2014-02-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of d-alanine-d-alanine ligase from Xanthomonas oryzae pv. oryzae alone and in complex with nucleotides
Arch.Biochem.Biophys., 545C, 2014
4ME6
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BU of 4me6 by Molmil
Crystal structure of D-alanine-D-alanine ligase A from Xanthomonas oryzae pathovar oryzae with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine--D-alanine ligase, MAGNESIUM ION
著者Doan, T.T.N, Kim, J.K, Ahn, Y.J, Lee, B.M, Kang, L.W.
登録日2013-08-25
公開日2014-02-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of d-alanine-d-alanine ligase from Xanthomonas oryzae pv. oryzae alone and in complex with nucleotides
Arch.Biochem.Biophys., 545C, 2014
5C1P
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BU of 5c1p by Molmil
Crystal structure of ADP and D-alanyl-D-alanine complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, D-ALANINE, ...
著者Tran, H.T, Kang, L.W, Hong, M.K, Ngo, H.P.T.
登録日2015-06-15
公開日2016-03-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
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