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2BSG
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BU of 2bsg by Molmil
The modeled structure of fibritin (gpwac) of bacteriophage T4 based on cryo-EM reconstruction of the extended tail of bacteriophage T4
分子名称: FIBRITIN
著者Kostyuchenko, V.A, Chipman, P.R, Leiman, P.G, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2005-05-20
公開日2005-09-21
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献The Tail Structure of Bacteriophage T4 and its Mechanism of Contraction.
Nat.Struct.Mol.Biol., 12, 2005
7CN7
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BU of 7cn7 by Molmil
T4 phage spackle protein gp61.3 complex with lysozyme domain of gp5 tail lysozyme
分子名称: 1,2-ETHANEDIOL, 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Baseplate central spike complex protein gp5, ...
著者Kanamaru, S, Leiman, P.G.
登録日2020-07-30
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structure and Function of the T4 Spackle Protein Gp61.3.
Viruses, 12, 2020
7CN6
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BU of 7cn6 by Molmil
T4 phage spackle protein gp61.3
分子名称: CALCIUM ION, Protein spackle
著者Kanamaru, S, Leiman, P.G.
登録日2020-07-30
公開日2020-10-14
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure and Function of the T4 Spackle Protein Gp61.3.
Viruses, 12, 2020
5W5E
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BU of 5w5e by Molmil
Re-refinement of the pyocin tube structure
分子名称: FIIR2 protein
著者Wang, F, Zheng, W, Taylor, N.M, Guerrero-Ferreira, R.C, Leiman, P.G, Egelman, E.H.
登録日2017-06-15
公開日2017-08-16
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Refined Cryo-EM Structure of the T4 Tail Tube: Exploring the Lowest Dose Limit.
Structure, 25, 2017
5CES
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BU of 5ces by Molmil
C-terminal domain of the R-type pyocin baseplate protein PA0618
分子名称: PA0618
著者Plattner, M, Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2015-07-07
公開日2016-07-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
1IJG
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BU of 1ijg by Molmil
Structure of the Bacteriophage phi29 Head-Tail Connector Protein
分子名称: UPPER COLLAR PROTEIN
著者Simpson, A.A, Leiman, P.G, Tao, Y, He, Y, Badasso, M, Jardine, P.J, Anderson, D.L, Rossmann, M.G.
登録日2001-04-26
公開日2001-05-09
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure determination of the head-tail connector of bacteriophage phi29.
Acta Crystallogr.,Sect.D, 57, 2001
6HHK
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BU of 6hhk by Molmil
Structure of gp105 of Listeria bacteriophage A511
分子名称: CHLORIDE ION, Gp105
著者Taylor, N.M.I, Guerrero-Ferreira, R.C, Leiman, P.G.
登録日2018-08-28
公開日2019-01-23
最終更新日2019-02-13
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Structure and transformation of bacteriophage A511 baseplate and tail upon infection ofListeriacells.
EMBO J., 38, 2019
6HX0
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BU of 6hx0 by Molmil
Cell wall binding domain of endolysin from Listeria phage A500.
分子名称: L-alanyl-D-glutamate peptidase
著者Dunne, M, Taylor, N.M.I, Shen, Y, Loessner, M.J, Leiman, P.G.
登録日2018-10-15
公開日2019-10-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structural basis for recognition of bacterial cell wall teichoic acid by pseudo-symmetric SH3b-like repeats of a viral peptidoglycan hydrolase
Chem Sci, 2020
3WIT
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BU of 3wit by Molmil
Crystal structure of the C-terminal region of VgrG1 from E. coli O157 EDL933
分子名称: Putative Vgr protein
著者Uchida, K, Leiman, P.G, Arisaka, F, Kanamaru, S.
登録日2013-09-25
公開日2013-12-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure and properties of the C-terminal beta-helical domain of VgrG protein from Escherichia coli O157
J.Biochem., 155, 2014
1JNB
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BU of 1jnb by Molmil
CONNECTOR PROTEIN FROM BACTERIOPHAGE PHI29
分子名称: UPPER COLLAR PROTEIN
著者Simpson, A.A, Leiman, P.G, Tao, Y, He, Y, Badasso, M.O, Jardine, P.J, Anderson, D.L, Rossmann, M.G.
登録日2001-07-23
公開日2001-08-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure determination of the head-tail connector of bacteriophage phi29.
Acta Crystallogr.,Sect.D, 57, 2001
4Y9V
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BU of 4y9v by Molmil
Gp54 tailspike of Acinetobacter baumannii bacteriophage AP22 in complex with A. baumannii capsular saccharide
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2,4-dideoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-alpha-D-fucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-mannopyranuronic acid, CHLORIDE ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2015-02-17
公開日2017-02-01
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Structure of Acinetobacter baumannii bacteriophage AP22 polysaccharide degrading lyase in complex with A. baumannii capsular saccharide at 0.9 A resolution
TO BE PUBLISHED
1PDL
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BU of 1pdl by Molmil
Fitting of gp5 in the cryoEM reconstruction of the bacteriophage T4 baseplate
分子名称: Tail-associated lysozyme
著者Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2003-05-19
公開日2003-09-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
1PDJ
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BU of 1pdj by Molmil
Fitting of gp27 into cryoEM reconstruction of bacteriophage T4 baseplate
分子名称: Baseplate structural protein Gp27
著者Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2003-05-19
公開日2003-09-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
1PDF
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BU of 1pdf by Molmil
Fitting of gp11 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 baseplate-tail tube complex
分子名称: Baseplate structural protein Gp11
著者Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2003-05-19
公開日2003-09-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Three-dimensional structure of bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
1PDM
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BU of 1pdm by Molmil
Fitting of gp8 structure into the cryoEM reconstruction of the bacteriophage T4 baseplate
分子名称: Baseplate structural protein Gp8
著者Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2003-05-19
公開日2003-09-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
5IV5
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BU of 5iv5 by Molmil
Cryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex
分子名称: Baseplate hub protein gp27, Baseplate tail-tube protein gp48, Baseplate tail-tube protein gp54, ...
著者Taylor, N.M.I, Guerrero-Ferreira, R.C, Goldie, K.N, Stahlberg, H, Leiman, P.G.
登録日2016-03-19
公開日2016-05-18
最終更新日2018-02-07
実験手法ELECTRON MICROSCOPY (4.11 Å)
主引用文献Structure of the T4 baseplate and its function in triggering sheath contraction.
Nature, 533, 2016
5IV7
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BU of 5iv7 by Molmil
Cryo-electron microscopy structure of the star-shaped, hubless post-attachment T4 baseplate
分子名称: Baseplate wedge protein gp10, Baseplate wedge protein gp11, Baseplate wedge protein gp25, ...
著者Taylor, N.M.I, Guerrero-Ferreira, R.C, Goldie, K.N, Stahlberg, H, Leiman, P.G.
登録日2016-03-19
公開日2016-05-18
最終更新日2018-02-07
実験手法ELECTRON MICROSCOPY (6.77 Å)
主引用文献Structure of the T4 baseplate and its function in triggering sheath contraction.
Nature, 533, 2016
3PQI
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BU of 3pqi by Molmil
Crystal structure of the bacteriophage phi92 membrane-piercing protein gp138
分子名称: FE (III) ION, POTASSIUM ION, gene product 138
著者Browning, C, Shneider, M, Leiman, P.G.
登録日2010-11-26
公開日2012-02-22
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.642 Å)
主引用文献Phage pierces the host cell membrane with the iron-loaded spike.
Structure, 20, 2012
3PQH
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BU of 3pqh by Molmil
Crystal structure of the C-terminal fragment of the bacteriophage phi92 membrane-piercing protein gp138
分子名称: FE (III) ION, SODIUM ION, gene product 138
著者Browning, C, Shneider, M, Leiman, P.G.
登録日2010-11-26
公開日2012-02-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.295 Å)
主引用文献Phage pierces the host cell membrane with the iron-loaded spike.
Structure, 20, 2012
4MTK
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BU of 4mtk by Molmil
Crystal structure of PA0091 VgrG1, the central spike of the Type VI Secretion System
分子名称: SULFATE ION, TRIS(HYDROXYETHYL)AMINOMETHANE, VgrG1
著者Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2013-09-19
公開日2014-10-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.322 Å)
主引用文献The conserved architecture of the T6SS central spike complex
To be Published
4MTM
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BU of 4mtm by Molmil
Crystal structure of the tail fiber gp53 from Acinetobacter baumannii bacteriophage AP22
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, GLYCEROL, ...
著者Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2013-09-19
公開日2014-10-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.368 Å)
主引用文献Crystal Structure of the putative tail fiber protein gp53 from the Acinetobacter baumannii bacteriophage AP22
Biorxiv, 2019
4KU0
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BU of 4ku0 by Molmil
Enterobacteria phage T4 gp5.4 PAAR repeat protein in complex with T4 gp5 beta-helix fragment
分子名称: 1,2-ETHANEDIOL, 9-OCTADECENOIC ACID, FE (III) ION, ...
著者Buth, S.A, Leiman, P.G, Shneider, M.M.
登録日2013-05-21
公開日2014-05-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Crystall structute of the business end of the T4 cell-puncturing device
To be Published
1FOQ
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BU of 1foq by Molmil
PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA
分子名称: BACTERIOPHAGE PHI29 PROHEAD RNA
著者Simpson, A.A, Tao, Y, Leiman, P.G, Badasso, M.O, He, Y, Jardine, P.J, Olson, N.H, Morais, M.C, Grimes, S, Anderson, D.L, Baker, T.S, Rossmann, M.G.
登録日2000-08-28
公開日2000-12-22
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Structure of the bacteriophage phi29 DNA packaging motor.
Nature, 408, 2000
1FOU
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BU of 1fou by Molmil
CONNECTOR PROTEIN FROM BACTERIOPHAGE PHI29
分子名称: UPPER COLLAR PROTEIN
著者Simpson, A.A, Tao, Y, Leiman, P.G, Badasso, M.O, He, Y, Jardine, P.J, Olson, N.H, Morais, M.C, Grimes, S.N, Anderson, D.L, Baker, T.S, Rossmann, M.G.
登録日2000-08-28
公開日2000-12-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of the bacteriophage phi29 DNA packaging motor.
Nature, 408, 2000
5W5F
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BU of 5w5f by Molmil
Cryo-EM structure of the T4 tail tube
分子名称: Tail tube protein gp19
著者Zheng, W, Wang, F, Taylor, N.M, Guerrero-Ferreira, R.C, Leiman, P.G, Egelman, E.H.
登録日2017-06-15
公開日2017-08-16
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Refined Cryo-EM Structure of the T4 Tail Tube: Exploring the Lowest Dose Limit.
Structure, 25, 2017

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