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6P1Z
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BU of 6p1z by Molmil
Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with the C-terminal part of the T4 gp5 beta-helical domain
分子名称: 9-OCTADECENOIC ACID, Baseplate central spike complex protein gp5, MAGNESIUM ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2019-05-20
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with the C-terminal part of the T4 gp5 beta-helical domain
To Be Published
1FOQ
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BU of 1foq by Molmil
PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA
分子名称: BACTERIOPHAGE PHI29 PROHEAD RNA
著者Simpson, A.A, Tao, Y, Leiman, P.G, Badasso, M.O, He, Y, Jardine, P.J, Olson, N.H, Morais, M.C, Grimes, S, Anderson, D.L, Baker, T.S, Rossmann, M.G.
登録日2000-08-28
公開日2000-12-22
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Structure of the bacteriophage phi29 DNA packaging motor.
Nature, 408, 2000
6P22
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BU of 6p22 by Molmil
Photorhabdus Virulence Cassette (PVC) PAAR repeat protein Pvc10 in complex with a T4 gp5 beta-helix fragment modified to mimic Pvc8, the central spike protein of PVC
分子名称: 9-OCTADECENOIC ACID, CHIMERA OF CENTRAL SPIKE PROTEINS GP5 FROM PHAGE T4 AND PVC8 FROM PVC, MAGNESIUM ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2019-05-20
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.291 Å)
主引用文献Photorhabdus Virulence Cassette (PVC) PAAR repeat protein Pvc10 in complex with a T4 gp5 beta-helix fragment modified to mimic Pvc8, the central spike protein of PVC
To Be Published
6P2A
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BU of 6p2a by Molmil
Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment
分子名称: 9-OCTADECENOIC ACID, CHIMERA OF BACTERIOPHAGE OBP GP146 AND A T4 GP5, FE (II) ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2019-05-21
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Chimera of bacteriophage OBP gp146 central spike protein and a T4 gp5 beta-helix fragment
To Be Published
6HHK
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BU of 6hhk by Molmil
Structure of gp105 of Listeria bacteriophage A511
分子名称: CHLORIDE ION, Gp105
著者Taylor, N.M.I, Guerrero-Ferreira, R.C, Leiman, P.G.
登録日2018-08-28
公開日2019-01-23
最終更新日2019-02-13
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Structure and transformation of bacteriophage A511 baseplate and tail upon infection ofListeriacells.
EMBO J., 38, 2019
6HX0
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BU of 6hx0 by Molmil
Cell wall binding domain of endolysin from Listeria phage A500.
分子名称: L-alanyl-D-glutamate peptidase
著者Dunne, M, Taylor, N.M.I, Shen, Y, Loessner, M.J, Leiman, P.G.
登録日2018-10-15
公開日2019-10-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structural basis for recognition of bacterial cell wall teichoic acid by pseudo-symmetric SH3b-like repeats of a viral peptidoglycan hydrolase
Chem Sci, 2020
3WIT
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BU of 3wit by Molmil
Crystal structure of the C-terminal region of VgrG1 from E. coli O157 EDL933
分子名称: Putative Vgr protein
著者Uchida, K, Leiman, P.G, Arisaka, F, Kanamaru, S.
登録日2013-09-25
公開日2013-12-18
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure and properties of the C-terminal beta-helical domain of VgrG protein from Escherichia coli O157
J.Biochem., 155, 2014
6U5J
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BU of 6u5j by Molmil
CryoEM Structure of Pyocin R2 - postcontracted - collar
分子名称: Collar PA0615, Sheath PA0622
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
4Y9V
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BU of 4y9v by Molmil
Gp54 tailspike of Acinetobacter baumannii bacteriophage AP22 in complex with A. baumannii capsular saccharide
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2,4-dideoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-alpha-D-fucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-mannopyranuronic acid, CHLORIDE ION, ...
著者Buth, S.A, Shneider, M.M, Leiman, P.G.
登録日2015-02-17
公開日2017-02-01
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Structure of Acinetobacter baumannii bacteriophage AP22 polysaccharide degrading lyase in complex with A. baumannii capsular saccharide at 0.9 A resolution
TO BE PUBLISHED
5IV5
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BU of 5iv5 by Molmil
Cryo-electron microscopy structure of the hexagonal pre-attachment T4 baseplate-tail tube complex
分子名称: Baseplate hub protein gp27, Baseplate tail-tube protein gp48, Baseplate tail-tube protein gp54, ...
著者Taylor, N.M.I, Guerrero-Ferreira, R.C, Goldie, K.N, Stahlberg, H, Leiman, P.G.
登録日2016-03-19
公開日2016-05-18
最終更新日2018-02-07
実験手法ELECTRON MICROSCOPY (4.11 Å)
主引用文献Structure of the T4 baseplate and its function in triggering sheath contraction.
Nature, 533, 2016
5W5E
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BU of 5w5e by Molmil
Re-refinement of the pyocin tube structure
分子名称: FIIR2 protein
著者Wang, F, Zheng, W, Taylor, N.M, Guerrero-Ferreira, R.C, Leiman, P.G, Egelman, E.H.
登録日2017-06-15
公開日2017-08-16
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Refined Cryo-EM Structure of the T4 Tail Tube: Exploring the Lowest Dose Limit.
Structure, 25, 2017
4GBF
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BU of 4gbf by Molmil
Crystal structure of the C-terminal domain of gp131 from bacteriophage phiKZ
分子名称: CHLORIDE ION, MAGNESIUM ION, PHIKZ131
著者Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2012-07-27
公開日2012-10-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.949 Å)
主引用文献Crystal structure and location of gp131 in the bacteriophage phiKZ virion.
Virology, 434, 2012
4GLY
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BU of 4gly by Molmil
Human urokinase-type plasminogen activator uPA in complex with the two-disulfide bridge peptide UK504
分子名称: BICYCLIC PEPTIDE INHIBITOR UK504, CHLORIDE ION, GLYCEROL, ...
著者Buth, S.A, Leiman, P.G, Chen, S, Heinis, C.
登録日2012-08-15
公開日2013-05-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.518 Å)
主引用文献Bicyclic Peptide Ligands Pulled out of Cysteine-Rich Peptide Libraries.
J.Am.Chem.Soc., 135, 2013
4HIZ
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BU of 4hiz by Molmil
Phage phi92 endosialidase
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Schwarzer, D, Browning, C, Leiman, P.G.
登録日2012-10-12
公開日2014-01-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Crystal Structure of Endosialidase from Phage phi92 that cleaves alpha2,8- and alpha2,9-linked polysialic acid
To be Published
6EU4
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BU of 6eu4 by Molmil
Structure of Acinetobacter phage vb_AbaP_AS12 gp42 tailspike
分子名称: Tail spike protein, ZINC ION
著者Taylor, N.M.I, Shneider, M.M, Leiman, P.G.
登録日2017-10-27
公開日2018-11-07
実験手法X-RAY DIFFRACTION (1.794 Å)
主引用文献Structure of Acinetobacter phage vb_AbaP_AS12 gp42 tailspike
To Be Published
1JNB
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BU of 1jnb by Molmil
CONNECTOR PROTEIN FROM BACTERIOPHAGE PHI29
分子名称: UPPER COLLAR PROTEIN
著者Simpson, A.A, Leiman, P.G, Tao, Y, He, Y, Badasso, M.O, Jardine, P.J, Anderson, D.L, Rossmann, M.G.
登録日2001-07-23
公開日2001-08-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure determination of the head-tail connector of bacteriophage phi29.
Acta Crystallogr.,Sect.D, 57, 2001
1YUE
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BU of 1yue by Molmil
Bacteriophage T4 capsid vertex protein gp24
分子名称: Head vertex protein Gp24
著者Fokine, A, Leiman, P.G, Shneider, M.M, Ahvazi, B, Boeshans, K.M, Steven, A.C, Black, L.W, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2005-02-14
公開日2005-04-26
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry.
Proc.Natl.Acad.Sci.Usa, 102, 2005
6PYT
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BU of 6pyt by Molmil
CryoEM Structure of Pyocin R2 - precontracted - trunk
分子名称: Pyocin sheath PA0622, Pyocin tube PA0623
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-07-30
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
4S36
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BU of 4s36 by Molmil
Crystal structure of the C-terminal domain of R2 pyocin membrane-piercing spike
分子名称: FE (III) ION, Phage baseplate protein
著者Browning, C.B, Leiman, P.G, Shneider, M.M.
登録日2015-01-26
公開日2016-01-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Crystal structure of the C-terminal domain of R2 pyocin membrane-piercing spike
To be Published
4RU3
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BU of 4ru3 by Molmil
Crystal structure of the cell puncturing protein Orf41 from Pseudomonas phage SN
分子名称: CALCIUM ION, FE (III) ION, GLYCEROL, ...
著者Browning, C, Shneider, M.M, Leiman, P.G.
登録日2014-11-18
公開日2015-11-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.172 Å)
主引用文献Crystal structure of the cell puncturing protein Orf41 from Pseudomonas phage SN
To be Published
4S37
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BU of 4s37 by Molmil
Crystal structure of R2 pyocin membrane-piercing spike
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Browning, C.B, Leiman, P.G, Shneider, M.M.
登録日2015-01-26
公開日2016-01-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of R2 pyocin membrane-piercing spike
To be Published
2BSG
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BU of 2bsg by Molmil
The modeled structure of fibritin (gpwac) of bacteriophage T4 based on cryo-EM reconstruction of the extended tail of bacteriophage T4
分子名称: FIBRITIN
著者Kostyuchenko, V.A, Chipman, P.R, Leiman, P.G, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2005-05-20
公開日2005-09-21
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献The Tail Structure of Bacteriophage T4 and its Mechanism of Contraction.
Nat.Struct.Mol.Biol., 12, 2005
3FO8
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BU of 3fo8 by Molmil
Crystal structure of the bacteriophage T4 tail sheath protein, protease resistant fragment gp18PR
分子名称: ACETATE ION, Tail sheath protein Gp18
著者Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2008-12-29
公開日2009-03-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009
3FOI
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BU of 3foi by Molmil
Fitting of gp18M crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 contracted tail
分子名称: Tail sheath protein Gp18
著者Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2008-12-30
公開日2009-03-10
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009
3FOA
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BU of 3foa by Molmil
Crystal structure of the bacteriophage T4 tail sheath protein, deletion mutant gp18M
分子名称: Tail sheath protein Gp18
著者Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2008-12-29
公開日2009-03-10
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009

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