Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4JF9
DownloadVisualize
BU of 4jf9 by Molmil
Crystal structure of the wild type red fluorescent protein lanRFP (Branchiostoma Lanceolatum)
分子名称: Red fluorescent protein blFP-R5
著者Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
登録日2013-02-28
公開日2013-09-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
4HVF
DownloadVisualize
BU of 4hvf by Molmil
Crystal structure of green fluorescent protein lanGFP(Branchiostoma Lanceolatum)
分子名称: GLYCEROL, Green fluorescent protein blFP-Y6
著者Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
登録日2012-11-06
公開日2013-09-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
3RN3
DownloadVisualize
BU of 3rn3 by Molmil
SEGMENTED ANISOTROPIC REFINEMENT OF BOVINE RIBONUCLEASE A BY THE APPLICATION OF THE RIGID-BODY TLS MODEL
分子名称: RIBONUCLEASE A, SULFATE ION
著者Howlin, B, Moss, D.S, Harris, G.W, Palmer, R.A.
登録日1991-10-30
公開日1991-10-31
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Segmented anisotropic refinement of bovine ribonuclease A by the application of the rigid-body TLS model.
Acta Crystallogr.,Sect.A, 45, 1989
3LVC
DownloadVisualize
BU of 3lvc by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). Colorless form.
分子名称: GLYCEROL, Green fluorescent protein
著者Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
登録日2010-02-19
公開日2010-03-09
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3LVD
DownloadVisualize
BU of 3lvd by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). UV-photoconverted green form.
分子名称: GLYCEROL, Green fluorescent protein
著者Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
登録日2010-02-19
公開日2010-03-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.751 Å)
主引用文献Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
7JKV
DownloadVisualize
BU of 7jkv by Molmil
Crystal Structure of SARS-CoV-2 main protease in complex with an inhibitor GRL-2420
分子名称: 3C-like proteinase, N-[(2S)-1-({(1S,2S)-1-(1,3-benzothiazol-2-yl)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-4-methoxy-1H-indole-2-carboxamide, PENTAETHYLENE GLYCOL
著者Bulut, H, Hattori, S.I, Das, D, Murayama, K, Mitsuya, H.
登録日2020-07-29
公開日2020-09-23
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献A small molecule compound with an indole moiety inhibits the main protease of SARS-CoV-2 and blocks virus replication.
Nat Commun, 12, 2021
3PZW
DownloadVisualize
BU of 3pzw by Molmil
Soybean lipoxygenase-1 - re-refinement
分子名称: 1,2-ETHANEDIOL, ACETATE ION, FE (II) ION, ...
著者Chruszcz, M, Minor, W.
登録日2010-12-14
公開日2011-01-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Determination of protein structures - a series of fortunate events.
Biophys.J., 95, 2008
3PIB
DownloadVisualize
BU of 3pib by Molmil
Crystal structure of red fluorescent protein eqFP578 crystallized at pH 5.5
分子名称: GLYCEROL, eqFP578 fluorescent protein
著者Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
登録日2010-11-05
公開日2011-05-25
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.154 Å)
主引用文献Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
3PJ7
DownloadVisualize
BU of 3pj7 by Molmil
Crystal structure of far-red fluorescent protein Katushka crystallized at pH 8.5
分子名称: Red fluorescent protein eqFP578
著者Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
登録日2010-11-08
公開日2011-05-25
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
3PJB
DownloadVisualize
BU of 3pjb by Molmil
Crystal structure of red fluorescent protein eqFP578 crystallized at pH 4.0
分子名称: GLYCEROL, Red fluorescent protein eqFP578
著者Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
登録日2010-11-09
公開日2011-05-25
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
3LVA
DownloadVisualize
BU of 3lva by Molmil
Crystal structure of colorless GFP-like protein from Aequorea coerulescens
分子名称: GLYCEROL, Green fluorescent protein, SULFATE ION
著者Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
登録日2010-02-19
公開日2010-03-09
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3PJ5
DownloadVisualize
BU of 3pj5 by Molmil
Crystal structure of far-red fluorescent protein Katushka crystallized at pH 5.0
分子名称: Red fluorescent protein eqFP578, SULFATE ION
著者Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
登録日2010-11-08
公開日2011-05-25
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.
Protein Sci., 20, 2011
4ZBL
DownloadVisualize
BU of 4zbl by Molmil
Phototoxic fluorescent protein mKillerOrange
分子名称: CITRIC ACID, GLYCEROL, KillerOrange
著者Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
登録日2015-04-14
公開日2015-12-23
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal Structure of Phototoxic Orange Fluorescent Proteins with a Tryptophan-Based Chromophore.
Plos One, 10, 2015
3LF3
DownloadVisualize
BU of 3lf3 by Molmil
Crystal Structure of Fast Fluorescent Timer Fast-FT
分子名称: Fast Fluorescent Timer Fast-FT
著者Pletnev, S, Dauter, Z.
登録日2010-01-15
公開日2010-03-09
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Understanding blue-to-red conversion in monomeric fluorescent timers and hydrolytic degradation of their chromophores
J.Am.Chem.Soc., 132, 2010
3LF4
DownloadVisualize
BU of 3lf4 by Molmil
Crystal Structure of Fluorescent Timer Precursor Blue102
分子名称: Fluorescent Timer Precursor Blue102
著者Pletnev, S, Dauter, Z.
登録日2010-01-15
公開日2010-03-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.808 Å)
主引用文献Understanding blue-to-red conversion in monomeric fluorescent timers and hydrolytic degradation of their chromophores
J.Am.Chem.Soc., 132, 2010
1VIJ
DownloadVisualize
BU of 1vij by Molmil
HIV-1 PROTEASE COMPLEXED WITH THE INHIBITOR HOE/BAY 793 HEXAGONAL FORM
分子名称: HIV-1 PROTEASE, N-(1-BENZYL-2,3-DIHYDROXY-4-{3-METHYL-2-[2-(2-METHYL-PROPANE-2-SULFONYLMETHYL)-3-NAPHTHALEN-1-YL-PROPIONYLAMINO]-BUTYRYLAMINO}-5-PHENYL-PENTYL)-3-METHYL-2-[2-(2-METHYL-PROPANE-2-SULFONYLMETHYL)-3-NAPHTHALEN-1-YL-PROPIONYLAMINO]-BUTYRAMIDE
著者Lange-Savage, G, Berchtold, H, Liesum, A, Hilgenfeld, R.
登録日1997-05-07
公開日1999-01-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of HOE/BAY 793 complexed to human immunodeficiency virus (HIV-1) protease in two different crystal forms--structure/function relationship and influence of crystal packing.
Eur.J.Biochem., 248, 1997
1VIK
DownloadVisualize
BU of 1vik by Molmil
HIV-1 PROTEASE COMPLEXED WITH THE INHIBITOR HOE/BAY 793 ORTHORHOMBIC FORM
分子名称: HIV-1 PROTEASE, N-(1-BENZYL-2,3-DIHYDROXY-4-{3-METHYL-2-[2-(2-METHYL-PROPANE-2-SULFONYLMETHYL)-3-NAPHTHALEN-1-YL-PROPIONYLAMINO]-BUTYRYLAMINO}-5-PHENYL-PENTYL)-3-METHYL-2-[2-(2-METHYL-PROPANE-2-SULFONYLMETHYL)-3-NAPHTHALEN-1-YL-PROPIONYLAMINO]-BUTYRAMIDE
著者Lange-Savage, G, Berchtold, H, Liesum, A, Hilgenfeld, R.
登録日1997-05-07
公開日1998-12-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of HOE/BAY 793 complexed to human immunodeficiency virus (HIV-1) protease in two different crystal forms--structure/function relationship and influence of crystal packing.
Eur.J.Biochem., 248, 1997
1BHC
DownloadVisualize
BU of 1bhc by Molmil
BOVINE PANCREATIC TRYPSIN INHIBITOR CRYSTALLIZED FROM THIOCYANATE
分子名称: BOVINE PANCREATIC TRYPSIN INHIBITOR, THIOCYANATE ION
著者Hamiaux, C, Prange, T.
登録日1998-06-05
公開日1998-09-16
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The decameric structure of bovine pancreatic trypsin inhibitor (BPTI) crystallized from thiocyanate at 2.7 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
1B0C
DownloadVisualize
BU of 1b0c by Molmil
EVIDENCE OF A COMMON DECAMER IN THREE CRYSTAL STRUCTURES OF BPTI, CRYSTALLIZED FROM THIOCYANATE, CHLORIDE OR SULFATE
分子名称: PROTEIN (PANCREATIC TRYPSIN INHIBITOR)
著者Hamiaux, C, Prange, T, Ries-Kautt, M, Ducruix, A, Lafont, S, Astier, J.P, Veesler, S.
登録日1998-11-06
公開日1998-11-11
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The BPTI decamer observed in acidic pH crystal forms pre-exists as a stable species in solution.
J.Mol.Biol., 297, 2000
1BZ5
DownloadVisualize
BU of 1bz5 by Molmil
EVIDENCE OF A COMMON DECAMER IN THREE CRYSTAL STRUCTURES OF BPTI, CRYSTALLIZE FROM THIOCYANATE, CHLORIDE OR SULFATE
分子名称: PANCREATIC TRYPSIN INHIBITOR, SULFATE ION
著者Hamiaux, C, Prange, T, Ries-Kautt, M, Ducruix, A, Lafont, S, Astier, J.P, Veesler, S.
登録日1998-11-05
公開日1998-11-11
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献The BPTI decamer observed in acidic pH crystal forms pre-exists as a stable species in solution.
J.Mol.Biol., 297, 2000
5WCK
DownloadVisualize
BU of 5wck by Molmil
Native FEZ-1 metallo-beta-lactamase from Legionella gormanii
分子名称: FEZ-1 protein, GLYCEROL, SULFATE ION, ...
著者Garcia-Saez, I, Mercuri, P.S, Kahn, R, Papamicael, C, Shabalin, I.G, Raczynska, J.E, Jaskolski, M, Minor, W, Frere, J.M, Galleni, M, Dideberg, O.
登録日2017-06-30
公開日2018-06-20
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Three-dimensional structure of FEZ-1, a monomeric subclass B3 metallo-beta-lactamase from Fluoribacter gormanii, in native form and in complex with D-captopril.
J. Mol. Biol., 325, 2003
5W90
DownloadVisualize
BU of 5w90 by Molmil
FEZ-1 metallo-beta-lactamase from Legionella gormanii modelled with unknown ligand
分子名称: FEZ-1 protein, GLYCEROL, SULFATE ION, ...
著者Garcia-Saez, I, Mercuri, P.S, Kahn, R, Shabalin, I.G, Raczynska, J.E, Jaskolski, M, Minor, W, Papamicael, C, Frere, J.M, Galleni, M, Dideberg, O.
登録日2017-06-22
公開日2018-06-20
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Three-dimensional structure of FEZ-1, a monomeric subclass B3 metallo-beta-lactamase from Fluoribacter gormanii, in native form and in complex with D-captopril.
J. Mol. Biol., 325, 2003
1RSM
DownloadVisualize
BU of 1rsm by Molmil
THE 2-ANGSTROMS RESOLUTION STRUCTURE OF A THERMOSTABLE RIBONUCLEASE A CHEMICALLY CROSS-LINKED BETWEEN LYSINE RESIDUES 7 AND 41
分子名称: DINITROPHENYLENE, RIBONUCLEASE A
著者Weber, P.C, Sheriff, S, Ohlendorf, D.H, Finzel, B.C, Salemme, F.R.
登録日1985-08-27
公開日1986-01-21
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The 2-A resolution structure of a thermostable ribonuclease A chemically cross-linked between lysine residues 7 and 41.
Proc.Natl.Acad.Sci.USA, 82, 1985
1G6X
DownloadVisualize
BU of 1g6x by Molmil
ULTRA HIGH RESOLUTION STRUCTURE OF BOVINE PANCREATIC TRYPSIN INHIBITOR (BPTI) MUTANT WITH ALTERED BINDING LOOP SEQUENCE
分子名称: 1,2-ETHANEDIOL, PANCREATIC TRYPSIN INHIBITOR, SULFATE ION
著者Addlagatta, A, Czapinska, H, Krzywda, S, Otlewski, J, Jaskolski, M.
登録日2000-11-08
公開日2001-05-09
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (0.86 Å)
主引用文献Ultrahigh-resolution structure of a BPTI mutant.
Acta Crystallogr.,Sect.D, 57, 2001
1NAP
DownloadVisualize
BU of 1nap by Molmil
THE CRYSTAL STRUCTURE OF RECOMBINANT HUMAN NEUTROPHIL-ACTIVATING PEPTIDE-2 (M6L) AT 1.9-ANGSTROMS RESOLUTION
分子名称: NEUTROPHIL ACTIVATING PEPTIDE-2
著者Malkowski, M.G, Edwards, B.F.P.
登録日1994-12-19
公開日1995-12-19
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structure of recombinant human neutrophil-activating peptide-2 (M6L) at 1.9-A resolution.
J.Biol.Chem., 270, 1995

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon