3VRY
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![BU of 3vry by Molmil](/molmil-images/mine/3vry) | Crystal structure of HCK complexed with a pyrrolo-pyrimidine inhibitor 4-Amino-5-(4-phenoxyphenyl)-7H-pyrrolo[2,3-d]pyrimidin-7-yl-cyclopentane | 分子名称: | 4-Amino-5-(4-phenoxyphenyl)-7H-pyrrolo[2,3-d]pyrimidin-7-yl-cyclopentane, CALCIUM ION, CHLORIDE ION, ... | 著者 | Kuratani, M, Tomabechi, Y, Niwa, H, Handa, N, Yokoyama, S. | 登録日 | 2012-04-21 | 公開日 | 2013-05-01 | 最終更新日 | 2023-12-06 | 実験手法 | X-RAY DIFFRACTION (2.481 Å) | 主引用文献 | A Pyrrolo-Pyrimidine Derivative Targets Human Primary AML Stem Cells in Vivo Sci Transl Med, 5, 2013
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2CYM
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![BU of 2cym by Molmil](/molmil-images/mine/2cym) | EFFECTS OF AMINO ACID SUBSTITUTION ON THREE-DIMENSIONAL STRUCTURE: AN X-RAY ANALYSIS OF CYTOCHROME C3 FROM DESULFOVIBRIO VULGARIS HILDENBOROUGH AT 2 ANGSTROMS RESOLUTION | 分子名称: | CYTOCHROME C3, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Morimoto, Y, Tani, T, Okumura, H, Higuchi, Y, Yasuoka, N. | 登録日 | 1993-09-29 | 公開日 | 1994-04-30 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Effects of amino acid substitution on three-dimensional structure: an X-ray analysis of cytochrome c3 from Desulfovibrio vulgaris Hildenborough at 2 A resolution. J.Biochem.(Tokyo), 110, 1991
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3QHE
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![BU of 3qhe by Molmil](/molmil-images/mine/3qhe) | Crystal structure of the complex between the armadillo repeat domain of adenomatous polyposis coli and the tyrosine-rich domain of Sam68 | 分子名称: | Adenomatous polyposis coli protein, KH domain-containing, RNA-binding, ... | 著者 | Morishita, E.C.J, Murayama, K, Kato-Murayama, M, Ishizuku-Katsura, Y, Tomabechi, Y, Terada, T, Handa, N, Shirouzu, M, Akiyama, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2011-01-25 | 公開日 | 2011-11-02 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal structures of the armadillo repeat domain of adenomatous polyposis coli and its complex with the tyrosine-rich domain of sam68 Structure, 19, 2011
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2D5M
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2D4R
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![BU of 2d4r by Molmil](/molmil-images/mine/2d4r) | Crystal structure of TTHA0849 from Thermus thermophilus HB8 | 分子名称: | SULFATE ION, hypothetical protein TTHA0849 | 著者 | Nakabayashi, M, Shibata, N, Kuramitsu, S, Higuchi, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2005-10-23 | 公開日 | 2005-12-13 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Structure of a conserved hypothetical protein, TTHA0849 from Thermus thermophilus HB8, at 2.4 A resolution: a putative member of the StAR-related lipid-transfer (START) domain superfamily. Acta Crystallogr.,Sect.F, 61, 2005
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2E4I
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![BU of 2e4i by Molmil](/molmil-images/mine/2e4i) | Human Telomeric DNA mixed-parallel/antiparallel quadruplex under Physiological Ionic Conditions Stabilized by Proper Incorporation of 8-Bromoguanosines | 分子名称: | DNA (5'-D(*DAP*(BGM)P*DGP*DGP*DTP*DTP*DAP*(BGM)P*DGP*DGP*DTP*DTP*DAP*(BGM)P*(BGM)P*DGP*DTP*DTP*DAP*(BGM)P*DGP*DG)-3') | 著者 | Matsugami, A, Xu, Y, Noguchi, Y, Sugiyama, H, Katahira, M. | 登録日 | 2006-12-11 | 公開日 | 2007-12-11 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Structure of a human telomeric DNA sequence stabilized by 8-bromoguanosine substitutions, as determined by NMR in a K+ solution Febs J., 274, 2007
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7WDR
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![BU of 7wdr by Molmil](/molmil-images/mine/7wdr) | Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | 4-nitrophenyl beta-D-glucopyranoside, Beta-glucosidase, SULFATE ION | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2022-11-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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7WDP
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![BU of 7wdp by Molmil](/molmil-images/mine/7wdp) | Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | Beta-glucosidase, SULFATE ION, alpha-D-glucopyranose, ... | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2022-11-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.39 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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7WDS
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![BU of 7wds by Molmil](/molmil-images/mine/7wds) | Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | Beta-glucosidase, SULFATE ION, beta-D-xylopyranose | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2022-11-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.68 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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7WDV
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![BU of 7wdv by Molmil](/molmil-images/mine/7wdv) | Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ... | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2022-11-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.812 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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4E9W
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![BU of 4e9w by Molmil](/molmil-images/mine/4e9w) | Multicopper Oxidase mgLAC (data2) | 分子名称: | CHLORIDE ION, COPPER (II) ION, Multicopper oxidase, ... | 著者 | Komori, H, Miyazaki, K, Higuchi, Y. | 登録日 | 2012-03-21 | 公開日 | 2013-03-27 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | New insights into the catalytic active-site structure of multicopper oxidases. Acta Crystallogr.,Sect.D, 70, 2014
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1F75
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![BU of 1f75 by Molmil](/molmil-images/mine/1f75) | CRYSTAL STRUCTURE OF UNDECAPRENYL DIPHOSPHATE SYNTHASE FROM MICROCOCCUS LUTEUS B-P 26 | 分子名称: | SULFATE ION, UNDECAPRENYL PYROPHOSPHATE SYNTHETASE | 著者 | Fujihashi, M, Zhang, Y.-W, Higuchi, Y, Li, X.-Y, Koyama, T, Miki, K. | 登録日 | 2000-06-26 | 公開日 | 2001-03-28 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of cis-prenyl chain elongating enzyme, undecaprenyl diphosphate synthase. Proc.Natl.Acad.Sci.USA, 98, 2001
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2DJJ
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2YYS
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![BU of 2yys by Molmil](/molmil-images/mine/2yys) | Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8 | 分子名称: | GLYCEROL, Proline iminopeptidase-related protein | 著者 | Okai, M, Miyauchi, Y, Ebihara, A, Lee, W.C, Nagata, K, Tanokura, M. | 登録日 | 2007-05-01 | 公開日 | 2008-02-26 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of the proline iminopeptidase-related protein TTHA1809 from Thermus thermophilus HB8 Proteins, 70, 2008
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4ZID
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![BU of 4zid by Molmil](/molmil-images/mine/4zid) | Dimeric Hydrogenobacter thermophilus cytochrome c552 obtained from Escherichia coli | 分子名称: | Cytochrome c-552, HEME C | 著者 | Hayashi, Y, Yamanaka, M, Nagao, S, Komori, H, Higuchi, Y, Hirota, S. | 登録日 | 2015-04-28 | 公開日 | 2016-02-10 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Domain swapping oligomerization of thermostable c-type cytochrome in E. coli cells Sci Rep, 6, 2016
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6GHP
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![BU of 6ghp by Molmil](/molmil-images/mine/6ghp) | 14-3-3sigma in complex with a TASK3 peptide stabilized by semi-synthetic natural product FC-NAc | 分子名称: | 14-3-3 protein sigma, CHLORIDE ION, Potassium channel subfamily K member 9, ... | 著者 | Andrei, S.A, de Vink, P.J, Brunsveld, L, Ottmann, C, Higuchi, Y. | 登録日 | 2018-05-08 | 公開日 | 2018-08-01 | 最終更新日 | 2018-10-17 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Rationally Designed Semisynthetic Natural Product Analogues for Stabilization of 14-3-3 Protein-Protein Interactions. Angew. Chem. Int. Ed. Engl., 57, 2018
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4P7W
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![BU of 4p7w by Molmil](/molmil-images/mine/4p7w) | L-proline-bound L-proline cis-4-hydroxylase | 分子名称: | 2-OXOGLUTARIC ACID, COBALT (II) ION, L-proline cis-4-hydroxylase, ... | 著者 | Shomura, Y, Koketsu, K, Moriwaki, K, Hayashi, M, Mitsuhashi, S, Hara, R, Kino, K, Higuchi, Y. | 登録日 | 2014-03-28 | 公開日 | 2014-09-17 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Refined Regio- and Stereoselective Hydroxylation of l-Pipecolic Acid by Protein Engineering of l-Proline cis-4-Hydroxylase Based on the X-ray Crystal Structure. Acs Synth Biol, 4, 2015
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7VXQ
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![BU of 7vxq by Molmil](/molmil-images/mine/7vxq) | The Carbon Monoxide Complex of [NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 | 分子名称: | CARBON MONOXIDE, FE3-S4 CLUSTER, GLYCEROL, ... | 著者 | Nishikawa, K, Higuchi, K, Imanishi, T, Higuchi, Y. | 登録日 | 2021-11-13 | 公開日 | 2022-02-09 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.77 Å) | 主引用文献 | Structural and spectroscopic characterization of CO inhibition of [NiFe]-hydrogenase from Citrobacter sp. S-77. Acta Crystallogr.,Sect.F, 78, 2022
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5AWI
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![BU of 5awi by Molmil](/molmil-images/mine/5awi) | Domain-swapped cytochrome cb562 dimer | 分子名称: | HEME C, SULFATE ION, Soluble cytochrome b562, ... | 著者 | Miyamoto, T, Kuribayashi, M, Nagao, S, Shomura, Y, Higuchi, Y, Hirota, S. | 登録日 | 2015-07-03 | 公開日 | 2015-10-21 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Domain-swapped cytochrome cb562 dimer and its nanocage encapsulating a Zn-SO4 cluster in the internal cavity Chem Sci, 2015
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2Z2M
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![BU of 2z2m by Molmil](/molmil-images/mine/2z2m) | Cefditoren-Acylated Penicillin-Binding Protein 2X (PBP2X) from Streptococcus pneumoniae | 分子名称: | (2R)-2-[(1R)-1-{[(2Z)-2-(2-AMINO-1,3-THIAZOL-4-YL)-2-(METHOXYIMINO)ACETYL]AMINO}-2-OXOETHYL]-5-[(Z)-2-(4-METHYL-1,3-THIAZOL-5-YL)VINYL]-3,6-DIHYDRO-2H-1,3-THIAZINE-4-CARBOXYLIC ACID, Penicillin-binding protein 2X, SULFATE ION | 著者 | Yamada, M, Watanabe, T, Takeuchi, Y. | 登録日 | 2007-05-23 | 公開日 | 2007-09-04 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Crystal Structure of Cefditoren Complexed with Streptococcus pneumoniae Penicillin-Binding Protein 2X: Structural Basis for its High Antimicrobial Activity Antimicrob.Agents Chemother., 51, 2007
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4H4Q
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![BU of 4h4q by Molmil](/molmil-images/mine/4h4q) | Crystal Structure of Ferredoxin reductase, BphA4 E175Q/Q177K (reduced form) | 分子名称: | Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID | 著者 | Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S. | 登録日 | 2012-09-18 | 公開日 | 2013-10-09 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4 To be Published
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4H4Z
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![BU of 4h4z by Molmil](/molmil-images/mine/4h4z) | Crystal Structure of Ferredoxin reductase, BphA4 E175Q/T176R/Q177G mutant (oxidized form) | 分子名称: | Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ... | 著者 | Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S. | 登録日 | 2012-09-18 | 公開日 | 2013-10-09 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4 To be Published
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3VWR
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![BU of 3vwr by Molmil](/molmil-images/mine/3vwr) | Crystal structure of 6-aminohexanoate-dimer hydrolase S112A/G181D/R187G/H266N/D370Y mutant complexd with 6-aminohexanoate | 分子名称: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-AMINOHEXANOIC ACID, 6-aminohexanoate-dimer hydrolase, ... | 著者 | Kawashima, Y, Shibata, N, Negoro, S, Higuchi, Y. | 登録日 | 2012-08-30 | 公開日 | 2013-10-16 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | 主引用文献 | Structural, kinetic and theoretical analyses of hydrolase mutants altering in the directionality and equilibrium point of reversible amide-synthetic/hydrolytic reaction To be Published
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2ZC4
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![BU of 2zc4 by Molmil](/molmil-images/mine/2zc4) | Penicillin-binding protein 2X (PBP 2X) acyl-enzyme complex (tebipenem) from Streptococcus pneumoniae | 分子名称: | (4R,5S)-3-(1-(4,5-dihydrothiazol-2-yl)azetidin-3-ylthio)-5-((2S,3R)-3-hydroxy-1-oxobutan-2-yl)-4-methyl-4,5- dihydro-1H-pyrrole-2-carboxylic acid, Penicillin-binding protein 2X, SULFATE ION | 著者 | Yamada, M, Watanabe, T, Takeuchi, Y. | 登録日 | 2007-11-02 | 公開日 | 2008-04-08 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Crystal Structures of Biapenem and Tebipenem Complexed with Penicillin-Binding Proteins 2X and 1A from Streptococcus pneumoniae Antimicrob.Agents Chemother., 52, 2008
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4H50
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![BU of 4h50 by Molmil](/molmil-images/mine/4h50) | Crystal Structure of Ferredoxin reductase, BphA4 E175Q/T1776R/Q177G mutant (reduced form) | 分子名称: | Biphenyl dioxygenase ferredoxin reductase subunit, FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, ... | 著者 | Nishizawa, A, Harada, A, Senda, M, Tachihara, Y, Muramatsu, D, Kishigami, S, Mori, S, Sugiyama, K, Senda, T, Kimura, S. | 登録日 | 2012-09-18 | 公開日 | 2013-10-09 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.65 Å) | 主引用文献 | Random Mutagenesis with the Project Assessment for Complete Conversion of Co-Factor Specificity of a Ferredoxin Reductase BphA4 To be Published
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