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7SPO
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BU of 7spo by Molmil
Crystal structure of the SARS-CoV-2 receptor binding domain in complex with VNAR 3B4
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, ...
著者Shi, K, Aihara, H.
登録日2021-11-02
公開日2022-01-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Mechanisms of SARS-CoV-2 neutralization by shark variable new antigen receptors elucidated through X-ray crystallography.
Nat Commun, 12, 2021
7SZO
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BU of 7szo by Molmil
Structure of a bacterial fimbrial tip containing FocH
分子名称: Chaperone protein FimC, FimF protein, FimG, ...
著者Stenkamp, R.E, Le Trong, I, Aprikian, P, Sokurenko, E.V.
登録日2021-11-29
公開日2021-12-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Recombinant FimH Adhesin Demonstrates How the Allosteric Catch Bond Mechanism Can Support Fast and Strong Bacterial Attachment in the Absence of Shear.
J.Mol.Biol., 434, 2022
4BBX
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BU of 4bbx by Molmil
Discovery of a potent, selective and orally active PDE10A inhibitor for the treatment of schizophrenia
分子名称: 4-[3-[1-[(2S)-2-methoxypropyl]pyrazol-4-yl]-2-methyl-imidazo[1,2-a]pyrazin-8-yl]morpholine, CAMP AND CAMP-INHIBITED CGMP 3', 5'-CYCLIC PHOSPHODIESTERASE 10A, ...
著者Bartolome-Nebreda, J.M, Conde-Ceide, S, Delgado, F, Martin, M.L, Martinez-Viturro, C.M, Pastor, J, Tong, H.M, Iturrino, L, Macdonald, G.J, Sanderson, W, Megens, A, Langlois, X, Somers, M, Vanhoof, G.
登録日2012-09-28
公開日2013-10-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Discovery of a Potent, Selective and Orally Active Pde10A Inhibitor for the Potential Treatment of Schizophrenia.
J.Med.Chem., 57, 2014
4DXB
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BU of 4dxb by Molmil
2.29A structure of the engineered MBP TEM-1 fusion protein RG13 in complex with zinc, P1 space group
分子名称: Maltose-binding periplasmic protein, Beta-lactamase TEM chimera, ZINC ION
著者van den Akker, F, Ke, W.
登録日2012-02-27
公開日2012-08-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structure of an Engineered beta-Lactamase Maltose Binding Protein Fusion Protein: Insights into Heterotropic Allosteric Regulation.
Plos One, 7, 2012
5LQ4
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BU of 5lq4 by Molmil
The Structure of ThcOx, the First Oxidase Protein from the Cyanobactin Pathways
分子名称: CyaGox, FLAVIN MONONUCLEOTIDE
著者Bent, A.F, Wagner, A, Naismith, J.H.
登録日2016-08-16
公開日2016-11-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure of the cyanobactin oxidase ThcOx from Cyanothece sp. PCC 7425, the first structure to be solved at Diamond Light Source beamline I23 by means of S-SAD.
Acta Crystallogr D Struct Biol, 72, 2016
4DXC
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BU of 4dxc by Molmil
Crystal structure of the engineered MBP TEM-1 fusion protein RG13, C2 space group
分子名称: Maltose-binding periplasmic protein, Beta-lactamase TEM chimera, ZINC ION
著者van den Akker, F, Ke, W.
登録日2012-02-27
公開日2012-08-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of an Engineered beta-Lactamase Maltose Binding Protein Fusion Protein: Insights into Heterotropic Allosteric Regulation.
Plos One, 7, 2012
4E90
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BU of 4e90 by Molmil
Human phosphodiesterase 9 in complex with inhibitors
分子名称: 6-[(3S,4S)-4-methyl-1-(pyrimidin-2-ylmethyl)pyrrolidin-3-yl]-1-(tetrahydro-2H-pyran-4-yl)-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
著者Liu, S.
登録日2012-03-20
公開日2013-02-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Application of structure-based drug design and parallel chemistry to identify selective, brain penetrant, in vivo active phosphodiesterase 9A inhibitors.
J.Med.Chem., 55, 2012
3H0E
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BU of 3h0e by Molmil
3,4-Dihydropyrimido(1,2-a)indol-10(2H)-ones as Potent Non-Peptidic Inhibitors of Caspase-3
分子名称: (10S)-3,3-dimethyl-8-{[(2S)-2-(phenoxymethyl)pyrrolidin-1-yl]sulfonyl}-2,3,4,10-tetrahydropyrimido[1,2-a]indol-10-ol, Caspase-3
著者Xu, W.
登録日2009-04-09
公開日2009-11-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.997 Å)
主引用文献3,4-Dihydropyrimido(1,2-a)indol-10(2H)-ones as potent non-peptidic inhibitors of caspase-3
Bioorg.Med.Chem., 17, 2009
3GQ2
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BU of 3gq2 by Molmil
Crystal Structure of the Dimer of the p115 Tether Globular Head Domain
分子名称: General vesicular transport factor p115
著者An, Y, Elsliger, M.A, Wilson, I.A.
登録日2009-03-23
公開日2009-11-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structural and functional analysis of the globular head domain of p115 provides insight into membrane tethering.
J.Mol.Biol., 391, 2009
3GRL
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BU of 3grl by Molmil
Crystal Structure of the Monomer of the p115 Tether Globular Head Domain
分子名称: General vesicular transport factor p115, PHOSPHATE ION
著者An, Y, Elsliger, M.A, Wilson, I.A.
登録日2009-03-25
公開日2009-11-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional analysis of the globular head domain of p115 provides insight into membrane tethering.
J.Mol.Biol., 391, 2009
3IR2
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BU of 3ir2 by Molmil
Crystal structure of the APOBEC3G catalytic domain
分子名称: CHLORIDE ION, DNA dC->dU-editing enzyme APOBEC-3G, MAGNESIUM ION, ...
著者Shandilya, S.M.D, Schiffer, C.A.
登録日2009-08-21
公開日2010-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of the APOBEC3G Catalytic Domain Reveals Potential Oligomerization Interfaces.
Structure, 18, 2010
6CBJ
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BU of 6cbj by Molmil
Crystal Structure of DH270.3 Fab in complex with Man9
分子名称: DH270.3 Fab heavy chain, DH270.3 Fab light chain, PHOSPHATE ION, ...
著者Fera, D, Harrison, S.C.
登録日2018-02-03
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献HIV envelope V3 region mimic embodies key features of a broadly neutralizing antibody lineage epitope.
Nat Commun, 9, 2018
6CSN
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BU of 6csn by Molmil
Crystal structure of the designed light-gated anion channel iC++ at pH8.5
分子名称: CHLORIDE ION, OLEIC ACID, RETINAL, ...
著者Kato, H.E, Kim, Y, Yamashita, K, Kobilka, B.K, Deisseroth, K.
登録日2018-03-21
公開日2018-09-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural mechanisms of selectivity and gating in anion channelrhodopsins.
Nature, 561, 2018
6CSM
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BU of 6csm by Molmil
Crystal structure of the natural light-gated anion channel GtACR1
分子名称: GtACR1, OLEIC ACID, RETINAL
著者Kato, H.E, Kim, Y, Yamashita, K, Kobilka, B.K, Deisseroth, K.
登録日2018-03-21
公開日2018-09-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural mechanisms of selectivity and gating in anion channelrhodopsins.
Nature, 561, 2018
6CBP
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BU of 6cbp by Molmil
Crystal structure of the single chain variable fragment of the DH270.6 bnAb in complex with the Man9-V3 glycopeptide
分子名称: DH270.6 single chain variable fragment, Man9-V3 glycopeptide, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose, ...
著者Fera, D, Harrison, S.C.
登録日2018-02-03
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献HIV envelope V3 region mimic embodies key features of a broadly neutralizing antibody lineage epitope.
Nat Commun, 9, 2018
6CSO
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BU of 6cso by Molmil
Crystal structure of the designed light-gated anion channel iC++ at pH6.5
分子名称: OLEIC ACID, RETINAL, iC++
著者Kato, H.E, Kim, Y, Yamashita, K, Kobilka, B.K, Deisseroth, K.
登録日2018-03-21
公開日2018-09-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural mechanisms of selectivity and gating in anion channelrhodopsins.
Nature, 561, 2018
3JWN
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BU of 3jwn by Molmil
Complex of FimC, FimF, FimG and FimH
分子名称: Chaperone protein fimC, FimH protein, GLYCEROL, ...
著者Le Trong, I, Aprikian, P, Stenkamp, R.E, Sokurenko, E.V.
登録日2009-09-18
公開日2010-06-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structural basis for mechanical force regulation of the adhesin FimH via finger trap-like beta sheet twisting.
Cell(Cambridge,Mass.), 141, 2010
3A2O
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BU of 3a2o by Molmil
Crystal Structure of HIV-1 Protease Complexed with KNI-1689
分子名称: (4R)-3-[(2S,3S)-3-{[(4-amino-2,6-dimethylphenoxy)acetyl]amino}-2-hydroxy-4-phenylbutanoyl]-5,5-dimethyl-N-(2-methylprop -2-en-1-yl)-1,3-thiazolidine-4-carboxamide, GLYCEROL, PROTEASE
著者Adachi, M, Tamada, T, Hidaka, K, Kimura, T, Kiso, Y, Kuroki, R.
登録日2009-05-26
公開日2010-03-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (0.88 Å)
主引用文献Small-sized human immunodeficiency virus type-1 protease inhibitors containing allophenylnorstatine to explore the S2' pocket.
J.Med.Chem., 52, 2009
3CB8
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BU of 3cb8 by Molmil
4Fe-4S-Pyruvate formate-lyase activating enzyme in complex with AdoMet and a peptide substrate
分子名称: FORMIC ACID, IRON/SULFUR CLUSTER, Pyruvate formate-lyase 1-activating enzyme, ...
著者Vey, J.L, Drennan, C.L.
登録日2008-02-21
公開日2008-10-28
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Structural basis for glycyl radical formation by pyruvate formate-lyase activating enzyme.
Proc.Natl.Acad.Sci.Usa, 105, 2008
6UVS
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BU of 6uvs by Molmil
Human Connexin-26 (Low pH open conformation)
分子名称: Gap junction beta-2 protein
著者Khan, A.K, Jagielnicki, M, Purdy, M.D, Yeager, M.
登録日2019-11-04
公開日2020-04-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献A Steric "Ball-and-Chain" Mechanism for pH-Mediated Regulation of Gap Junction Channels.
Cell Rep, 31, 2020
4G2L
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BU of 4g2l by Molmil
Human PDE9 in complex with selective compound
分子名称: 1-cyclopentyl-6-{(1R)-1-[3-(pyrimidin-2-yl)azetidin-1-yl]ethyl}-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
著者Liu, S.
登録日2012-07-12
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Application of structure-based drug design and parallel chemistry to identify selective, brain penetrant, in vivo active phosphodiesterase 9A inhibitors.
J.Med.Chem., 55, 2012
4G2J
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BU of 4g2j by Molmil
Human pde9 in complex with selective compound
分子名称: 1-cyclopentyl-6-[(1R)-1-(3-phenoxyazetidin-1-yl)ethyl]-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
著者Liu, S.
登録日2012-07-12
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Application of structure-based drug design and parallel chemistry to identify selective, brain penetrant, in vivo active phosphodiesterase 9A inhibitors.
J.Med.Chem., 55, 2012
6UVT
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BU of 6uvt by Molmil
Human Connexin-26 (Low pH closed conformation)
分子名称: Gap junction beta-2 protein
著者Khan, A.K, Jagielnicki, M, Purdy, M.D, Yeager, M.
登録日2019-11-04
公開日2020-04-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献A Steric 'Ball-and-Chain' Mechanism for pH-Mediated Regulation of Gap Junction Channels
Cell Rep, 31, 2020
6UVR
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BU of 6uvr by Molmil
Human Connexin-26 (Neutral pH open conformation)
分子名称: Gap junction beta-2 protein
著者Khan, A.K, Jagielnicki, M, Purdy, M.D, Yeager, M.
登録日2019-11-04
公開日2020-04-29
最終更新日2020-05-06
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献A Steric "Ball-and-Chain" Mechanism for pH-Mediated Regulation of Gap Junction Channels.
Cell Rep, 31, 2020
6V2F
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BU of 6v2f by Molmil
Crystal structure of the HIV capsid hexamer bound to the small molecule long-acting inhibitor, GS-6207
分子名称: HIV-1 capsid, N-[(1S)-1-(3-{4-chloro-3-[(methylsulfonyl)amino]-1-(2,2,2-trifluoroethyl)-1H-indazol-7-yl}-6-[3-methyl-3-(methylsulfonyl)but-1-yn-1-yl]pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl]-2-[(3bS,4aR)-5,5-difluoro-3-(trifluoromethyl)-3b,4,4a,5-tetrahydro-1H-cyclopropa[3,4]cyclopenta[1,2-c]pyrazol-1-yl]acetamide
著者Appleby, T.C, Link, J.O, Yant, S.R, Villasenor, A.G, Somoza, J.R, Hu, E.Y, Schroeder, S.D, Cihlar, T.
登録日2019-11-22
公開日2020-07-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Clinical targeting of HIV capsid protein with a long-acting small molecule.
Nature, 584, 2020

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