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2EFL
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BU of 2efl by Molmil
Crystal structure of the EFC domain of formin-binding protein 17
分子名称: Formin-binding protein 1
著者Shimada, A, Niwa, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-02-23
公開日2007-05-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Curved EFC/F-BAR-Domain Dimers Are Joined End to End into a Filament for Membrane Invagination in Endocytosis
Cell(Cambridge,Mass.), 129, 2007
2EFK
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BU of 2efk by Molmil
Crystal structure of the EFC domain of Cdc42-interacting protein 4
分子名称: Cdc42-interacting protein 4
著者Shimada, A, Niwa, H, Chen, L, Liu, Z.-J, Wang, B.-C, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-02-23
公開日2007-05-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Curved EFC/F-BAR-Domain Dimers Are Joined End to End into a Filament for Membrane Invagination in Endocytosis
Cell(Cambridge,Mass.), 129, 2007
2DB4
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BU of 2db4 by Molmil
Crystal structure of rotor ring with DCCD of the V- ATPase from Enterococcus hirae
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, DICYCLOHEXYLUREA, SODIUM ION, ...
著者Murata, T, Yamato, I, Kakinuma, Y, Shirouzu, M, Walker, J.E, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-15
公開日2006-12-05
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the rotor ring modified with N,N'-dicyclohexylcarbodiimide of the Na+-transporting vacuolar ATPase.
Proc.Natl.Acad.Sci.USA, 108, 2011
1EWT
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BU of 1ewt by Molmil
CRYSTAL STRUCTURE OF METABOTROPIC GLUTAMATE RECEPTOR SUBTYPE 1 LIGAND FREE FORM I
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, METABOTROPIC GLUTAMATE RECEPTOR SUBTYPE 1, SULFATE ION
著者Kunishima, N, Shimada, Y, Tsuji, Y, Jingami, H, Morikawa, K.
登録日2000-04-27
公開日2000-12-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor.
Nature, 407, 2000
5B2Z
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BU of 5b2z by Molmil
H-Ras WT in complex with GppNHp (state 2*) before structural transition by humidity control
分子名称: CALCIUM ION, GTPase HRas, MAGNESIUM ION, ...
著者Kumasaka, T, Miyano, N, Baba, S, Matsumoto, S, Kataoka, T, Shima, F.
登録日2016-02-07
公開日2016-06-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Molecular Mechanism for Conformational Dynamics of Ras-GTP Elucidated from In-Situ Structural Transition in Crystal
Sci Rep, 6, 2016
5B4X
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BU of 5b4x by Molmil
Crystal structure of the ApoER2 ectodomain in complex with the Reelin R56 fragment
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Low density lipoprotein receptor-related protein 8, ...
著者Yasui, N, Hirai, H, Yamashita, K, Takagi, J, Nogi, T.
登録日2016-04-20
公開日2017-04-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of the ectodomain from a LDLR close homologue in complex with its physiological ligand.
To Be Published
2FR6
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BU of 2fr6 by Molmil
Crystal Structure of Mouse Cytidine Deaminase Complexed with Cytidine
分子名称: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, AMMONIA, Cytidine deaminase, ...
著者Teh, A.H.
登録日2006-01-19
公開日2006-07-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献The 1.48 A Resolution Crystal Structure of the Homotetrameric Cytidine Deaminase from Mouse
Biochemistry, 45, 2006
5B30
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BU of 5b30 by Molmil
H-Ras WT in complex with GppNHp (state 1) after structural transition by humidity control
分子名称: CALCIUM ION, GTPase HRas, MAGNESIUM ION, ...
著者Kumasaka, T, Miyano, N, Baba, S, Matsumoto, S, Kataoka, T, Shima, F.
登録日2016-02-08
公開日2016-06-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular Mechanism for Conformational Dynamics of Ras-GTP Elucidated from In-Situ Structural Transition in Crystal
Sci Rep, 6, 2016
2FR5
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BU of 2fr5 by Molmil
Crystal Structure of Mouse Cytidine Deaminase Complexed with Tetrahydrouridine
分子名称: Cytidine deaminase, SULFATE ION, TETRAHYDROURIDINE, ...
著者Teh, A.H.
登録日2006-01-19
公開日2006-07-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献The 1.48 A Resolution Crystal Structure of the Homotetrameric Cytidine Deaminase from Mouse
Biochemistry, 45, 2006
5B4Y
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BU of 5b4y by Molmil
Crystal structure of the LA12 fragment of ApoER2
分子名称: CALCIUM ION, Low-density lipoprotein receptor-related protein 8
著者Nogi, T, Tabata, S, Hirai, H, Yasui, N, Takagi, J.
登録日2016-04-20
公開日2017-04-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the ectodomain from a LDLR close homologue in complex with its physiological ligand.
To Be Published
1WQS
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BU of 1wqs by Molmil
Crystal structure of Norovirus 3C-like protease
分子名称: 3C-like protease, D(-)-TARTARIC ACID, L(+)-TARTARIC ACID, ...
著者Nakamura, K, Someya, Y, Kumasaka, T, Tanaka, N.
登録日2004-10-01
公開日2005-10-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A norovirus protease structure provides insights into active and substrate binding site integrity
J.Virol., 79, 2005
1EWV
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BU of 1ewv by Molmil
CRYSTAL STRUCTURE OF METABOTROPIC GLUTAMATE RECEPTOR SUBTYPE 1 LIGAND FREE FORM II
分子名称: METABOTROPIC GLUTAMATE RECEPTOR SUBTYPE 1
著者Kunishima, N, Shimada, Y, Tsuji, Y, Jingami, H, Morikawa, K.
登録日2000-04-27
公開日2000-12-18
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor.
Nature, 407, 2000
1EWK
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BU of 1ewk by Molmil
CRYSTAL STRUCTURE OF METABOTROPIC GLUTAMATE RECEPTOR SUBTYPE 1 COMPLEXED WITH GLUTAMATE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLUTAMIC ACID, ...
著者Kunishima, N, Shimada, Y, Jingami, H, Morikawa, K.
登録日2000-04-26
公開日2000-12-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor.
Nature, 407, 2000
8JS5
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BU of 8js5 by Molmil
Dimeric PAS domains of oxygen sensor FixL with ferric unliganded heme
分子名称: GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, Sensor protein FixL
著者Kamaya, M, Koteishi, H, Sawai, H, Sugimoto, H, Shiro, Y.
登録日2023-06-19
公開日2024-06-26
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Dimeric PAS domains of oxygen sensor FixL in complex with imidazole-bound heme.
To be published
8JS7
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BU of 8js7 by Molmil
Dimeric PAS domains of oxygen sensor FixL in complex with imidazole-bound heme
分子名称: GLYCEROL, IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Kamaya, M, Koteishi, H, Sawai, H, Sugimoto, H, Shiro, Y.
登録日2023-06-19
公開日2024-06-26
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Dimeric PAS domains of oxygen sensor FixL in complex with imidazole-bound heme.
To be published
8JS6
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BU of 8js6 by Molmil
Dimeric PAS domains of oxygen sensor FixL in complex with cyanide-bound ferric heme
分子名称: CYANIDE ION, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Kamaya, M, Koteishi, H, Sawai, H, Sugimoto, H, Shiro, Y.
登録日2023-06-19
公開日2024-06-26
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Dimeric PAS domains of oxygen sensor FixL in complex with imidazole-bound heme.
To be published
1GV2
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BU of 1gv2 by Molmil
CRYSTAL STRUCTURE OF C-MYB R2R3
分子名称: MYB PROTO-ONCOGENE PROTEIN, SODIUM ION
著者Tahirov, T.H, Ogata, K.
登録日2002-02-05
公開日2003-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Crystal Structure of C-Myb DNA-Binding Domain: Specific Na+ Binding and Correlation with NMR Structure
To be Published
1GV5
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BU of 1gv5 by Molmil
CRYSTAL STRUCTURE OF C-MYB R2
分子名称: MYB PROTO-ONCOGENE PROTEIN, SODIUM ION
著者Tahirov, T.H, Ogata, K.
登録日2002-02-06
公開日2003-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal Structure of C-Myb DNA-Binding Domain: Specific Na+ Binding and Correlation with NMR Structure
To be Published
1GUU
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BU of 1guu by Molmil
CRYSTAL STRUCTURE OF C-MYB R1
分子名称: MYB PROTO-ONCOGENE PROTEIN, SODIUM ION
著者Tahirov, T.H, Ogata, K.
登録日2002-01-30
公開日2003-06-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of C-Myb DNA-Binding Domain: Specific Na+ Binding and Correlation with NMR Structure
To be Published
1GVD
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BU of 1gvd by Molmil
CRYSTAL STRUCTURE OF C-MYB R2 V103L MUTANT
分子名称: AMMONIUM ION, MYB PROTO-ONCOGENE PROTEIN, SULFATE ION
著者Tahirov, T.H, Ogata, K.
登録日2002-02-08
公開日2003-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal Structure of C-Myb DNA-Binding Domain: Specific Na+ Binding and Correlation with NMR Structure
To be Published
2DYH
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BU of 2dyh by Molmil
Crystal structure of the Keap1 protein in complexed with the N-terminal region of the Nrf2 transcription factor
分子名称: Kelch-like ECH-associated protein 1, Nrf2/Neh2 peptide from Nuclear factor erythroid 2-related factor 2, SULFATE ION
著者Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-14
公開日2007-09-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Different electrostatic potentials define ETGE and DLG motifs as hinge and latch in oxidative stress response
Mol.Cell.Biol., 27, 2007
7DZY
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BU of 7dzy by Molmil
Spike protein from SARS-CoV2 with Fab fragment of enhancing antibody 2490
分子名称: Fab Heavy chain of enhancing antibody 2490, Fab light chain of enhancing antibody 2490, Spike glycoprotein
著者Liu, Y, Soh, W.T, Li, S, Kishikawa, J, Hirose, M, Kato, T, Standley, D, Okada, M, Arase, H.
登録日2021-01-26
公開日2021-06-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Cell, 184, 2021
7DZX
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BU of 7dzx by Molmil
Spike protein from SARS-CoV2 with Fab fragment of enhancing antibody 8D2
分子名称: Fab Heavy chain of enhancing antibody, Fab light chain of enhancing antibody, Spike glycoprotein
著者Liu, Y, Soh, W.T, Li, S, Kishikawa, J, Hirose, M, Kato, T, Standley, D, Okada, M, Arase, H.
登録日2021-01-26
公開日2021-06-02
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.53 Å)
主引用文献An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Cell, 184, 2021
7DZW
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BU of 7dzw by Molmil
Apo spike protein from SARS-CoV2
分子名称: Spike glycoprotein
著者Liu, Y, Soh, W.T, Li, S, Kishikawa, J, Hirose, M, Kato, T, Standley, D, Okada, M, Arase, H.
登録日2021-01-26
公開日2021-06-02
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Cell, 184, 2021
3A5X
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BU of 3a5x by Molmil
L-type straight flagellar filament made of full-length flagellin
分子名称: Flagellin
著者Maki-Yonekura, S, Yonekura, K, Namba, K.
登録日2009-08-13
公開日2010-03-16
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Conformational change of flagellin for polymorphic supercoiling of the flagellar filament
Nat.Struct.Mol.Biol., 17, 2010

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