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Crystal structure of GH1 beta-glucosidase Td2F2
分子名称:	2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, SODIUM ION, ...
著者	Jo, T, Fushinobu, S, Uchiyama, T, Yaoi, K.
登録日	2013-08-21
公開日	2014-09-03
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.6 Å)
主引用文献	Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2. Febs J., 283, 2016

3WH6

Crystal structure of GH1 beta-glucosidase Td2F2 glucose complex
分子名称:	2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, SODIUM ION, alpha-D-glucopyranose, ...
著者	Jo, T, Fushinobu, S, Uchiyama, T, Yaoi, K.
登録日	2013-08-21
公開日	2014-09-03
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.6 Å)
主引用文献	Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2. Febs J., 283, 2016

3WH7

Crystal structure of GH1 beta-glucosidase Td2F2 L-fucose complex
分子名称:	2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, SODIUM ION, beta-D-fucopyranose, ...
著者	Jo, T, Fushinobu, S, Uchiyama, T, Yaoi, K.
登録日	2013-08-21
公開日	2014-09-03
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.1 Å)
主引用文献	Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2. Febs J., 283, 2016

3WH8

Crystal structure of GH1 beta-glucosidase Td2F2 isofagomine complex
分子名称:	2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, GLYCEROL, ...
著者	Jo, T, Fushinobu, S, Uchiyama, T, Yaoi, K.
登録日	2013-08-21
公開日	2014-09-03
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic beta-glucosidase Td2F2. Febs J., 283, 2016

1EHL

64M-2 ANTIBODY FAB COMPLEXED WITH D(5HT)(6-4)T
分子名称:	5'-(D(5HT)P*(6-4)T)-3', ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (HEAVY CHAIN), ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (LIGHT CHAIN)
著者	Yokoyama, H, Mizutani, R, Satow, Y, Komatsu, Y, Ohtsuka, E, Nikaido, O.
登録日	2000-02-21
公開日	2001-02-21
最終更新日	2011-07-13
実験手法	X-RAY DIFFRACTION (2.4 Å)
主引用文献	Crystal structure of the 64M-2 antibody Fab fragment in complex with a DNA dT(6-4)T photoproduct formed by ultraviolet radiation. J.Mol.Biol., 299, 2000

5WQJ

Crystal structure of 3-Mercaptopyruvate Sulfurtransferase(3MST) in complex with compound1
分子名称:	2-[2-[(4-oxidanylidene-3~{H}-quinazolin-2-yl)sulfanyl]ethanoylamino]thiophene-3-carboxamide, SODIUM ION, Sulfurtransferase
著者	Suwanai, Y, Toma-Fukai, S, Shimizu, T.
登録日	2016-11-27
公開日	2017-09-06
実験手法	X-RAY DIFFRACTION (1.2 Å)
主引用文献	Discovery and Mechanistic Characterization of Selective Inhibitors of H2S-producing Enzyme: 3-Mercaptopyruvate Sulfurtransferase (3MST) Targeting Active-site Cysteine Persulfide Sci Rep, 7, 2017

1RBS

STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
分子名称:	RIBONUCLEASE H
著者	Ishikawa, K, Kimura, S, Kanaya, S, Morikawa, K, Nakamura, H.
登録日	1993-02-16
公開日	1994-01-31
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Structural study of mutants of Escherichia coli ribonuclease HI with enhanced thermostability. Protein Eng., 6, 1993

1RDB

CRYSTAL STRUCTURES OF RIBONUCLEASE HI ACTIVE SITE MUTANTS FROM ESCHERICHIA COLI
分子名称:	RIBONUCLEASE H
著者	Katayanagi, K, Morikawa, K.
登録日	1993-06-23
公開日	1993-10-31
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Crystal structures of ribonuclease HI active site mutants from Escherichia coli. J.Biol.Chem., 268, 1993

1RBU

STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
分子名称:	RIBONUCLEASE H
著者	Ishikawa, K, Kimura, S, Kanaya, S, Morikawa, K, Nakamura, H.
登録日	1993-02-16
公開日	1994-01-31
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Structural study of mutants of Escherichia coli ribonuclease HI with enhanced thermostability. Protein Eng., 6, 1993

1RDD

CRYSTAL STRUCTURE OF ESCHERICHIA COLI RNASE HI IN COMPLEX WITH MG2+ AT 2.8 ANGSTROMS RESOLUTION: PROOF FOR A SINGLE MG2+ SITE
分子名称:	MAGNESIUM ION, RIBONUCLEASE H
著者	Katayanagi, K, Morikawa, K.
登録日	1993-06-23
公開日	1993-10-31
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (2.8 Å)
主引用文献	Crystal structure of Escherichia coli RNase HI in complex with Mg2+ at 2.8 A resolution: proof for a single Mg(2+)-binding site. Proteins, 17, 1993

1RDC

CRYSTAL STRUCTURES OF RIBONUCLEASE HI ACTIVE SITE MUTANTS FROM ESCHERICHIA COLI
分子名称:	RIBONUCLEASE H
著者	Katayanagi, K, Morikawa, K.
登録日	1993-06-23
公開日	1993-10-31
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Crystal structures of ribonuclease HI active site mutants from Escherichia coli. J.Biol.Chem., 268, 1993

1RBV

STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY
分子名称:	RIBONUCLEASE H
著者	Ishikawa, K, Kimura, S, Kanaya, S, Morikawa, K, Nakamura, H.
登録日	1993-02-16
公開日	1994-01-31
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Structural study of mutants of Escherichia coli ribonuclease HI with enhanced thermostability. Protein Eng., 6, 1993

6GF6

Molecular basis of egg coat filament cross-linking: high-resolution structure of the partially deglycosylated ZP1 ZP-N1 domain homodimer
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1
著者	Nishimura, K, Jovine, L.
登録日	2018-04-29
公開日	2019-06-19
最終更新日	2024-05-01
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility. Nat Commun, 10, 2019

6GF7

Molecular basis of egg coat filament cross-linking: Zn-SAD structure of the partially deglycosylated ZP1 ZP-N1 domain homodimer
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, ZINC ION, Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1
著者	Nishimura, K, Jovine, L.
登録日	2018-04-29
公開日	2019-06-19
最終更新日	2020-07-29
実験手法	X-RAY DIFFRACTION (2.7 Å)
主引用文献	Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility. Nat Commun, 10, 2019

6GF8

Molecular basis of egg coat filament cross-linking: structure of the glycosylated ZP1 ZP-N1 domain homodimer
分子名称:	(4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者	Nishimura, K, Jovine, L.
登録日	2018-04-29
公開日	2019-06-19
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (3.1 Å)
主引用文献	Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility. Nat Commun, 10, 2019

7C7F

Crystal structures of AKR1C3 binary complex with NADP+
分子名称:	1,2-ETHANEDIOL, ACETATE ION, Aldo-keto reductase family 1 member C3, ...
著者	Irie, K, Toyooka, N, Endo, S.
登録日	2020-05-25
公開日	2020-09-23
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.7 Å)
主引用文献	Development of Novel AKR1C3 Inhibitors as New Potential Treatment for Castration-Resistant Prostate Cancer. J.Med.Chem., 63, 2020

7C7G

Crystal structures of AKR1C3 ternary complex with NADP+ and the chromene derivative 2j
分子名称:	2-azanylidene-N-(4-methylphenyl)-8-oxidanyl-chromene-3-carboxamide, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者	Irie, K, Toyooka, N, Endo, S.
登録日	2020-05-25
公開日	2020-09-23
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.86 Å)
主引用文献	Development of Novel AKR1C3 Inhibitors as New Potential Treatment for Castration-Resistant Prostate Cancer. J.Med.Chem., 63, 2020

7C7H

Crystal structures of AKR1C3 ternary complex with NADP+ and the chromene derivative 2l
分子名称:	2-azanylidene-N-(3-ethylphenyl)-8-oxidanyl-chromene-3-carboxamide, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者	Irie, K, Toyooka, N, Endo, S.
登録日	2020-05-25
公開日	2020-09-23
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.86 Å)
主引用文献	Development of Novel AKR1C3 Inhibitors as New Potential Treatment for Castration-Resistant Prostate Cancer. J.Med.Chem., 63, 2020

1GZA

PEROXIDASE
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, IODIDE ION, ...
著者	Fukuyama, K, Itakura, H.
登録日	1996-11-13
公開日	1997-03-12
最終更新日	2020-07-29
実験手法	X-RAY DIFFRACTION (2.06 Å)
主引用文献	Binding of iodide to Arthromyces ramosus peroxidase investigated with X-ray crystallographic analysis, 1H and 127I NMR spectroscopy, and steady-state kinetics. J.Biol.Chem., 272, 1997

1HSR

BINDING MODE OF BENZHYDROXAMIC ACID TO ARTHROMYCES RAMOSUS PEROXIDASE
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BENZHYDROXAMIC ACID, CALCIUM ION, ...
著者	Fukuyama, K, Itakura, H.
登録日	1997-07-01
公開日	1998-07-01
最終更新日	2020-07-29
実験手法	X-RAY DIFFRACTION (1.6 Å)
主引用文献	Binding mode of benzhydroxamic acid to Arthromyces ramosus peroxidase shown by X-ray crystallographic analysis of the complex at 1.6 A resolution. FEBS Lett., 412, 1997

1GZB

PEROXIDASE
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, PEROXIDASE, ...
著者	Fukuyama, K, Kunishima, N, Amada, F.
登録日	1996-11-13
公開日	1997-03-12
最終更新日	2020-07-29
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Pentacoordination of the heme iron of Arthromyces ramosus peroxidase shown by a 1.8 A resolution crystallographic study at pH 4.5. FEBS Lett., 378, 1996

2YVC

Crystal structure of the Radixin FERM domain complexed with the NEP cytoplasmic tail
分子名称:	Neprilysin, Radixin
著者	Terawaki, S, Kitano, K, Hakoshima, T.
登録日	2007-04-11
公開日	2007-04-24
最終更新日	2023-10-25
実験手法	X-RAY DIFFRACTION (3.2 Å)
主引用文献	Structural basis for type II membrane protein binding by ERM proteins revealed by the radixin-neutral endopeptidase 24.11 (NEP) complex J.Biol.Chem., 282, 2007

3NK3

Crystal structure of full-length sperm receptor ZP3 at 2.6 A resolution
分子名称:	CITRATE ANION, Zona pellucida 3, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose
著者	Monne, M, Jovine, L.
登録日	2010-06-18
公開日	2010-11-10
最終更新日	2023-09-06
実験手法	X-RAY DIFFRACTION (2.6 Å)
主引用文献	Insights into Egg Coat Assembly and Egg-Sperm Interaction from the X-Ray Structure of Full-Length ZP3. Cell(Cambridge,Mass.), 143, 2010

1C8I

BINDING MODE OF HYDROXYLAMINE TO ARTHROMYCES RAMOSUS PEROXIDASE
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, HYDROXYAMINE, ...
著者	Wariishi, H, Nonaka, D, Johjima, T, Nakamura, N, Naruta, Y, Kubo, K, Fukuyama, K.
登録日	2000-05-08
公開日	2001-01-17
最終更新日	2023-08-09
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Direct binding of hydroxylamine to the heme iron of Arthromyces ramosus peroxidase. Substrate analogue that inhibits compound I formation in a competetive manner. J.Biol.Chem., 275, 2000

1CK6

BINDING MODE OF SALICYLHYDROXAMIC ACID TO ARTHROMYCES RAMOSUS PEROXIDASE
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, PROTEIN (PEROXIDASE), ...
著者	Fukuyama, K, Itakura, H.
登録日	1999-04-28
公開日	1999-12-29
最終更新日	2023-08-09
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Binding of salicylhydroxamic acid and several aromatic donor molecules to Arthromyces ramosus peroxidase, investigated by X-ray crystallography, optical difference spectroscopy, NMR relaxation, molecular dynamics, and kinetics. Biochemistry, 38, 1999

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