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1MH6
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BU of 1mh6 by Molmil
Solution Structure of the Transposon Tn5-encoding Bleomycin-binding Protein, BLMT
分子名称: BLEOMYCIN RESISTANCE PROTEIN
著者Kumagai, T, Ohtani, K, Tsuboi, Y, Koike, T, Sugiyama, M.
登録日2002-08-19
公開日2003-02-19
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the transposon Tn5-encoding bleomycin-binding protein complexed with an activated bleomycin analogue.
To be published
1V8E
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BU of 1v8e by Molmil
Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase from Thermus thermophilus HB8
分子名称: putative glycerophosphoryl diester phosphodiesterase
著者Ishijima, J, Ida, K, Yutani, K, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-01-05
公開日2005-01-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of glycerophosphoryl diester phosphodiesterase from Thermus thermophilus HB8
To be Published
1V8Z
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BU of 1v8z by Molmil
X-ray crystal structure of the Tryptophan Synthase b2 Subunit from Hyperthermophile, Pyrococcus furiosus
分子名称: PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, Tryptophan synthase beta chain 1
著者Hioki, Y, Ogasahara, K, Lee, S.J, Ma, J, Ishida, M, Yamagata, Y, Matsuura, Y, Ota, M, Kuramitsu, S, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-01-15
公開日2005-02-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献The crystal structure of the tryptophan synthase beta subunit from the hyperthermophile Pyrococcus furiosus. Investigation of stabilization factors
Eur.J.Biochem., 271, 2004
2Z9W
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BU of 2z9w by Molmil
Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxal
分子名称: 3-HYDROXY-5-(HYDROXYMETHYL)-2-METHYLISONICOTINALDEHYDE, Aspartate aminotransferase, GLYCEROL, ...
著者Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
登録日2007-09-26
公開日2007-11-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
2ZWB
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BU of 2zwb by Molmil
Neutron crystal structure of wild type human lysozyme in D2O
分子名称: Lysozyme C
著者Chiba-Kamoshida, K, Matsui, T, Chatake, T, Ohhara, T, Ostermann, A, Tanaka, I, Yutani, K, Niimura, N.
登録日2008-12-02
公開日2009-12-08
最終更新日2023-11-01
実験手法NEUTRON DIFFRACTION (1.8 Å)
主引用文献Site-specific softening of peptide bonds by localized deuterium observed by neutron crystallography of human lysozyme
To be Published
2ZPI
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BU of 2zpi by Molmil
Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 440min at 293K
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, MAGNESIUM ION, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-11
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.491 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2ZPB
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nitrosylated Fe-type nitrile hydratase
分子名称: FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-09
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
1IOC
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BU of 1ioc by Molmil
CRYSTAL STRUCTURE OF MUTANT HUMAN LYSOZYME, EAEA-I56T
分子名称: LYSOZYME C, SODIUM ION
著者Goda, S, Takano, K, Yamagata, Y, Yutani, K.
登録日2001-02-27
公開日2002-10-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Elongation in a beta-structure promotes amyloid-like fibril formation of human lysozyme.
J.Biochem., 132, 2002
1GF3
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BU of 1gf3 by Molmil
BURIED POLAR MUTANT HUMAN LYSOZYME
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Yutani, K.
登録日2000-11-30
公開日2001-04-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of polar groups in the interior of a protein to the conformational stability.
Biochemistry, 40, 2001
1GF0
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BU of 1gf0 by Molmil
BURIED POLAR MUTANT HUMAN LYSOZYME
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Yutani, K.
登録日2000-11-30
公開日2001-04-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of polar groups in the interior of a protein to the conformational stability.
Biochemistry, 40, 2001
1GF6
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BU of 1gf6 by Molmil
BURIED POLAR MUTANT HUMAN LYSOZYME
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Yutani, K.
登録日2000-11-30
公開日2001-04-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of polar groups in the interior of a protein to the conformational stability.
Biochemistry, 40, 2001
2Z9X
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BU of 2z9x by Molmil
Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxyl-L-alanine
分子名称: 3-HYDROXY-5-(HYDROXYMETHYL)-2-METHYLISONICOTINALDEHYDE, ALANINE, Aspartate aminotransferase, ...
著者Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
登録日2007-09-26
公開日2007-11-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
1V5X
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BU of 1v5x by Molmil
Crystal structure of Phosphoribosyl anthranilate isomerase from Thermus Thermophilus
分子名称: Phosphoribosylanthranilate isomerase
著者Taka, J, Kunishima, N, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-11-26
公開日2003-12-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Stabilization due to dimer formation of phosphoribosyl anthranilate isomerase from Thermus thermophilus HB8: X-ray Analysis and DSC experiments.
J.Biochem.(Tokyo), 137, 2005
1GEZ
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BU of 1gez by Molmil
BURIED POLAR MUTANT HUMAN LYSOZYME
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Yutani, K.
登録日2000-11-30
公開日2001-04-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of polar groups in the interior of a protein to the conformational stability.
Biochemistry, 40, 2001
1GF4
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BU of 1gf4 by Molmil
BURIED POLAR MUTANT HUMAN LYSOZYME
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Yutani, K.
登録日2000-11-30
公開日2001-04-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of polar groups in the interior of a protein to the conformational stability.
Biochemistry, 40, 2001
2ZPG
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BU of 2zpg by Molmil
Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 120min at 293K
分子名称: FE (III) ION, MAGNESIUM ION, Nitrile hydratase subunit alpha, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-11
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2Z9V
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BU of 2z9v by Molmil
Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxamine
分子名称: 4-(AMINOMETHYL)-5-(HYDROXYMETHYL)-2-METHYLPYRIDIN-3-OL, Aspartate aminotransferase, GLYCEROL, ...
著者Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
登録日2007-09-26
公開日2007-11-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
2ZPH
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BU of 2zph by Molmil
Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 340min at 293K
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, MAGNESIUM ION, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-11
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2Z9U
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BU of 2z9u by Molmil
Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti at 2.0 A resolution
分子名称: Aspartate aminotransferase, GLYCEROL, SULFATE ION
著者Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
登録日2007-09-26
公開日2007-11-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
2ZPF
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Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 18min at 293K
分子名称: FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-11
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.482 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
1GEV
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BURIED POLAR MUTANT HUMAN LYSOZYME
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Yutani, K.
登録日2000-11-30
公開日2001-04-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Contribution of polar groups in the interior of a protein to the conformational stability.
Biochemistry, 40, 2001
1GF5
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BU of 1gf5 by Molmil
BURIED POLAR MUTANT HUMAN LYSOZYME
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Yutani, K.
登録日2000-11-30
公開日2001-04-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of polar groups in the interior of a protein to the conformational stability.
Biochemistry, 40, 2001
2ZPE
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nitrosylated Fe-type nitrile hydratase with tert-butylisonitrile
分子名称: FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-10
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
1GF7
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BU of 1gf7 by Molmil
BURIED POLAR MUTANT HUMAN LYSOZYME
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Yutani, K.
登録日2000-11-30
公開日2001-04-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of polar groups in the interior of a protein to the conformational stability
Biochemistry, 40, 2001
3AA8
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Crystal Structure Analysis of the Mutant CutA1 (S11V/E61V) from E. coli
分子名称: Divalent-cation tolerance protein cutA
著者Matsuura, Y, Tanaka, T, Bagautdinov, B, Kunishima, N, Yutani, K.
登録日2009-11-12
公開日2010-08-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Remarkable improvement in the heat stability of CutA1 from Escherichia coli by rational protein design
J.Biochem., 148, 2010

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