9XBN
Cryo-EM structure of Sup35NM fibril formed at 4 degrees (Sc4)
Summary for 9XBN
| Entry DOI | 10.2210/pdb9xbn/pdb |
| Related | 9XBK 9XBL 9XBM 9XBO 9XBP |
| EMDB information | 66706 |
| Descriptor | Eukaryotic peptide chain release factor GTP-binding subunit (1 entity in total) |
| Functional Keywords | yeast, sup35nm, amyloid, protein fibril |
| Biological source | Saccharomyces cerevisiae (brewer's yeast) |
| Total number of polymer chains | 5 |
| Total formula weight | 147567.23 |
| Authors | |
| Primary citation | Tanaka, M.,Nomura, T.,Boyer, D.,Komi, Y.,Ge, P.,Maillard, R.A.,Rodriguez, P.,Yamagata, A.,Shirouzu, M.,Legname, G.,Samori, B.,Eisenberg, D. How Sup35 monomer conformation and amyloid fibril polymorphism determine yeast strain phenotypes. Res Sq, 2025 Cited by PubMed Abstract: In the [ ] prion system, the yeast prion protein Sup35 can form structurally distinct amyloid fibrils that lead to distinct transmissible prion states, or strains. However, our understanding of how different Sup35 fibril structures arise and translate to phenotypic variations is limited. Here, using cryo-EM and single-monomer force spectroscopy with optical tweezers, we reveal the structural basis of yeast prion propagation in four wild-type and S17R mutant variants of Sup35 that underlie different [ ] strains. Cryo-EM structures show that the four variants form strikingly distinct fibril structures, which exhibit varying stability and chaperone-accessibility. Force spectroscopy suggests the different distinct fibril structures are derived from distinct monomer conformational ensembles. Further, cryo-EM structures indicate that prion strain strength is correlated with enhanced fibril propagation caused by a combination of low fibril stability and a large separation between the Sup35 fibril core and the Ssa1/Sis1 chaperone-binding region. These results provide a structure-based mechanism for the yeast prion strain phenomenon with implications for understanding amyloid propagation in human neurodegenerative diseases. PubMed: 41282265DOI: 10.21203/rs.3.rs-7945345/v1 PDB entries with the same primary citation |
| Experimental method | ELECTRON MICROSCOPY (3.1 Å) |
Structure validation
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