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9WFF

Cryo-EM structure of the human Erlin2 oligomer

9WFF の概要
エントリーDOI10.2210/pdb9wff/pdb
EMDBエントリー65927
分子名称Erlin-2, 2-acetamido-2-deoxy-beta-D-glucopyranose (3 entities in total)
機能のキーワードerlin2 oligomer, membrane protein
由来する生物種Homo sapiens (human)
タンパク質・核酸の鎖数26
化学式量合計825670.69
構造登録者
Qian, H.W.,Jia, X.X. (登録日: 2025-08-21, 公開日: 2026-01-21)
主引用文献Jia, X.,Liu, G.,Li, H.,Qian, H.
Structural insights into the organization of the human Erlin complex.
J Mol Cell Biol, 2026
Cited by
PubMed Abstract: The endoplasmic reticulum (ER) lipid raft proteins (Erlins) belong to the stomatin-prohibitin-flotillin-HflC/K (SPFH) family and form highly oligomeric platforms that mediate the degradation of activated inositol 1,4,5-trisphosphate receptors by facilitating their interaction with the E3 ligase RNF170. However, the molecular mechanisms underlying this process remain unclear. Here, we successfully reconstituted the Erlin1-Erlin2 complex and its complex with RNF170 by overexpressing these components in HEK293F cells. We also isolated the Erlin2 oligomer by solely expressing Erlin2 in the cells. Using cryo-EM, we determined the structures of the Erlin1-Erlin2 complex, Erlin1-Erlin2-RNF170 complex, and Erlin2 oligomer at resolutions of 3.29 Å, 3.05 Å, and 2.12 Å, respectively. Both the Erlin1-Erlin2 complex and the Erlin2 oligomer exhibit similar cage-like architectures, with the Erlin1-Erlin2 complex containing 13 pairs of Erlin1 and Erlin2 subunits, whereas the Erlin2 oligomer comprises 26 Erlin2. Although RNF170 was clearly identified during protein purification, it was invisible in the final 3D reconstruction, suggesting a high degree of flexibility between RNF170 and the Erlin complex. Multiple water molecules were identified in the Erlin2 oligomer, underscoring their critical roles in facilitating the high degree of oligomerization of the Erlin2 complex. Taken together, our structural investigation elucidates the molecular basis for the assembly of the Erlin complex and provides a framework for further investigation.
PubMed: 41481136
DOI: 10.1093/jmcb/mjaf060
主引用文献が同じPDBエントリー
実験手法
ELECTRON MICROSCOPY (2.12 Å)
構造検証レポート
Validation report summary of 9wff
検証レポート(詳細版)ダウンロードをダウンロード

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件を2026-04-08に公開中

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