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9RJ1

S-methylcysteine synthase (BSAS4) from common bean in complex with PLP, BEZ, and GOL

Summary for 9RJ1
Entry DOI10.2210/pdb9rj1/pdb
DescriptorCysteine synthase, BENZOIC ACID, CHLORIDE ION, ... (6 entities in total)
Functional Keywordscysteine synthase, s-methylcysteine synthase, o-acetylserine sulfhydrylase, beta-substituted alanine synthase, transferase
Biological sourcePhaseolus vulgaris
Total number of polymer chains1
Total formula weight35142.72
Authors
Witek, W.,Jaskolski, M.,Ruszkowski, M. (deposition date: 2025-06-12, release date: 2025-12-03)
Primary citationLu, Z.,Witek, W.,Ruszkowski, M.,Imiolczyk, B.,Paulish, N.,Joshi, J.,Jaskolski, M.,Marsolais, F.
Benzoic and salicylic acids inhibit beta-substituted alanine synthase 4;1 in common bean.
Plant Physiol., 199:-, 2025
Cited by
PubMed Abstract: The nutritionally essential sulfur amino acids, methionine and cysteine, are present at suboptimal levels in legumes, such as common bean (Phaseolus vulgaris L.). β-Substituted alanine synthase 4;1 (BSAS4;1) is the major isoform of cytosolic cysteine synthase present in the developing seeds of common bean. There is evidence that in addition to cysteine, this enzyme is also involved in the biosynthesis of the non-proteinogenic amino acid S-methylcysteine, which accumulates in the form of a γ-glutamyl dipeptide. Here, we report the high-resolution structure of recombinant BSAS4;1. Unexpectedly, the crystal structure showed the presence of a molecule of benzoic acid near the active site, which appeared to have been co-purified from Escherichia coli. Kinetic analysis indicated that benzoic acid acts as a competitive inhibitor of BSAS4;1 with respect to O-acetylserine. IC50 values for benzoic acid and the structurally related salicylic acid were both equal to 0.6 mm. Using developing cotyledons grown in vitro, quantification of the incorporation of 13C3- and 15N-labeled serine into cysteine and downstream metabolites indicated that benzoic acid effectively inhibited cysteine biosynthesis in vivo at a concentration of 1.2 mm. The results of experiments tracking the incorporation of 13C-labeled sodium thiomethoxide provided further evidence that BSAS4;1 may be involved in the formation of free S-methylcysteine, through the condensation of O-acetylserine with methanethiol.
PubMed: 41051304
DOI: 10.1093/plphys/kiaf485
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (1.6 Å)
Structure validation

245663

数据于2025-12-03公开中

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