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9LNH

Crystal structure of Peroxiredoxin I in complex with compound LC-PDin20

これはPDB形式変換不可エントリーです。
9LNH の概要
エントリーDOI10.2210/pdb9lnh/pdb
分子名称Peroxiredoxin-1, (2~{S})-2-[[(2~{R},4~{a}~{S},6~{a}~{R},6~{a}~{S},14~{a}~{S},14~{b}~{R})-2,4~{a},6~{a},6~{a},9,14~{a}-hexamethyl-10-oxidanyl-11-oxidanylidene-1,3,4,5,6,13,14,14~{b}-octahydropicen-2-yl]carbamoylamino]butanoic acid (3 entities in total)
機能のキーワードcelastrol derivative, prdx1 inhibitor, oxidoreductase
由来する生物種Homo sapiens (human)
タンパク質・核酸の鎖数2
化学式量合計39224.86
構造登録者
Wang, Z.,Luo, C. (登録日: 2025-01-21, 公開日: 2025-07-09, 最終更新日: 2025-07-23)
主引用文献Chen, S.,Wang, Z.,Gao, J.,Wang, Y.,Liang, J.,Zhu, Y.,Xu, H.,Chen, K.,Jin, L.,Zhang, H.,Xiong, H.,Luo, C.
Rapid Discovery of Celastrol Derivatives as Potent and Selective PRDX1 Inhibitors via Microplate-Based Parallel Compound Library and In Situ Screening.
J.Med.Chem., 68:13609-13627, 2025
Cited by
PubMed Abstract: Celastrol has been identified as a reactive oxygen species (ROS) elevator that reduces cancer cell proliferation by inhibiting peroxiredoxin (PRDX) activity, albeit with poor selectivity. We describe a semiautomated and microplate-based parallel compound library approach leading to the rapid discovery of celastrol derivatives that are potent and selective PRDX1 inhibitors. Amide coupling and the urea bond forming reactions were used to construct a 2720-member celastrol derivative library, followed by PRDX1 enzyme inhibition assay screening, leading to the rapid identification of a series of celastrol derivatives demonstrating promising PRDX1 inhibition activity. Compound displayed the best anti-PRDX1 activity (IC = 0.042 μM) with selectivity toward the PRDX family, as well as good antiproliferative activity against colorectal cancer cells. A cocrystal structure of PRDX1 with and molecular docking studies provided insight into the binding mode of the inhibitors with PRDX1, aiding in the structure-based design of future PRDX1 inhibitors.
PubMed: 40546088
DOI: 10.1021/acs.jmedchem.5c00433
主引用文献が同じPDBエントリー
実験手法
X-RAY DIFFRACTION (1.63 Å)
構造検証レポート
Validation report summary of 9lnh
検証レポート(詳細版)ダウンロードをダウンロード

252091

件を2026-04-15に公開中

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