9C4C

The structure of two MntR dimers bound to the native mnep promoter sequence

9C4C の概要

• エントリーDOI: 10.2210/pdb9c4c/pdb
• EMDBエントリー: 45181
• 分子名称: DNA (39-MER), DNA (38-MER), HTH-type transcriptional regulator MntR, ... (4 entities in total)
• 機能のキーワード: manganese, metal ion homeostasis, transcription regulation, transcription activation, cooperative binding, gene regulation
• 由来する生物種: Bacillus subtilis; 詳細
• タンパク質・核酸の鎖数: 6
• 化学式量合計: 91273.38

構造登録者

Shi, H.,Fu, Y.,Glasfeld, A.,Ahuja, S. (登録日: 2024-06-04, 公開日: 2024-08-14, 最終更新日: 2025-05-28)

主引用文献

Shi, H.,Fu, Y.,Kodyte, V.,Andreas, A.,Sachla, A.J.,Miller, K.,Shrestha, R.,Helmann, J.D.,Glasfeld, A.,Ahuja, S.
Structural basis for transcription activation through cooperative recruitment of MntR.
Nat Commun, 16:2204-2204, 2025

PubMed Abstract: Bacillus subtilis MntR is a dual regulatory protein that responds to heightened Mn availability in the cell by both repressing the expression of uptake transporters and activating the expression of efflux proteins. Recent work indicates that, in its role as an activator, MntR binds several sites upstream of the genes encoding Mn exporters, leading to a cooperative response to manganese. Here, we use cryo-EM to explore the molecular basis of gene activation by MntR and report a structure of four MntR dimers bound to four 18-base pair sites across an 84-base pair regulatory region of the mneP promoter. Our structures, along with solution studies including mass photometry and in vivo transcription assays, reveal that MntR dimers employ polar and non-polar contacts to bind cooperatively to an array of low-affinity DNA-binding sites. These results reveal the molecular basis for cooperativity in the activation of manganese efflux.

PubMed: 40044701
DOI: 10.1038/s41467-025-57412-6

実験手法

ELECTRON MICROSCOPY (3.09 Å)