8YNA

Cryo-EM structure of histamine H4 receptor in complex with immepip and Gi

これはPDB形式変換不可エントリーです。

8YNA の概要

• エントリーDOI: 10.2210/pdb8yna/pdb
• EMDBエントリー: 39420
• 分子名称: Guanine nucleotide-binding protein G(i) subunit alpha-1, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... (7 entities in total)
• 機能のキーワード: gpcr, signaling protein
• 由来する生物種: Homo sapiens (human); 詳細
• タンパク質・核酸の鎖数: 5
• 化学式量合計: 190755.19

構造登録者

Zhang, X.,Liu, G.,Li, X.,Gong, W. (登録日: 2024-03-10, 公開日: 2024-10-09, 最終更新日: 2024-11-20)

主引用文献

Zhang, X.,Liu, G.,Zhong, Y.N.,Zhang, R.,Yang, C.C.,Niu, C.,Pu, X.,Sun, J.,Zhang, T.,Yang, L.,Zhang, C.,Li, X.,Shen, X.,Xiao, P.,Sun, J.P.,Gong, W.
Structural basis of ligand recognition and activation of the histamine receptor family.
Nat Commun, 15:8296-8296, 2024

PubMed Abstract: Histamine is a biogenic amine that is critical in various physiological and pathophysiological processes, including but not limited to allergic reactions, wakefulness, gastric acid secretion and neurotransmission. Here, we determine 9 cryo-electron microscopy (cryo-EM) structures of the 4 histamine receptors in complex with four different G protein subtypes, with endogenous or synthetic agonists bound. Inside the ligand pocket, we identify key motifs for the recognition of histamine, the distinct binding orientations of histamine and three subpockets that facilitate the design of specific ligands. In addition, we also identify key residues responsible for the selectivity of immethridine. Moreover, we reveal distinct structural features as determinants of Gq vs. Gs or Gs vs. Gi coupling differences among the histamine receptors. Our study provides a structural framework for understanding the ligand recognition and G protein coupling of all 4 histamine receptors, which may facilitate the rational design of ligands targeting these receptors.

PubMed: 39333117
DOI: 10.1038/s41467-024-52585-y

実験手法

ELECTRON MICROSCOPY (2.63 Å)