8E01

Structure of engineered nano-cage fusion protein

Summary for 8E01

• Entry DOI: 10.2210/pdb8e01/pdb
• EMDB information: 27812
• Descriptor: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (1 entity in total)
• Functional Keywords: nano-cage, self-assembly, fusion protein, protein binding
• Biological source: Thermotoga maritima
• Total number of polymer chains: 1
• Total formula weight: 23915.99

Authors

Moustafa, I.M.,Hafenstein, S.L. (deposition date: 2022-08-08, release date: 2022-11-16, Last modification date: 2022-12-28)

Primary citation

Patel, D.R.,Minns, A.M.,Sims, D.G.,Field, C.J.,Kerr, A.E.,Heinly, T.,Luley, E.H.,Rossi, R.M.,Bator, C.,Mostafa, I.M.,Hafenstein, S.L.,Lindner, S.E.,Sutton, T.C.
Intranasal SARS-CoV-2 RBD decorated nanoparticle vaccine enhances viral clearance in the Syrian hamster model.
Biorxiv, 2022

PubMed Abstract: Multiple vaccines have been developed and licensed for SARS-CoV-2. While these vaccines reduce disease severity, they do not prevent infection, and SARS-CoV-2 continues to spread and evolve. To prevent infection and limit transmission, vaccines must be developed that induce immunity in the respiratory tract. Therefore, we performed proof-of-principle vaccination studies with an intranasal nanoparticle vaccine against SARS-CoV-2. The vaccine candidate consisted of the self-assembling 60-subunit I3-01 protein scaffold covalently decorated with the SARS-CoV-2 receptor binding domain (RBD) using the SpyCatcher-SpyTag system. We verified the intended antigen display features by reconstructing the I3-01 scaffold to 3.4A using cryo-EM, and then demonstrated that the scaffold was highly saturated when grafted with RBD. Using this RBD-grafted SpyCage scaffold (RBD+SpyCage), we performed two unadjuvanted intranasal vaccination studies in the "gold-standard" preclinical Syrian hamster model. Hamsters received two vaccinations 28 days apart, and were then challenged 28 days post-boost with SARS-CoV-2. The initial study focused on assessing the immunogenicity of RBD+SpyCage, which indicated that vaccination of hamsters induced a non-neutralizing antibody response that enhanced viral clearance but did not prevent infection. In an expanded study, we demonstrated that covalent bonding of RBD to the scaffold was required to induce an antibody response. Consistent with the initial study, animals vaccinated with RBD+SpyCage more rapidly cleared SARS-CoV-2 from both the upper and lower respiratory tract. These findings demonstrate the intranasal SpyCage vaccine platform can induce protection against SARS-CoV-2 and, with additional modifications to improve immunogenicity, is a versatile platform for the development of intranasal vaccines targeting respiratory pathogens.

PubMed: 36324809
DOI: 10.1101/2022.10.27.514054

Experimental method

ELECTRON MICROSCOPY (3.4 Å)