7Z6X

Complex of E. coli LolA R43L mutant and lipoprotein

Summary for 7Z6X

• Entry DOI: 10.2210/pdb7z6x/pdb
• Related: 7Z6W
• Descriptor: Outer-membrane lipoprotein carrier protein, [(2~{S})-3-[(2~{S})-3-azanyl-2-(hexadecanoylamino)-3-oxidanylidene-propyl]sulfanyl-2-hexadecanoyloxy-propyl] hexadecanoate (3 entities in total)
• Functional Keywords: lipoprotein trafficking, periplasmic chaperone, transport protein
• Biological source: Escherichia coli K-12
• Total number of polymer chains: 1
• Total formula weight: 22395.01

Authors

Kaplan, E.,Greene, N.P.,Koronakis, V. (deposition date: 2022-03-14, release date: 2022-09-07, Last modification date: 2024-01-31)

Primary citation

Kaplan, E.,Greene, N.P.,Jepson, A.E.,Koronakis, V.
Structural basis of lipoprotein recognition by the bacterial Lol trafficking chaperone LolA.
Proc.Natl.Acad.Sci.USA, 119:e2208662119-e2208662119, 2022

PubMed Abstract: In gram-negative bacteria, lipoproteins are vital structural components of the outer membrane (OM) and crucial elements of machineries central to the physiology of the cell envelope. A dedicated apparatus, the Lol system, is required for the correct localization of OM lipoproteins and is essential for viability. The periplasmic chaperone LolA is central to this trafficking pathway, accepting triacylated lipoproteins from the inner membrane transporter LolCDE, before carrying them across the periplasm to the OM receptor LolB. Here, we report a crystal structure of liganded LolA, generated in vivo, revealing the molecular details of lipoprotein association. The structure highlights how LolA, initially primed to receive lipoprotein by interaction with LolC, further opens to accommodate the three ligand acyl chains in a precise conformation within its cavity. LolA forms extensive interactions with the acyl chains but not with any residue of the cargo, explaining the chaperone's ability to transport structurally diverse lipoproteins. Structural characterization of a ligandedLolA variant incapable of lipoprotein release reveals aberrant association, demonstrating the importance of the LolCDE-coordinated, sequential opening of LolA for inserting lipoprotein in a manner productive for subsequent trafficking. Comparison with existing structures of LolA in complex with LolC or LolCDE reveals substantial overlap of the lipoprotein and LolC binding sites within the LolA cavity, demonstrating that insertion of lipoprotein acyl chains physically disengages the chaperone protein from the transporter by perturbing interaction with LolC. Taken together, our data provide a key step toward a complete understanding of a fundamentally important trafficking pathway.

PubMed: 36037338
DOI: 10.1073/pnas.2208662119

Experimental method

X-RAY DIFFRACTION (2.06 Å)