7Z6F

Crystal structure of the substrate-binding protein YejA in complex with peptide fragment

7Z6F の概要

• エントリーDOI: 10.2210/pdb7z6f/pdb
• 分子名称: YejA, degradation peptide VAL-LEU-GLY-GLU-PRO-ARG-TYR-ALA-PHE-ASN-PHE-ASN, GLYCEROL, ... (6 entities in total)
• 機能のキーワード: abc importer, peptide transporter, substrate-binding protein, transport protein
• 由来する生物種: Escherichia coli; 詳細
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 69450.83

構造登録者

Beis, K.,Qu, F. (登録日: 2022-03-11, 公開日: 2023-09-20, 最終更新日: 2025-04-02)

主引用文献

Luo, S.,Li, X.R.,Gong, X.T.,Kulikovsky, A.,Qu, F.,Beis, K.,Severinov, K.,Dubiley, S.,Feng, X.,Dong, S.H.,Nair, S.K.
Trojan horse peptide conjugates remodel the activity spectrum of clinical antibiotics.
Proc.Natl.Acad.Sci.USA, 122:e2319483121-e2319483121, 2025

PubMed Abstract: Infections caused by gram-negative pathogens continue to be a major risk to human health because of the innate antibiotic resistance endowed by their unique cell membrane architecture. Nature has developed an elegant solution to target gram-negative strains, namely by conjugating toxic antibiotic warheads to a suitable carrier to facilitate the active import of the drug to a specific target organism. Microcin C7 (McC) is a Trojan horse peptide-conjugated antibiotic that specifically targets enterobacteria by exploiting active import through oligopeptide transport systems. Here, we characterize the molecular mechanism of McC recognition by YejA, the solute binding protein of the oligopeptide transporter. Structure-guided mutational and functional analysis elucidates the determinants of substrate recognition. We demonstrate that the peptide carrier can serve as a passport for the entry of molecules that are otherwise not taken into cells. We show that peptide conjugation can remodel the antibiotic spectrum of clinically relevant parent compounds. Bioinformatics analysis reveals a broad distribution of YejA-like transporters in only the Proteobacteria, underscoring the potential for the development of Trojan horse antibiotics that are actively imported into such gram-negative bacteria.

PubMed: 39739799
DOI: 10.1073/pnas.2319483121

実験手法

X-RAY DIFFRACTION (1.65 Å)