7WHD

SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d)

7WHD の概要

• エントリーDOI: 10.2210/pdb7whd/pdb
• EMDBエントリー: 32499
• 分子名称: Spike glycoprotein, antibody ZB8 heavy chain, antibody ZB8 light chain, ... (5 entities in total)
• 機能のキーワード: sars-cov-2 spike, receptor binding domain, antibody, viral protein, viral protein-immune system complex, viral protein/immune system
• 由来する生物種: Severe acute respiratory syndrome coronavirus 2 (2019-nCoV, SARS-CoV-2); 詳細
• タンパク質・核酸の鎖数: 9
• 化学式量合計: 524188.14

構造登録者

Zeng, J.W.,Wang, X.W.,Ge, J.W.,Wang, Z.Y. (登録日: 2021-12-30, 公開日: 2023-01-18, 最終更新日: 2024-10-23)

主引用文献

Zhou, B.,Zhou, R.,Chan, J.F.,Zeng, J.,Zhang, Q.,Yuan, S.,Liu, L.,Robinot, R.,Shan, S.,Liu, N.,Ge, J.,Kwong, H.Y.,Zhou, D.,Xu, H.,Chan, C.C.,Poon, V.K.,Chu, H.,Yue, M.,Kwan, K.Y.,Chan, C.Y.,Chan, C.C.,Chik, K.K.,Du, Z.,Au, K.K.,Huang, H.,Man, H.O.,Cao, J.,Li, C.,Wang, Z.,Zhou, J.,Song, Y.,Yeung, M.L.,To, K.K.,Ho, D.D.,Chakrabarti, L.A.,Wang, X.,Zhang, L.,Yuen, K.Y.,Chen, Z.
SARS-CoV-2 hijacks neutralizing dimeric IgA for nasal infection and injury in Syrian hamsters 1 .
Emerg Microbes Infect, 12:2245921-2245921, 2023

PubMed Abstract: Prevention of robust severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) infection in nasal turbinate (NT) requires evaluation of IgA neutralizing antibodies. Here, we report the efficacy of receptor binding domain (RBD)-specific monomeric B8-mIgA1 and B8-mIgA2, and dimeric B8-dIgA1, B8-dIgA2 and TH335-dIgA1 against intranasal SARS-CoV-2 challenge in Syrian hamsters. These antibodies exhibited comparable neutralization potency against authentic virus by competing with human angiotensin converting enzyme-2 (ACE2) receptor for RBD binding. While reducing viral loads in lungs significantly, prophylactic intranasal B8-dIgA unexpectedly led to high amount of infectious viruses and extended damage in NT compared to controls. Mechanistically, B8-dIgA failed to inhibit SARS-CoV-2 cell-to-cell transmission, but was hijacked by the virus through dendritic cell-mediated trans-infection of NT epithelia leading to robust nasal infection. Cryo-EM further revealed B8 as a class II antibody binding trimeric RBDs in 3-up or 2-up/1-down conformation. Neutralizing dIgA, therefore, may engage an unexpected mode of SARS-CoV-2 nasal infection and injury.

PubMed: 37542391
DOI: 10.1080/22221751.2023.2245921

実験手法

ELECTRON MICROSCOPY (2.65 Å)