7TCY

The ubiquitin-associated domain of human thirty-eight negative kinase I

7TCY の概要

• エントリーDOI: 10.2210/pdb7tcy/pdb
• 関連するPDBエントリー: 7T8J
• 分子名称: Non-receptor tyrosine-protein kinase TNK1, FORMIC ACID, PHOSPHATE ION, ... (6 entities in total)
• 機能のキーワード: kinase, ubiquitin-associated, uba, oncoprotein, transferase
• 由来する生物種: Homo sapiens (human)
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 17882.00

構造登録者

Nawarathnage, S.,Bunn, R.D.,Stewart, C.,Doukov, T.,Moody, J.D. (登録日: 2021-12-29, 公開日: 2023-01-11, 最終更新日: 2023-12-20)

主引用文献

Nawarathnage, S.,Tseng, Y.J.,Soleimani, S.,Smith, T.,Pedroza Romo, M.J.,Abiodun, W.O.,Egbert, C.M.,Madhusanka, D.,Bunn, D.,Woods, B.,Tsubaki, E.,Stewart, C.,Brown, S.,Doukov, T.,Andersen, J.L.,Moody, J.D.
Fusion crystallization reveals the behavior of both the 1TEL crystallization chaperone and the TNK1 UBA domain.
Structure, 31:1589-1603.e6, 2023

PubMed Abstract: Human thirty-eight-negative kinase-1 (TNK1) is implicated in cancer progression. The TNK1 ubiquitin-associated (UBA) domain binds polyubiquitin and plays a regulatory role in TNK1 activity and stability. No experimentally determined molecular structure of this unusual UBA domain is available. We fused the UBA domain to the 1TEL variant of the translocation ETS leukemia protein sterile alpha motif (TELSAM) crystallization chaperone and obtained crystals diffracting as far as 1.53 Å. GG and GSGG linkers allowed the UBA to reproducibly find a productive binding mode against its host 1TEL polymer and crystallize at protein concentrations as low as 0.2 mg/mL. Our studies support a mechanism of 1TEL fusion crystallization and show that 1TEL fusion crystals require fewer crystal contacts than traditional protein crystals. Modeling and experimental validation suggest the UBA domain may be selective for both the length and linkages of polyubiquitin chains.

PubMed: 37776857
DOI: 10.1016/j.str.2023.09.001

実験手法

X-RAY DIFFRACTION (1.54 Å)