7PX9

Substrate-engaged mycobacterial Proteasome-associated ATPase - focused 3D refinement (state A)

This is a non-PDB format compatible entry.

Summary for 7PX9

• Entry DOI: 10.2210/pdb7px9/pdb
• EMDB information: 13694
• Descriptor: AAA ATPase forming ring-shaped complexes, Prokaryotic ubiquitin-like protein Pup, ADENOSINE-5'-TRIPHOSPHATE, ... (5 entities in total)
• Functional Keywords: aaa motor, atpase, mycobacterium, proteasome activator, 20s cp, cytosolic protein
• Biological source: Mycobacterium tuberculosis; More
• Total number of polymer chains: 7
• Total formula weight: 415107.63

Authors

Jomaa, A.,Kavalchuk, M.,Weber-Ban, E. (deposition date: 2021-10-08, release date: 2022-01-19, Last modification date: 2024-07-17)

Primary citation

Kavalchuk, M.,Jomaa, A.,Muller, A.U.,Weber-Ban, E.
Structural basis of prokaryotic ubiquitin-like protein engagement and translocation by the mycobacterial Mpa-proteasome complex.
Nat Commun, 13:276-276, 2022

PubMed Abstract: Proteasomes are present in eukaryotes, archaea and Actinobacteria, including the human pathogen Mycobacterium tuberculosis, where proteasomal degradation supports persistence inside the host. In mycobacteria and other members of Actinobacteria, prokaryotic ubiquitin-like protein (Pup) serves as a degradation tag post-translationally conjugated to target proteins for their recruitment to the mycobacterial proteasome ATPase (Mpa). Here, we use single-particle cryo-electron microscopy to determine the structure of Mpa in complex with the 20S core particle at an early stage of pupylated substrate recruitment, shedding light on the mechanism of substrate translocation. Two conformational states of Mpa show how substrate is translocated stepwise towards the degradation chamber of the proteasome core particle. We also demonstrate, in vitro and in vivo, the importance of a structural feature in Mpa that allows formation of alternating charge-complementary interactions with the proteasome resulting in radial, rail-guided movements during the ATPase conformational cycle.

PubMed: 35022401
DOI: 10.1038/s41467-021-27787-3

Experimental method

ELECTRON MICROSCOPY (3.8 Å)