7NG9

Trimeric efflux pump Klebsiella TolC

Summary for 7NG9

• Entry DOI: 10.2210/pdb7ng9/pdb
• EMDB information: 12310
• Descriptor: Outer membrane channel protein (1 entity in total)
• Functional Keywords: efflux pump, trimer, membrane protein
• Biological source: Klebsiella quasipneumoniae
• Total number of polymer chains: 3
• Total formula weight: 162176.03

Authors

Webby, M.N.,Housden, N.G.,Kleanthous, C. (deposition date: 2021-02-08, release date: 2021-06-30, Last modification date: 2024-07-10)

Primary citation

Housden, N.G.,Webby, M.N.,Lowe, E.D.,El-Baba, T.J.,Kaminska, R.,Redfield, C.,Robinson, C.V.,Kleanthous, C.
Toxin import through the antibiotic efflux channel TolC.
Nat Commun, 12:4625-4625, 2021

PubMed Abstract: Bacteria often secrete diffusible protein toxins (bacteriocins) to kill bystander cells during interbacterial competition. Here, we use biochemical, biophysical and structural analyses to show how a bacteriocin exploits TolC, a major outer-membrane antibiotic efflux channel in Gram-negative bacteria, to transport itself across the outer membrane of target cells. Klebicin C (KlebC), a rRNase toxin produced by Klebsiella pneumoniae, binds TolC of a related species (K. quasipneumoniae) with high affinity through an N-terminal, elongated helical hairpin domain common amongst bacteriocins. The KlebC helical hairpin opens like a switchblade to bind TolC. A cryo-EM structure of this partially translocated state, at 3.1 Å resolution, reveals that KlebC associates along the length of the TolC channel. Thereafter, the unstructured N-terminus of KlebC protrudes beyond the TolC iris, presenting a TonB-box sequence to the periplasm. Association with proton-motive force-linked TonB in the inner membrane drives toxin import through the channel. Finally, we demonstrate that KlebC binding to TolC blocks drug efflux from bacteria. Our results indicate that TolC, in addition to its known role in antibiotic export, can function as a protein import channel for bacteriocins.

PubMed: 34330923
DOI: 10.1038/s41467-021-24930-y

Experimental method

ELECTRON MICROSCOPY (3.3 Å)