7K7G

nucleosome and Gal4 complex

7K7G の概要

• エントリーDOI: 10.2210/pdb7k7g/pdb
• EMDBエントリー: 22698
• 分子名称: Histone H3, Histone H4, Histone H2A.1, ... (8 entities in total)
• 機能のキーワード: dna binding protein, dna binding protein-dna complex, dna binding protein/dna
• 由来する生物種: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast); 詳細
• タンパク質・核酸の鎖数: 11
• 化学式量合計: 206630.44

構造登録者

Ruifang, G.,Yawen, B. (登録日: 2020-09-22, 公開日: 2021-03-31, 最終更新日: 2024-11-20)

主引用文献

Guan, R.,Lian, T.,Zhou, B.R.,He, E.,Wu, C.,Singleton, M.,Bai, Y.
Structural and dynamic mechanisms of CBF3-guided centromeric nucleosome formation.
Nat Commun, 12:1763-1763, 2021

PubMed Abstract: Accurate chromosome segregation relies on the specific centromeric nucleosome-kinetochore interface. In budding yeast, the centromere CBF3 complex guides the deposition of CENP-A, an H3 variant, to form the centromeric nucleosome in a DNA sequence-dependent manner. Here, we determine the structures of the centromeric nucleosome containing the native CEN3 DNA and the CBF3core bound to the canonical nucleosome containing an engineered CEN3 DNA. The centromeric nucleosome core structure contains 115 base pair DNA including a CCG motif. The CBF3core specifically recognizes the nucleosomal CCG motif through the Gal4 domain while allosterically altering the DNA conformation. Cryo-EM, modeling, and mutational studies reveal that the CBF3core forms dynamic interactions with core histones H2B and CENP-A in the CEN3 nucleosome. Our results provide insights into the structure of the budding yeast centromeric nucleosome and the mechanism of its assembly, which have implications for analogous processes of human centromeric nucleosome formation.

PubMed: 33741944
DOI: 10.1038/s41467-021-21985-9

実験手法

ELECTRON MICROSCOPY (4.2 Å)