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6X5I

Cryo-EM of peptide-like filament of 1-KMe3

This is a non-PDB format compatible entry.
Summary for 6X5I
Entry DOI10.2210/pdb6x5i/pdb
EMDB information22051
Descriptor1-KMe3 peptide-like fibril (1 entity in total)
Functional Keywordspeptide-like fibril, helical symmetry, protein fibril
Biological sourceHomo sapiens
Total number of polymer chains70
Total formula weight61667.55
Authors
Wang, F.,Feng, Z.,Xu, B.,Egelman, E.H. (deposition date: 2020-05-26, release date: 2020-06-03, Last modification date: 2020-08-26)
Primary citationFeng, Z.,Wang, H.,Wang, F.,Oh, Y.,Berciu, C.,Cui, Q.,Egelman, E.H.,Xu, B.
Artificial Intracellular Filaments.
Cell Rep Phys Sci, 1:-, 2020
Cited by
PubMed Abstract: Intracellular protein filaments are ubiquitous for cellular functions, but forming bona fide biomimetic intracellular filaments of small molecules in living cells remains elusive. Here, we report the formation of self-limiting intracellular filaments of a small peptide via enzymatic morphological transition of a phosphorylated and trimethylated heterochiral tetrapeptide. Enzymatic dephosphorylation reduces repulsive intermolecular electrostatic interactions and converts the peptidic nanoparticles into filaments, which exhibit distinct types of cross-β structures with either C7 or C2 symmetries, with the hydrophilic C-terminal residues at the periphery of the helix. Macromolecular crowding promotes the peptide filaments to form bundles, which extend from the plasma membrane to nuclear membrane and hardly interact with endogenous components, including cytoskeletons. Stereochemistry and post-translational modification (PTM) of peptides are critical for generating the intracellular bundles. This work may offer a way to gain lost functions or to provide molecular insights for understanding normal and aberrant intracellular filaments.
PubMed: 32776017
DOI: 10.1016/j.xcrp.2020.100085
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (4.3 Å)
Structure validation

230744

數據於2025-01-29公開中

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