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6VMI

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

これはPDB形式変換不可エントリーです。
6VMI の概要
エントリーDOI10.2210/pdb6vmi/pdb
EMDBエントリー21233 21242
分子名称12s rRNA, 28S ribosomal protein S18b, mitochondrial, 28S ribosomal protein S18c, mitochondrial, ... (92 entities in total)
機能のキーワードmitochondrial elongation factor-g1, 55s ribosome, ribosome
由来する生物種Homo sapiens (Human)
詳細
タンパク質・核酸の鎖数91
化学式量合計3077924.61
構造登録者
Sharma, M.R.,Koripella, R.K.,Agrawal, R.K. (登録日: 2020-01-28, 公開日: 2020-08-05, 最終更新日: 2024-10-30)
主引用文献Koripella, R.K.,Sharma, M.R.,Bhargava, K.,Datta, P.P.,Kaushal, P.S.,Keshavan, P.,Spremulli, L.L.,Banavali, N.K.,Agrawal, R.K.
Structures of the human mitochondrial ribosome bound to EF-G1 reveal distinct features of mitochondrial translation elongation.
Nat Commun, 11:3830-3830, 2020
Cited by
PubMed Abstract: The mammalian mitochondrial ribosome (mitoribosome) and its associated translational factors have evolved to accommodate greater participation of proteins in mitochondrial translation. Here we present the 2.68-3.96 Å cryo-EM structures of the human 55S mitoribosome in complex with the human mitochondrial elongation factor G1 (EF-G1) in three distinct conformational states, including an intermediate state and a post-translocational state. These structures reveal the role of several mitochondria-specific (mito-specific) mitoribosomal proteins (MRPs) and a mito-specific segment of EF-G1 in mitochondrial tRNA (tRNA) translocation. In particular, the mito-specific C-terminal extension in EF-G1 is directly involved in translocation of the acceptor arm of the A-site tRNA. In addition to the ratchet-like and independent head-swiveling motions exhibited by the small mitoribosomal subunit, we discover significant conformational changes in MRP mL45 at the nascent polypeptide-exit site within the large mitoribosomal subunit that could be critical for tethering of the elongating mitoribosome onto the inner-mitochondrial membrane.
PubMed: 32737313
DOI: 10.1038/s41467-020-17715-2
主引用文献が同じPDBエントリー
実験手法
ELECTRON MICROSCOPY (2.96 Å)
構造検証レポート
Validation report summary of 6vmi
検証レポート(詳細版)ダウンロードをダウンロード

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件を2026-02-11に公開中

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