6JP2

Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus

Summary for 6JP2

DescriptorPyrrolysyl-tRNA synthetase (2 entities in total)
Functional Keywordsaminoacyl-trna synthetase, trna, pyrrolysyl-trna synthetase, non-natural amino acids, translation, ligase
Biological sourceCandidatus Methanomethylophilus alvus
Total number of polymer chains4
Total molecular weight124513.47
Authors
Yanagisawa, T.,Kuratani, M.,Yokoyama, S. (deposition date: 2019-03-25, release date: 2019-05-22)
Primary citation
Yanagisawa, T.,Kuratani, M.,Yokoyama, S.
Crystal structure of M. alvus pyrrolysyl-tRNA synthetase at 2.27 Angstroms resolution.
To Be Published,
Experimental method
X-RAY DIFFRACTION (2.272 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.2577 0.6% 1.9% 6.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 6jp2
no rotation
Molmil generated image of 6jp2
rotated about x axis by 90°
Molmil generated image of 6jp2
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 6jp2
no rotation
Molmil generated image of 6jp2
rotated about x axis by 90°
Molmil generated image of 6jp2
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (6jp2.pdb2.gz [91.34 KB])
Coordinate files for Biological unit (6jp2.pdb1.gz [92.32 KB])