Dengue-RdRp3-inhibitor complex co-crystallisation

Summary for 6H80

DescriptorGenome polyprotein, 2-(4-methoxy-3-thiophen-2-yl-phenyl)ethanoic acid, ZINC ION, ... (5 entities in total)
Functional Keywordsdengue virus; crystallization screen; rna-dependent rna polymerase; flavivirus; antiviral drug-discovery, viral protein
Biological sourceDengue virus type 3 (strain Sri Lanka/1266/2000) (DENV-3)
Total number of polymer chains1
Total molecular weight74534.58
Talapatra, S.K.,Kozielski, F. (deposition date: 2018-07-31, release date: 2019-03-13)
Primary citation
Riccio, F.,Talapatra, S.K.,Oxenford, S.,Angell, R.,Mazzon, M.,Kozielski, F.
Development and validation of RdRp Screen, a crystallization screen for viral RNA-dependent RNA polymerases.
Biol Open, 8:-, 2019
PubMed: 30602529 (PDB entries with the same primary citation)
DOI: 10.1242/bio.037663
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.245180 7.7% 5.7%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 6h80
no rotation
Molmil generated image of 6h80
rotated about x axis by 90°
Molmil generated image of 6h80
rotated about y axis by 90°