6C7X

Carbonic anhydrase 2 in complex with 2-chloro-5'-O-sulfamoyladenosine

6C7X の概要

• エントリーDOI: 10.2210/pdb6c7x/pdb
• 分子名称: Carbonic anhydrase 2, ZINC ION, 2-chloro-5'-O-sulfamoyladenosine, ... (5 entities in total)
• 機能のキーワード: human carbonic anhydrase ii; inhibitor; natural product, lyase, lyase-inhibitor complex, lyase/inhibitor
• 由来する生物種: Homo sapiens (Human)
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 29758.23

構造登録者

Peat, T.S.,Mujumdar, P.,Poulsen, S.A. (登録日: 2018-01-23, 公開日: 2018-05-23, 最終更新日: 2023-10-04)

主引用文献

Mujumdar, P.,Bua, S.,Supuran, C.T.,Peat, T.S.,Poulsen, S.A.
Synthesis, structure and bioactivity of primary sulfamate-containing natural products.
Bioorg. Med. Chem. Lett., 28:3009-3013, 2018

PubMed Abstract: Here we report the synthesis of natural products (NPs) 5'-O-sulfamoyl adenosine 1 and 5'-O-sulfamoyl-2-chloroadenosine 2. As primary sulfamates these compounds represent an uncommon class of NPs, furthermore there are few NPs known that contain a NS bond. Compounds 1 and 2 were evaluated for inhibition of carbonic anhydrases (CA), a metalloenzyme family where the primary sulfamate is known to coordinate to the active site zinc and form key hydrogen bonds with adjacent CA active site residues. Both NPs were good to moderate CA inhibitors, with compound 2 a 20-50-fold stronger CA inhibitor (K values 65-234 nM) than compound 1. The protein X-ray crystal structures of 1 and 2 in complex with CA II show that it is not the halogen-hydrophobic interactions that give compound 2 a greater binding energy but a slight movement in orientation of the ribose ring that allows better hydrogen bonds to CA residues. Compounds 1 and 2 were further investigated for antimicrobial activity against a panel of microbes relevant to human health, including Gram-negative bacteria (4 strains), Gram-positive bacteria (1 strain) and yeast (2 strains). Antimicrobial activity and selectivity was observed. The minimum inhibitory concentration (MIC) of NP 1 was 10 µM against Gram-positive Staphylococcus aureus and NP 2 was 5 µM against Gram-negative Escherichia coli. This is the first time that NP primary sulfamates have been assessed for inhibition and binding to CAs, with systematic antimicrobial activity studies also reported.

PubMed: 29685656
DOI: 10.1016/j.bmcl.2018.04.038

実験手法

X-RAY DIFFRACTION (1.5 Å)