6BQ2

Crystal structure of Medicago truncatula Thermospermine Synthase (MtTSPS)

6BQ2 の概要

• エントリーDOI: 10.2210/pdb6bq2/pdb
• 分子名称: Thermospermine synthase ACAULIS protein, MAGNESIUM ION, 1,2-ETHANEDIOL, ... (4 entities in total)
• 機能のキーワード: polyamine biosynthesis, tetraamine, thermospermine, spermidine, aminopropyl transferase, transferase
• 由来する生物種: Medicago truncatula (Barrel medic)
• タンパク質・核酸の鎖数: 2
• 化学式量合計: 74668.78

構造登録者

Sekula, B.,Dauter, Z. (登録日: 2017-11-27, 公開日: 2018-02-28, 最終更新日: 2023-10-04)

主引用文献

Sekula, B.,Dauter, Z.
Crystal structure of thermospermine synthase fromMedicago truncatulaand substrate discriminatory features of plant aminopropyltransferases.
Biochem. J., 475:787-802, 2018

PubMed Abstract: Polyamines are linear polycationic compounds that play a crucial role in the growth and development of higher plants. One triamine (spermidine, SPD) and two tetraamine isomers (spermine, SPM, and thermospermine, TSPM) are obtained by the transfer of the aminopropyl group from decarboxylated -adenosylmethionine to putrescine and SPD. These reactions are catalyzed by the specialized aminopropyltransferases. In that respect, plants are unique eukaryotes that have independently evolved two enzymes, thermospermine synthase (TSPS), encoded by the gene , and spermine synthase, which produce TSPM and SPM, respectively. In this work, we structurally characterize the gene product, TSPS, from the model legume plant (). Six crystal structures of TSPS - one without ligands and five in complexes with either reaction substrate (SPD), reaction product (TSPM), or one of three cofactor analogs (5'-methylthioadenosine, -adenosylthiopropylamine, and adenosine) - give detailed insights into the biosynthesis of TSPM. Combined with small-angle X-ray scattering data, the crystal structures show that TSPS is a symmetric homotetramer with an interdomain eight-stranded β-barrel. Such an assembly and the presence of a hinge-like feature between N-terminal and C-terminal domains give the protein additional flexibility which potentially improves loading substrates and discarding products after the catalytic event. We also discuss the sequence and structural features around the active site of the plant aminopropyltransferases that distinguish them from each other and determine their characteristic substrate discrimination.

PubMed: 29367265
DOI: 10.1042/BCJ20170900

実験手法

X-RAY DIFFRACTION (1.68 Å)