5H5L

Structure of prostaglandin synthase D of Nilaparvata lugens

Summary for 5H5L

DescriptorGlutathione s-transferase S2, GLUTATHIONE, DI(HYDROXYETHYL)ETHER, ... (5 entities in total)
Functional Keywordsglutathione, lepidoptera, prostaglandin, prostaglandin synthase, transferase
Biological sourceNilaparvata lugens (Brown planthopper)
Total number of polymer chains2
Total molecular weight48066.88
Authors
Yamamoto, K.,Higashiura, A.,Suzuki, S.,Nakagawa, A. (deposition date: 2016-11-07, release date: 2017-09-20)
Primary citation
Yamamoto, K.,Higashiura, A.,Suzuki, M.,Aritake, K.,Urade, Y.,Nakagawa, A.
Molecular structure of a prostaglandin D synthase requiring glutathione from the brown planthopper, Nilaparvata lugens
Biochem. Biophys. Res. Commun., 492:166-171, 2017
PubMed: 28803983 (PDB entries with the same primary citation)
DOI: 10.1016/j.bbrc.2017.08.032
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.999 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.24530.3%0.6%3.3%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 5h5l
no rotation
Molmil generated image of 5h5l
rotated about x axis by 90°
Molmil generated image of 5h5l
rotated about y axis by 90°