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5H1T

Complex structure of TRIM24 PHD-bromodomain and inhibitor 1

5H1T の概要
エントリーDOI10.2210/pdb5h1t/pdb
関連するPDBエントリー5H1U 5H1V
分子名称Transcription intermediary factor 1-alpha, ZINC ION, methyl 6-azanyl-3,4-dihydro-2H-quinoline-1-carboxylate, ... (5 entities in total)
機能のキーワードtranscription, transcription inhibitor, transcription-transcription inhibitor complex, transcription/transcription inhibitor
由来する生物種Homo sapiens (Human)
細胞内の位置Nucleus : O15164
タンパク質・核酸の鎖数4
化学式量合計86429.77
構造登録者
Liu, J. (登録日: 2016-10-11, 公開日: 2017-02-22, 最終更新日: 2023-11-08)
主引用文献Liu, J.,Li, F.,Bao, H.,Jiang, Y.,Zhang, S.,Ma, R.,Gao, J.,Wu, J.,Ruan, K.
The polar warhead of a TRIM24 bromodomain inhibitor rearranges a water-mediated interaction network
FEBS J., 284:1082-1095, 2017
Cited by
PubMed Abstract: Tripartite motif-containing protein 24 (TRIM24) is closely correlated with multiple cancers, and a recent study demonstrated that the bromodomain of TRIM24 is essential for the proliferation of lethal castration-resistant prostate cancer. Here, we identify three new inhibitors of the TRIM24 bromodomain using NMR fragment-based screening. The crystal structures of two new inhibitors in complex with the TRIM24 bromodomain reveal that the water-bridged interaction network is conserved in the same fashion as those for known benzoimidazolone inhibitors. Interestingly, the polar substitution on the warhead of one new inhibitor pulls the whole ligand approximately 2 Å into the inner side pocket of the TRIM24 bromodomain, and thus exhibits a binding mode significantly different from other known bromodomain ligands. This mode provides a useful handle for further hit-to-lead evolution toward novel inhibitors of the TRIM24 bromodomain.
PubMed: 28207202
DOI: 10.1111/febs.14041
主引用文献が同じPDBエントリー
実験手法
X-RAY DIFFRACTION (1.951 Å)
構造検証レポート
Validation report summary of 5h1t
検証レポート(詳細版)ダウンロードをダウンロード

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件を2024-12-18に公開中

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