5FKI

Pseudorabies virus (PrV) nuclear egress complex proteins fitted as a hexameric lattice into a sub-tomogram average derived from focused- ion beam milled lamellae electron cryo-microscopic data

This is a large structure.

Summary for 5FKI

EMDB information3197
DescriptorUL31, UL34 protein, ZINC ION, ... (4 entities in total)
Functional Keywordsalpha-herpesvirinae, herpesvirus simplex, hsv-1, pseudorabies virus, prv, nuclear egress complex, nuclear envelope, nucleoplasmic reticulum, inner nuclear membrane, vesicle transport, nucleo-cytoplasmic transport, ryofib, focused ion beam milling, fib-sem, viral protein
Biological sourceSuid herpesvirus 1 (Pseudorabies virus)
Total number of polymer chains84
Total molecular weight2042224.21
Authors
Hagen, C.,Dent, K.C.,Zeev Ben Mordehai, T.,Vasishtan, D.,Antonin, W.,Mettenleiter, T.C.,Gruenewald, K. (deposition date: 2015-10-16, release date: 2016-03-16, Last modification date: 2019-07-03)
Primary citation
Zeev Ben Mordehai, T.,Weberruss, M.,Lorenz, M.,Cheleski, J.,Hellberg, T.,Whittle, C.,El Omari, K.,Vasishtan, D.,Dent, K.C.,Harlos, K.,Hagen, C.,Klupp, B.G.,Antonin, W.,Mettenleiter, T.C.,Gruenewald, K.
Crystal Structure of the Herpesvirus Nuclear Egress Complex Provides Insights Into Inner Nuclear Membrane Remodelling
Cell Rep., 13:2645-2652, 2015
PubMed: 26711332 (PDB entries with the same primary citation)
DOI: 10.1016/j.celrep.2015.11.008
MImport into Mendeley
Experimental method
ELECTRON MICROSCOPY (35 Å)
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Structure validation

ClashscoreRamachandran outliersSidechain outliers16 0.5%0MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures