5AHY

Halorhodopsin from Halobacterium salinarum in a new rhombohedral crystal form

5AHY の概要

• エントリーDOI: 10.2210/pdb5ahy/pdb
• 関連するPDBエントリー: 5AHZ
• 分子名称: HALORHODOPSIN, RETINAL, CHLORIDE ION, ... (5 entities in total)
• 機能のキーワード: membrane protein, transport protein, halophilic archaea, archaeal rhodopsin, light driven ion pump, retinal protein, ion transmembrane transport
• 由来する生物種: HALOBACTERIUM SALINARUM
• タンパク質・核酸の鎖数: 1
• 化学式量合計: 28593.42

構造登録者

Schreiner, M.,Schlesinger, R.,Heberle, J.,Niemann, H.H. (登録日: 2015-02-11, 公開日: 2015-04-22, 最終更新日: 2024-11-13)

主引用文献

Schreiner, M.,Schlesinger, R.,Heberle, J.,Niemann, H.H.
Structure of Halorhodopsin from Halobacterium Salinarum in a New Crystal Form that Imposes Little Restraint on the E-F Loop.
J.Struct.Biol., 190:373-, 2015

PubMed Abstract: Halorhodopsin from the halophilic archaeon Halobacterium salinarum is a membrane located light-driven chloride pump. Upon illumination Halorhodopsin undergoes a reversible photocycle initiated by the all-trans to 13-cis isomerization of the covalently bound retinal chromophore. The photocycle consists of several spectroscopically distinct intermediates. The structural basis of the chloride transport mechanism remains elusive, presumably because packing contacts have so far precluded protein conformational changes in the available crystals. With the intention to structurally characterize late photocycle intermediates by X-ray crystallography we crystallized Halorhodopsin in a new crystal form using the vesicle fusion method. In the new crystal form lateral contacts are mediated by helices A and G. Helices E and F that were suggested to perform large movements during the photocycle are almost unrestrained by packing contacts. This feature might permit the displacement of these helices without disrupting the crystal lattice. Therefore, this new crystal form might be an excellent system for the structural characterization of late Halorhodopsin photocycle intermediates by trapping or by time resolved experiments, especially at XFELs.

PubMed: 25916754
DOI: 10.1016/J.JSB.2015.04.010

実験手法

X-RAY DIFFRACTION (2.15 Å)