4YLH

Crystal structure of DpgC with bound substrate analog and Xe on oxygen diffusion pathway

Summary for 4YLH

Entry DOI	10.2210/pdb4ylh/pdb
Related	2NP9 2PG8
Descriptor	DpgC, XENON, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-4-({3-[(2-{[(3,5-DIHYDROXYPHENYL)ACETYL]AMINO}ETHYL)AMINO]-3-OXOPROPYL}AMINO)-3-HYDROXY-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE, ... (4 entities in total)
Functional Keywords	dioxygenase, xe complex, hydrolase
Biological source	Streptomyces toyocaensis
Total number of polymer chains	12
Total formula weight	592814.04
Authors	Li, K.,Di Russo, N.V.,Condurso, H.L.,Roitberg, A.E.,Bruner, S.D. (deposition date: 2015-03-05, release date: 2015-08-05, Last modification date: 2023-09-27)
Primary citation	Di Russo, N.V.,Condurso, H.L.,Li, K.,Bruner, S.D.,Roitberg, A.E. Oxygen diffusion pathways in a cofactor-independent dioxygenase. Chem Sci, 6:6341-6348, 2015 Cited by PubMed: 26508997 DOI: 10.1039/C5SC01638J PDB entries with the same primary citation
Experimental method	X-RAY DIFFRACTION (2.58 Å)

Structure validation